RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 KRTAP13-1Q8IUC0 172 aa8.5□□□□□ -1.05
SHPK-201ENST00000225519 CSMD3Q7Z407 3707 aa8.49□□□□□ -1.05
SHPK-201ENST00000225519 ADM2Q7Z4H4 148 aa8.47□□□□□ -1.05
SHPK-201ENST00000225519 CIRBP-AS1Q8TBR5 109 aa8.47□□□□□ -1.05
SHPK-201ENST00000225519 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.46□□□□□ -1.05
SHPK-201ENST00000225519 WWC2-AS2Q96NR7 200 aa8.46□□□□□ -1.06
SHPK-201ENST00000225519 ANK2Q01484 3957 aa8.44□□□□□ -1.06
SHPK-201ENST00000225519 DNAH10Q8IVF4 4471 aa8.43□□□□□ -1.06
SHPK-201ENST00000225519 LINC00483Q53H64 154 aa8.43□□□□□ -1.06
SHPK-201ENST00000225519 FBN3Q75N90 2809 aa8.42□□□□□ -1.06
SHPK-201ENST00000225519 PSORS1C2Q9UIG4 136 aa8.42□□□□□ -1.06
SHPK-201ENST00000225519 LINC01554Q52M75 96 aa8.4□□□□□ -1.06
SHPK-201ENST00000225519 MIR22HGQ0VDD5 57 aa8.4□□□□□ -1.06
SHPK-201ENST00000225519 NBDYA0A0U1RRE5 68 aa8.4□□□□□ -1.07
SHPK-201ENST00000225519 KRTAP21-3Q3LHN1 58 aa8.4□□□□□ -1.07
SHPK-201ENST00000225519 APLNQ9ULZ1 77 aa8.4□□□□□ -1.07
SHPK-201ENST00000225519 SPACA4Q8TDM5 124 aa8.39□□□□□ -1.07
SHPK-201ENST00000225519 UQCR11O14957 56 aa8.38□□□□□ -1.07
SHPK-201ENST00000225519 ZNF861PO60384 105 aa8.37□□□□□ -1.07
SHPK-201ENST00000225519 DMAC1Q96GE9 116 aa8.37□□□□□ -1.07
SHPK-201ENST00000225519 PLA2G1BP04054 148 aaKnown RBP8.36□□□□□ -1.07
SHPK-201ENST00000225519 DNAH1Q9P2D7 4330 aa8.35□□□□□ -1.07
SHPK-201ENST00000225519 IGLV5-52A0A0A0MRZ9 124 aa8.35□□□□□ -1.07
SHPK-201ENST00000225519 FAM229AH3BQW9 127 aa8.35□□□□□ -1.07
SHPK-201ENST00000225519 SPATA8Q6RVD6 105 aa8.33□□□□□ -1.08
SHPK-201ENST00000225519 IGKV2D-30A0A075B6S6 120 aa8.32□□□□□ -1.08
SHPK-201ENST00000225519 IGKV2-30P06310 120 aa8.32□□□□□ -1.08
SHPK-201ENST00000225519 KRTAP13-3Q3SY46 172 aa8.32□□□□□ -1.08
SHPK-201ENST00000225519 NUPR2A6NF83 97 aa8.3□□□□□ -1.08
SHPK-201ENST00000225519 RTL8CO15255 209 aa8.29□□□□□ -1.08
SHPK-201ENST00000225519 SPINK1P00995 79 aa8.28□□□□□ -1.08
SHPK-201ENST00000225519 A0A087WTM6 91 aa8.27□□□□□ -1.09
SHPK-201ENST00000225519 DNHD1Q96M86 4753 aa8.26□□□□□ -1.09
SHPK-201ENST00000225519 CSAG1Q6PB30 78 aa8.26□□□□□ -1.09
SHPK-201ENST00000225519 Q6ZRN7 208 aaPredicted RBP8.26□□□□□ -1.09
SHPK-201ENST00000225519 HUWE1Q7Z6Z7 4374 aaKnown RBP8.25□□□□□ -1.09
SHPK-201ENST00000225519 LYSTQ99698 3801 aa8.23□□□□□ -1.09
SHPK-201ENST00000225519 IGLV7-43P04211 117 aa8.22□□□□□ -1.09
SHPK-201ENST00000225519 DNAH9Q9NYC9 4486 aa8.22□□□□□ -1.09
SHPK-201ENST00000225519 SSBP3-AS1Q7Z2R9 100 aa8.21□□□□□ -1.09
SHPK-201ENST00000225519 MEGF8Q7Z7M0 2845 aa8.2□□□□□ -1.1
SHPK-201ENST00000225519 DMBT1Q9UGM3 2413 aaPredicted RBP8.18□□□□□ -1.1
SHPK-201ENST00000225519 CMYA5Q8N3K9 4069 aa8.13□□□□□ -1.11
SHPK-201ENST00000225519 Q8N1X5 172 aa8.12□□□□□ -1.11
SHPK-201ENST00000225519 C1orf134Q5TEV5 83 aa8.11□□□□□ -1.11
SHPK-201ENST00000225519 ALMS1Q8TCU4 4167 aa8.11□□□□□ -1.11
SHPK-201ENST00000225519 DNAH3Q8TD57 4116 aa8.09□□□□□ -1.11
SHPK-201ENST00000225519 FLG2Q5D862 2391 aaPredicted RBP8.06□□□□□ -1.12
SHPK-201ENST00000225519 DNAH8Q96JB1 4490 aa8.03□□□□□ -1.12
SHPK-201ENST00000225519 KRTAP16-1A8MUX0 517 aa8.02□□□□□ -1.13
SHPK-201ENST00000225519 KRTAP13-2Q52LG2 175 aa8.01□□□□□ -1.13
SHPK-201ENST00000225519 FRAS1Q86XX4 4008 aa8□□□□□ -1.13
SHPK-201ENST00000225519 PLECQ15149 4684 aaKnown RBP8□□□□□ -1.13
SHPK-201ENST00000225519 DNAH7Q8WXX0 4024 aa8□□□□□ -1.13
SHPK-201ENST00000225519 A0A1B0GU33 70 aa7.93□□□□□ -1.14
SHPK-201ENST00000225519 Q6ZSA8 131 aa7.93□□□□□ -1.14
SHPK-201ENST00000225519 KRTAP25-1Q3LHN0 102 aa7.91□□□□□ -1.14
SHPK-201ENST00000225519 H0YAA0 97 aa7.91□□□□□ -1.14
SHPK-201ENST00000225519 TYMSOSQ8TAI1 123 aa7.91□□□□□ -1.14
SHPK-201ENST00000225519 K7ERS5 55 aa7.9□□□□□ -1.14
SHPK-201ENST00000225519 CRIPTQ9P021 101 aa7.9□□□□□ -1.15
SHPK-201ENST00000225519 A8MUU9 505 aa7.89□□□□□ -1.15
SHPK-201ENST00000225519 SMR3BP02814 79 aaPredicted RBP7.89□□□□□ -1.15
SHPK-201ENST00000225519 LINC00304Q8N9R0 145 aa7.89□□□□□ -1.15
SHPK-201ENST00000225519 KRTAP10-2P60368 255 aa7.87□□□□□ -1.15
SHPK-201ENST00000225519 HECTD4Q9Y4D8 3996 aa7.84□□□□□ -1.15
SHPK-201ENST00000225519 DNAH17Q9UFH2 4485 aa7.84□□□□□ -1.15
SHPK-201ENST00000225519 ROMO1P60602 79 aa7.83□□□□□ -1.16
SHPK-201ENST00000225519 H1FX-AS1Q4G0G2 97 aa7.83□□□□□ -1.16
SHPK-201ENST00000225519 C9orf92A6NGG3 77 aa7.81□□□□□ -1.16
SHPK-201ENST00000225519 KRTAP1-4P0C5Y4 121 aa7.79□□□□□ -1.16
SHPK-201ENST00000225519 DYNC2H1Q8NCM8 4307 aaKnown RBP7.78□□□□□ -1.16
SHPK-201ENST00000225519 VPS13DQ5THJ4 4388 aa7.78□□□□□ -1.16
SHPK-201ENST00000225519 SPINT4Q6UDR6 99 aa7.77□□□□□ -1.17
SHPK-201ENST00000225519 STARD9Q9P2P6 4700 aa7.77□□□□□ -1.17
SHPK-201ENST00000225519 KRTAP10-1P60331 282 aa7.77□□□□□ -1.17
SHPK-201ENST00000225519 KMT2AQ03164 3969 aa7.73□□□□□ -1.17
SHPK-201ENST00000225519 PRKDCP78527 4128 aaKnown RBP7.7□□□□□ -1.18
SHPK-201ENST00000225519 DNAH2Q9P225 4427 aa7.7□□□□□ -1.18
SHPK-201ENST00000225519 DNAH11Q96DT5 4516 aa7.68□□□□□ -1.18
SHPK-201ENST00000225519 COX6B2Q6YFQ2 88 aa7.66□□□□□ -1.18
SHPK-201ENST00000225519 KRTAP3-1Q9BYR8 98 aa7.65□□□□□ -1.18
SHPK-201ENST00000225519 A0A0D9SG42 100 aa7.64□□□□□ -1.19
SHPK-201ENST00000225519 DNAH6Q9C0G6 4158 aa7.62□□□□□ -1.19
SHPK-201ENST00000225519 LRP1BQ9NZR2 4599 aa7.6□□□□□ -1.19
SHPK-201ENST00000225519 C20orf166-AS1Q96NR2 134 aa7.58□□□□□ -1.2
SHPK-201ENST00000225519 J3QL48 77 aa7.58□□□□□ -1.2
SHPK-201ENST00000225519 RPL37P61927 97 aaKnown RBP7.57□□□□□ -1.2
SHPK-201ENST00000225519 P0C880 135 aa7.55□□□□□ -1.2
SHPK-201ENST00000225519 DNAH5Q8TE73 4624 aa7.55□□□□□ -1.2
SHPK-201ENST00000225519 RPS29P62273 56 aaKnown RBP7.54□□□□□ -1.2
SHPK-201ENST00000225519 NDUFAF8A1L188 74 aa7.46□□□□□ -1.21
SHPK-201ENST00000225519 VPS13BQ7Z7G8 4022 aa7.46□□□□□ -1.21
SHPK-201ENST00000225519 C10orf95Q9H7T3 257 aa7.46□□□□□ -1.22
SHPK-201ENST00000225519 TPRXLQ17RH7 258 aa7.43□□□□□ -1.22
SHPK-201ENST00000225519 Q5VSD8 79 aa7.43□□□□□ -1.22
SHPK-201ENST00000225519 KRTAP13-4Q3LI77 160 aa7.39□□□□□ -1.23
SHPK-201ENST00000225519 A0A0A0MQY5 61 aa7.39□□□□□ -1.23
SHPK-201ENST00000225519 KRTAP10-6P60371 365 aaPredicted RBP7.37□□□□□ -1.23
SHPK-201ENST00000225519 S4R3F8 94 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms