RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 IGLV5-52A0A0A0MRZ9 124 aa9.29□□□□□ -0.92
CTSD-201ENST00000236671 A8MUN3 132 aa9.29□□□□□ -0.92
CTSD-201ENST00000236671 RTL8CO15255 209 aa9.29□□□□□ -0.92
CTSD-201ENST00000236671 IGLV7-46A0A075B6I9 117 aa9.28□□□□□ -0.92
CTSD-201ENST00000236671 A0A1B0GVX0 72 aa9.28□□□□□ -0.92
CTSD-201ENST00000236671 Q8N9P0 234 aaPredicted RBP9.27□□□□□ -0.93
CTSD-201ENST00000236671 IGHV6-1A0A0B4J1U7 121 aa9.26□□□□□ -0.93
CTSD-201ENST00000236671 Q5VV11 94 aa9.26□□□□□ -0.93
CTSD-201ENST00000236671 ANAPC11Q9NYG5 84 aa9.26□□□□□ -0.93
CTSD-201ENST00000236671 CD164Q04900 197 aa9.25□□□□□ -0.93
CTSD-201ENST00000236671 C1orf134Q5TEV5 83 aa9.25□□□□□ -0.93
CTSD-201ENST00000236671 C1orf195Q5TG92 126 aa9.25□□□□□ -0.93
CTSD-201ENST00000236671 PLAC8Q9NZF1 115 aa9.25□□□□□ -0.93
CTSD-201ENST00000236671 ZNF861PO60384 105 aa9.24□□□□□ -0.93
CTSD-201ENST00000236671 PCOTHQ58A44 107 aa9.24□□□□□ -0.93
CTSD-201ENST00000236671 COA5Q86WW8 74 aa9.24□□□□□ -0.93
CTSD-201ENST00000236671 LIMD2Q9BT23 127 aa9.22□□□□□ -0.93
CTSD-201ENST00000236671 CDK2AP2O75956 126 aa9.21□□□□□ -0.94
CTSD-201ENST00000236671 MRPL34Q9BQ48 92 aaKnown RBP9.21□□□□□ -0.94
CTSD-201ENST00000236671 A0A087X002 238 aa9.2□□□□□ -0.94
CTSD-201ENST00000236671 NDUFS5O43920 106 aa9.2□□□□□ -0.94
CTSD-201ENST00000236671 NOTCH2NLQ7Z3S9 236 aa9.2□□□□□ -0.94
CTSD-201ENST00000236671 LRP1BQ9NZR2 4599 aa9.18□□□□□ -0.94
CTSD-201ENST00000236671 PRR15LQ9BU68 103 aa9.17□□□□□ -0.94
CTSD-201ENST00000236671 DYNC1H1Q14204 4646 aaKnown RBP9.17□□□□□ -0.94
CTSD-201ENST00000236671 A8MU10 97 aa9.14□□□□□ -0.95
CTSD-201ENST00000236671 KRTAP10-2P60368 255 aa9.14□□□□□ -0.95
CTSD-201ENST00000236671 CHKB-CPT1BH3BT56 60 aa9.14□□□□□ -0.95
CTSD-201ENST00000236671 LOC101927531A0A1B0GV80 90 aa9.13□□□□□ -0.95
CTSD-201ENST00000236671 IGLV7-43P04211 117 aa9.12□□□□□ -0.95
CTSD-201ENST00000236671 Q75L30 129 aa9.11□□□□□ -0.95
CTSD-201ENST00000236671 A0A1B0GVY2 172 aa9.1□□□□□ -0.95
CTSD-201ENST00000236671 SPINK6Q6UWN8 80 aa9.1□□□□□ -0.95
CTSD-201ENST00000236671 KRTAP13-3Q3SY46 172 aa9.09□□□□□ -0.95
CTSD-201ENST00000236671 HRES1P13985 223 aa9.08□□□□□ -0.96
CTSD-201ENST00000236671 CIRBP-AS1Q8TBR5 109 aa9.08□□□□□ -0.96
CTSD-201ENST00000236671 KIAA1109Q2LD37 5005 aa9.08□□□□□ -0.96
CTSD-201ENST00000236671 Q5W150 140 aa9.07□□□□□ -0.96
CTSD-201ENST00000236671 APOBP04114 4563 aaKnown RBP9.07□□□□□ -0.96
CTSD-201ENST00000236671 LINC01558Q9Y6Z2 57 aa9.05□□□□□ -0.96
CTSD-201ENST00000236671 SPAG11AQ6PDA7 123 aa9.05□□□□□ -0.96
CTSD-201ENST00000236671 PMAIP1Q13794 54 aa9.03□□□□□ -0.96
CTSD-201ENST00000236671 LCA10Q71F78 164 aa9.02□□□□□ -0.96
CTSD-201ENST00000236671 SSBP3-AS1Q7Z2R9 100 aa9.02□□□□□ -0.97
CTSD-201ENST00000236671 A6NED7 52 aa9.01□□□□□ -0.97
CTSD-201ENST00000236671 C8orf87E5RJ46 101 aa9.01□□□□□ -0.97
CTSD-201ENST00000236671 HSPG2P98160 4391 aa9□□□□□ -0.97
CTSD-201ENST00000236671 BIRC6Q9NR09 4857 aa8.99□□□□□ -0.97
CTSD-201ENST00000236671 FAT1Q14517 4588 aa8.98□□□□□ -0.97
CTSD-201ENST00000236671 KRTAP10-1P60331 282 aa8.97□□□□□ -0.97
CTSD-201ENST00000236671 RYR1P21817 5038 aa8.95□□□□□ -0.98
CTSD-201ENST00000236671 CDC42SE1Q9NRR8 79 aa8.95□□□□□ -0.98
CTSD-201ENST00000236671 ATP11AUNQ6ZP68 121 aa8.94□□□□□ -0.98
CTSD-201ENST00000236671 LINC00313P59037 77 aa8.93□□□□□ -0.98
CTSD-201ENST00000236671 KRTAP13-2Q52LG2 175 aa8.93□□□□□ -0.98
CTSD-201ENST00000236671 SPTSSBQ8NFR3 76 aa8.93□□□□□ -0.98
CTSD-201ENST00000236671 VPS13BQ7Z7G8 4022 aa8.92□□□□□ -0.98
CTSD-201ENST00000236671 PRR26Q8N8Z3 221 aa8.92□□□□□ -0.98
CTSD-201ENST00000236671 FAM229AH3BQW9 127 aa8.89□□□□□ -0.99
CTSD-201ENST00000236671 ACYP2P14621 99 aa8.89□□□□□ -0.99
CTSD-201ENST00000236671 SPINK7P58062 85 aa8.89□□□□□ -0.99
CTSD-201ENST00000236671 DMAC1Q96GE9 116 aa8.89□□□□□ -0.99
CTSD-201ENST00000236671 KRTAP17-1Q9BYP8 105 aa8.87□□□□□ -0.99
CTSD-201ENST00000236671 Q6ZSA8 131 aa8.87□□□□□ -0.99
CTSD-201ENST00000236671 KRTAP16-1A8MUX0 517 aa8.86□□□□□ -0.99
CTSD-201ENST00000236671 RETNLBQ9BQ08 111 aa8.86□□□□□ -0.99
CTSD-201ENST00000236671 A6NN06 94 aa8.85□□□□□ -0.99
CTSD-201ENST00000236671 IGKV2-30P06310 120 aa8.85□□□□□ -0.99
CTSD-201ENST00000236671 SEC61GP60059 68 aa8.84□□□□□ -0.99
CTSD-201ENST00000236671 KRTAP1-4P0C5Y4 121 aa8.82□□□□□ -1
CTSD-201ENST00000236671 KTN1-AS1Q86SY8 53 aa8.82□□□□□ -1
CTSD-201ENST00000236671 SMR3BP02814 79 aaPredicted RBP8.81□□□□□ -1
CTSD-201ENST00000236671 HERC2O95714 4834 aa8.8□□□□□ -1
CTSD-201ENST00000236671 ABCA13Q86UQ4 5058 aa8.76□□□□□ -1.01
CTSD-201ENST00000236671 MYCBP2O75592 4640 aa8.75□□□□□ -1.01
CTSD-201ENST00000236671 KRTAP4-5Q9BYR2 181 aa8.72□□□□□ -1.01
CTSD-201ENST00000236671 PCLOQ9Y6V0 5065 aa8.71□□□□□ -1.01
CTSD-201ENST00000236671 IGKV2D-30A0A075B6S6 120 aa8.71□□□□□ -1.01
CTSD-201ENST00000236671 A0A1B0GU69 56 aa8.68□□□□□ -1.02
CTSD-201ENST00000236671 PLA2G1BP04054 148 aaKnown RBP8.68□□□□□ -1.02
CTSD-201ENST00000236671 FLG2Q5D862 2391 aaPredicted RBP8.68□□□□□ -1.02
CTSD-201ENST00000236671 LRP1Q07954 4544 aaKnown RBP8.67□□□□□ -1.02
CTSD-201ENST00000236671 C4orf48Q5BLP8 95 aa8.67□□□□□ -1.02
CTSD-201ENST00000236671 TYMSOSQ8TAI1 123 aa8.67□□□□□ -1.02
CTSD-201ENST00000236671 C7orf65Q6ZTY9 151 aa8.66□□□□□ -1.02
CTSD-201ENST00000236671 SPINK1P00995 79 aa8.66□□□□□ -1.02
CTSD-201ENST00000236671 Q5VSD8 79 aa8.62□□□□□ -1.03
CTSD-201ENST00000236671 RBM12B-AS1Q9P1G2 102 aa8.62□□□□□ -1.03
CTSD-201ENST00000236671 SPATA8Q6RVD6 105 aa8.59□□□□□ -1.03
CTSD-201ENST00000236671 Q8N1X5 172 aa8.59□□□□□ -1.03
CTSD-201ENST00000236671 KRTAP10-4P60372 401 aaPredicted RBP8.59□□□□□ -1.03
CTSD-201ENST00000236671 PKHD1L1Q86WI1 4243 aa8.57□□□□□ -1.04
CTSD-201ENST00000236671 LINC00304Q8N9R0 145 aa8.56□□□□□ -1.04
CTSD-201ENST00000236671 RPS29P62273 56 aaKnown RBP8.55□□□□□ -1.04
CTSD-201ENST00000236671 UQCR11O14957 56 aa8.54□□□□□ -1.04
CTSD-201ENST00000236671 MIR22HGQ0VDD5 57 aa8.53□□□□□ -1.04
CTSD-201ENST00000236671 FAT3Q8TDW7 4589 aa8.52□□□□□ -1.05
CTSD-201ENST00000236671 TNXBP22105 4242 aa8.44□□□□□ -1.06
CTSD-201ENST00000236671 HERC1Q15751 4861 aa8.43□□□□□ -1.06
CTSD-201ENST00000236671 PRAC1Q96KF2 57 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms