RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 A8MU10 97 aa8.36□□□□□ -1.07
NFKB1-201ENST00000226574 TGP01266 2768 aa8.36□□□□□ -1.07
NFKB1-201ENST00000226574 CDC42SE1Q9NRR8 79 aa8.35□□□□□ -1.07
NFKB1-201ENST00000226574 HRES1P13985 223 aa8.34□□□□□ -1.07
NFKB1-201ENST00000226574 SPINK7P58062 85 aa8.34□□□□□ -1.07
NFKB1-201ENST00000226574 PRAC1Q96KF2 57 aa8.33□□□□□ -1.08
NFKB1-201ENST00000226574 A0A087X002 238 aa8.3□□□□□ -1.08
NFKB1-201ENST00000226574 NOTCH2NLQ7Z3S9 236 aa8.3□□□□□ -1.08
NFKB1-201ENST00000226574 ZCCHC13Q8WW36 166 aaKnown RBP8.29□□□□□ -1.08
NFKB1-201ENST00000226574 KRTAP29-1A8MX34 341 aaPredicted RBP8.29□□□□□ -1.08
NFKB1-201ENST00000226574 RBM12B-AS1Q9P1G2 102 aa8.28□□□□□ -1.08
NFKB1-201ENST00000226574 SPRR1BP22528 89 aa8.28□□□□□ -1.08
NFKB1-201ENST00000226574 Q75L30 129 aa8.27□□□□□ -1.09
NFKB1-201ENST00000226574 WWC2-AS2Q96NR7 200 aa8.26□□□□□ -1.09
NFKB1-201ENST00000226574 SRRM2Q9UQ35 2752 aaKnown RBP8.25□□□□□ -1.09
NFKB1-201ENST00000226574 LINC00304Q8N9R0 145 aa8.24□□□□□ -1.09
NFKB1-201ENST00000226574 LINC01558Q9Y6Z2 57 aa8.23□□□□□ -1.09
NFKB1-201ENST00000226574 LCA10Q71F78 164 aa8.22□□□□□ -1.09
NFKB1-201ENST00000226574 Q5W150 140 aa8.19□□□□□ -1.1
NFKB1-201ENST00000226574 TRRAPQ9Y4A5 3859 aa8.17□□□□□ -1.1
NFKB1-201ENST00000226574 A0A0D9SG42 100 aa8.17□□□□□ -1.1
NFKB1-201ENST00000226574 PLAC8Q9NZF1 115 aa8.16□□□□□ -1.1
NFKB1-201ENST00000226574 CRIPTQ9P021 101 aa8.12□□□□□ -1.11
NFKB1-201ENST00000226574 KRTAP10-2P60368 255 aa8.12□□□□□ -1.11
NFKB1-201ENST00000226574 LCE6AA0A183 80 aa8.1□□□□□ -1.11
NFKB1-201ENST00000226574 SPINT4Q6UDR6 99 aa8.09□□□□□ -1.11
NFKB1-201ENST00000226574 Q6ZR54 194 aa8.06□□□□□ -1.12
NFKB1-201ENST00000226574 FBN3Q75N90 2809 aa8.04□□□□□ -1.12
NFKB1-201ENST00000226574 CSAG1Q6PB30 78 aa8.03□□□□□ -1.12
NFKB1-201ENST00000226574 KRTAP10-1P60331 282 aa8.03□□□□□ -1.12
NFKB1-201ENST00000226574 A0A1B0GU33 70 aa8.01□□□□□ -1.13
NFKB1-201ENST00000226574 LINC00483Q53H64 154 aa8□□□□□ -1.13
NFKB1-201ENST00000226574 LINC01554Q52M75 96 aa8□□□□□ -1.13
NFKB1-201ENST00000226574 ADM2Q7Z4H4 148 aa8□□□□□ -1.13
NFKB1-201ENST00000226574 Q6ZRN7 208 aaPredicted RBP7.99□□□□□ -1.13
NFKB1-201ENST00000226574 COL7A1Q02388 2944 aa7.98□□□□□ -1.13
NFKB1-201ENST00000226574 DMAC1Q96GE9 116 aa7.97□□□□□ -1.13
NFKB1-201ENST00000226574 ZNF469Q96JG9 3925 aaPredicted RBP7.95□□□□□ -1.14
NFKB1-201ENST00000226574 KRTAP13-1Q8IUC0 172 aa7.94□□□□□ -1.14
NFKB1-201ENST00000226574 A6NN06 94 aa7.89□□□□□ -1.15
NFKB1-201ENST00000226574 CSMD3Q7Z407 3707 aa7.88□□□□□ -1.15
NFKB1-201ENST00000226574 SPATA8Q6RVD6 105 aa7.87□□□□□ -1.15
NFKB1-201ENST00000226574 KRTAP13-2Q52LG2 175 aa7.85□□□□□ -1.15
NFKB1-201ENST00000226574 H3BS24 57 aa7.82□□□□□ -1.16
NFKB1-201ENST00000226574 MEGF8Q7Z7M0 2845 aa7.79□□□□□ -1.16
NFKB1-201ENST00000226574 H1FX-AS1Q4G0G2 97 aa7.68□□□□□ -1.18
NFKB1-201ENST00000226574 COX6B2Q6YFQ2 88 aa7.68□□□□□ -1.18
NFKB1-201ENST00000226574 Q6ZSA8 131 aa7.65□□□□□ -1.18
NFKB1-201ENST00000226574 ANK3Q12955 4377 aaKnown RBP7.64□□□□□ -1.19
NFKB1-201ENST00000226574 ASB16-AS1Q495Z4 193 aa7.63□□□□□ -1.19
NFKB1-201ENST00000226574 J3QL48 77 aa7.62□□□□□ -1.19
NFKB1-201ENST00000226574 RPL37P61927 97 aaKnown RBP7.62□□□□□ -1.19
NFKB1-201ENST00000226574 S4R3F8 94 aa7.62□□□□□ -1.19
NFKB1-201ENST00000226574 ROMO1P60602 79 aa7.54□□□□□ -1.2
NFKB1-201ENST00000226574 Q5VSD8 79 aa7.53□□□□□ -1.2
NFKB1-201ENST00000226574 KRTAP1-4P0C5Y4 121 aa7.52□□□□□ -1.21
NFKB1-201ENST00000226574 CAMK2N1Q7Z7J9 78 aa7.49□□□□□ -1.21
NFKB1-201ENST00000226574 R4GN34 69 aa7.49□□□□□ -1.21
NFKB1-201ENST00000226574 AKAP9Q99996 3911 aa7.48□□□□□ -1.21
NFKB1-201ENST00000226574 KRTAP25-1Q3LHN0 102 aa7.48□□□□□ -1.21
NFKB1-201ENST00000226574 KRTAP16-1A8MUX0 517 aa7.42□□□□□ -1.22
NFKB1-201ENST00000226574 M0QZ58 72 aa7.42□□□□□ -1.22
NFKB1-201ENST00000226574 H0YAA0 97 aa7.41□□□□□ -1.22
NFKB1-201ENST00000226574 KRTAP13-3Q3SY46 172 aa7.4□□□□□ -1.22
NFKB1-201ENST00000226574 A8MUU9 505 aa7.36□□□□□ -1.23
NFKB1-201ENST00000226574 C10orf95Q9H7T3 257 aa7.36□□□□□ -1.23
NFKB1-201ENST00000226574 LUZP6Q538Z0 58 aa7.35□□□□□ -1.23
NFKB1-201ENST00000226574 C20orf166-AS1Q96NR2 134 aa7.32□□□□□ -1.24
NFKB1-201ENST00000226574 RPS29P62273 56 aaKnown RBP7.3□□□□□ -1.24
NFKB1-201ENST00000226574 NDUFAF8A1L188 74 aa7.3□□□□□ -1.24
NFKB1-201ENST00000226574 M0R2T5 61 aa7.22□□□□□ -1.25
NFKB1-201ENST00000226574 P0C880 135 aa7.19□□□□□ -1.26
NFKB1-201ENST00000226574 SEC61BP60468 96 aaKnown RBP7.17□□□□□ -1.26
NFKB1-201ENST00000226574 XP32Q5T750 250 aa7.14□□□□□ -1.27
NFKB1-201ENST00000226574 KRTAP3-1Q9BYR8 98 aa7.09□□□□□ -1.27
NFKB1-201ENST00000226574 HUWE1Q7Z6Z7 4374 aaKnown RBP7.06□□□□□ -1.28
NFKB1-201ENST00000226574 DNAH10Q8IVF4 4471 aa7.04□□□□□ -1.28
NFKB1-201ENST00000226574 KRTAP21-3Q3LHN1 58 aa6.99□□□□□ -1.29
NFKB1-201ENST00000226574 A0A0A0MQY5 61 aa6.96□□□□□ -1.29
NFKB1-201ENST00000226574 KRTAP10-8P60410 259 aa6.95□□□□□ -1.3
NFKB1-201ENST00000226574 KRTAP12-2P59991 146 aa6.91□□□□□ -1.3
NFKB1-201ENST00000226574 KRTAP13-4Q3LI77 160 aa6.9□□□□□ -1.3
NFKB1-201ENST00000226574 A0A1B0GVY2 172 aa6.9□□□□□ -1.31
NFKB1-201ENST00000226574 TPRXLQ17RH7 258 aa6.88□□□□□ -1.31
NFKB1-201ENST00000226574 DNHD1Q96M86 4753 aa6.87□□□□□ -1.31
NFKB1-201ENST00000226574 PLECQ15149 4684 aaKnown RBP6.86□□□□□ -1.31
NFKB1-201ENST00000226574 ANK2Q01484 3957 aa6.86□□□□□ -1.31
NFKB1-201ENST00000226574 DNAH11Q96DT5 4516 aa6.84□□□□□ -1.31
NFKB1-201ENST00000226574 PLAC4Q8WY50 150 aa6.84□□□□□ -1.31
NFKB1-201ENST00000226574 KRTAP10-6P60371 365 aaPredicted RBP6.81□□□□□ -1.32
NFKB1-201ENST00000226574 DNAH9Q9NYC9 4486 aa6.77□□□□□ -1.33
NFKB1-201ENST00000226574 LYSTQ99698 3801 aa6.77□□□□□ -1.33
NFKB1-201ENST00000226574 KRTAP12-1P59990 96 aa6.76□□□□□ -1.33
NFKB1-201ENST00000226574 TNP1P09430 55 aa6.73□□□□□ -1.33
NFKB1-201ENST00000226574 DNAH1Q9P2D7 4330 aa6.72□□□□□ -1.33
NFKB1-201ENST00000226574 DNAH8Q96JB1 4490 aa6.7□□□□□ -1.34
NFKB1-201ENST00000226574 FAT1Q14517 4588 aa6.67□□□□□ -1.34
NFKB1-201ENST00000226574 STARD9Q9P2P6 4700 aa6.66□□□□□ -1.34
NFKB1-201ENST00000226574 KRTAP3-3Q9BYR6 98 aa6.66□□□□□ -1.34
NFKB1-201ENST00000226574 DNAH5Q8TE73 4624 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms