RNA–Protein interactions for RNA: ENST00000222718.6

HOXA2-201, Transcript of homeobox A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA2, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2-201ENST00000222718 LINC00208Q96KT6 92 aa10.2□□□□□ -0.78
HOXA2-201ENST00000222718 LRP1BQ9NZR2 4599 aa10.2□□□□□ -0.78
HOXA2-201ENST00000222718 KRTAP13-2Q52LG2 175 aa10.19□□□□□ -0.78
HOXA2-201ENST00000222718 KRTAP17-1Q9BYP8 105 aa10.19□□□□□ -0.78
HOXA2-201ENST00000222718 Q5XG85 94 aa10.18□□□□□ -0.78
HOXA2-201ENST00000222718 TRAV22A0A0B4J277 110 aa10.17□□□□□ -0.78
HOXA2-201ENST00000222718 MRPL34Q9BQ48 92 aaKnown RBP10.17□□□□□ -0.78
HOXA2-201ENST00000222718 KRTAP1-4P0C5Y4 121 aa10.16□□□□□ -0.78
HOXA2-201ENST00000222718 SPINK6Q6UWN8 80 aa10.16□□□□□ -0.78
HOXA2-201ENST00000222718 C1orf64Q8NEQ6 169 aa10.14□□□□□ -0.79
HOXA2-201ENST00000222718 SMIM26A0A096LP01 95 aa10.12□□□□□ -0.79
HOXA2-201ENST00000222718 C8orf87E5RJ46 101 aa10.12□□□□□ -0.79
HOXA2-201ENST00000222718 NDUFS5O43920 106 aa10.11□□□□□ -0.79
HOXA2-201ENST00000222718 NOTCH2NLQ7Z3S9 236 aa10.1□□□□□ -0.79
HOXA2-201ENST00000222718 CYP4F30PQ9H0H9 118 aa10.1□□□□□ -0.79
HOXA2-201ENST00000222718 PLA2G1BP04054 148 aaKnown RBP10.1□□□□□ -0.79
HOXA2-201ENST00000222718 LIMD2Q9BT23 127 aa10.09□□□□□ -0.79
HOXA2-201ENST00000222718 A0A1B0GVY2 172 aa10.08□□□□□ -0.8
HOXA2-201ENST00000222718 SPANXA2-OT1Q8N9U9 137 aa10.08□□□□□ -0.8
HOXA2-201ENST00000222718 C4orf48Q5BLP8 95 aa10.06□□□□□ -0.8
HOXA2-201ENST00000222718 C1orf195Q5TG92 126 aa10.06□□□□□ -0.8
HOXA2-201ENST00000222718 VPS13BQ7Z7G8 4022 aa10.05□□□□□ -0.8
HOXA2-201ENST00000222718 TYMSOSQ8TAI1 123 aa10.05□□□□□ -0.8
HOXA2-201ENST00000222718 HERC2O95714 4834 aa10.05□□□□□ -0.8
HOXA2-201ENST00000222718 LINC00313P59037 77 aa10.03□□□□□ -0.8
HOXA2-201ENST00000222718 SPINK1P00995 79 aa10.01□□□□□ -0.81
HOXA2-201ENST00000222718 FP248Q71RG6 208 aaPredicted RBP10□□□□□ -0.81
HOXA2-201ENST00000222718 PRR4Q16378 134 aa9.98□□□□□ -0.81
HOXA2-201ENST00000222718 DYNC1H1Q14204 4646 aaKnown RBP9.98□□□□□ -0.81
HOXA2-201ENST00000222718 C4orf26Q17RF5 130 aa9.98□□□□□ -0.81
HOXA2-201ENST00000222718 IGLV7-46A0A075B6I9 117 aa9.96□□□□□ -0.82
HOXA2-201ENST00000222718 SMR3BP02814 79 aaPredicted RBP9.96□□□□□ -0.82
HOXA2-201ENST00000222718 SPAG11AQ6PDA7 123 aa9.96□□□□□ -0.82
HOXA2-201ENST00000222718 RPS29P62273 56 aaKnown RBP9.95□□□□□ -0.82
HOXA2-201ENST00000222718 LOC101927531A0A1B0GV80 90 aa9.94□□□□□ -0.82
HOXA2-201ENST00000222718 PKHD1P08F94 4074 aa9.94□□□□□ -0.82
HOXA2-201ENST00000222718 Q8N9P0 234 aaPredicted RBP9.93□□□□□ -0.82
HOXA2-201ENST00000222718 KIAA1109Q2LD37 5005 aa9.93□□□□□ -0.82
HOXA2-201ENST00000222718 PRR26Q8N8Z3 221 aa9.92□□□□□ -0.82
HOXA2-201ENST00000222718 LINC00304Q8N9R0 145 aa9.92□□□□□ -0.82
HOXA2-201ENST00000222718 PCLOQ9Y6V0 5065 aa9.92□□□□□ -0.82
HOXA2-201ENST00000222718 KRTAP13-3Q3SY46 172 aa9.91□□□□□ -0.82
HOXA2-201ENST00000222718 PCOTHQ58A44 107 aa9.91□□□□□ -0.82
HOXA2-201ENST00000222718 Q5W150 140 aa9.91□□□□□ -0.82
HOXA2-201ENST00000222718 FAM229AH3BQW9 127 aa9.89□□□□□ -0.83
HOXA2-201ENST00000222718 KRTAP10-4P60372 401 aaPredicted RBP9.89□□□□□ -0.83
HOXA2-201ENST00000222718 KRTAP16-1A8MUX0 517 aa9.86□□□□□ -0.83
HOXA2-201ENST00000222718 APOBP04114 4563 aaKnown RBP9.85□□□□□ -0.83
HOXA2-201ENST00000222718 MPLKIPQ8TAP9 179 aa9.85□□□□□ -0.83
HOXA2-201ENST00000222718 Q1T7F1 81 aa9.82□□□□□ -0.84
HOXA2-201ENST00000222718 RYR1P21817 5038 aa9.78□□□□□ -0.84
HOXA2-201ENST00000222718 COA5Q86WW8 74 aa9.77□□□□□ -0.84
HOXA2-201ENST00000222718 V9GYY9 64 aa9.77□□□□□ -0.84
HOXA2-201ENST00000222718 SVIPQ8NHG7 77 aa9.77□□□□□ -0.85
HOXA2-201ENST00000222718 IGKV2-30P06310 120 aa9.75□□□□□ -0.85
HOXA2-201ENST00000222718 FAT1Q14517 4588 aa9.74□□□□□ -0.85
HOXA2-201ENST00000222718 KRTAP4-5Q9BYR2 181 aa9.74□□□□□ -0.85
HOXA2-201ENST00000222718 RETNLBQ9BQ08 111 aa9.72□□□□□ -0.85
HOXA2-201ENST00000222718 PKHD1L1Q86WI1 4243 aa9.71□□□□□ -0.86
HOXA2-201ENST00000222718 ABCA13Q86UQ4 5058 aa9.69□□□□□ -0.86
HOXA2-201ENST00000222718 HRES1P13985 223 aa9.68□□□□□ -0.86
HOXA2-201ENST00000222718 ACYP2P14621 99 aa9.66□□□□□ -0.86
HOXA2-201ENST00000222718 HSPG2P98160 4391 aa9.65□□□□□ -0.86
HOXA2-201ENST00000222718 DMAC1Q96GE9 116 aa9.62□□□□□ -0.87
HOXA2-201ENST00000222718 IGKV2D-30A0A075B6S6 120 aa9.61□□□□□ -0.87
HOXA2-201ENST00000222718 PSPHP1O15172 72 aa9.6□□□□□ -0.87
HOXA2-201ENST00000222718 Q5VSD8 79 aa9.59□□□□□ -0.88
HOXA2-201ENST00000222718 C20orf166-AS1Q96NR2 134 aa9.58□□□□□ -0.88
HOXA2-201ENST00000222718 A8MUN3 132 aa9.56□□□□□ -0.88
HOXA2-201ENST00000222718 A8MUU9 505 aa9.56□□□□□ -0.88
HOXA2-201ENST00000222718 PRO0628Q9UI54 55 aa9.56□□□□□ -0.88
HOXA2-201ENST00000222718 KRTAP10-8P60410 259 aa9.56□□□□□ -0.88
HOXA2-201ENST00000222718 C9orf92A6NGG3 77 aa9.54□□□□□ -0.88
HOXA2-201ENST00000222718 C7orf65Q6ZTY9 151 aa9.54□□□□□ -0.88
HOXA2-201ENST00000222718 Q8N1X5 172 aa9.54□□□□□ -0.88
HOXA2-201ENST00000222718 BRK1Q8WUW1 75 aa9.54□□□□□ -0.88
HOXA2-201ENST00000222718 LINC01558Q9Y6Z2 57 aa9.54□□□□□ -0.88
HOXA2-201ENST00000222718 PRR15LQ9BU68 103 aa9.52□□□□□ -0.89
HOXA2-201ENST00000222718 Q5VV11 94 aa9.52□□□□□ -0.89
HOXA2-201ENST00000222718 CHKB-CPT1BH3BT56 60 aa9.51□□□□□ -0.89
HOXA2-201ENST00000222718 Q75L30 129 aa9.46□□□□□ -0.9
HOXA2-201ENST00000222718 TNXBP22105 4242 aa9.42□□□□□ -0.9
HOXA2-201ENST00000222718 FLG2Q5D862 2391 aaPredicted RBP9.41□□□□□ -0.9
HOXA2-201ENST00000222718 FAT3Q8TDW7 4589 aa9.37□□□□□ -0.91
HOXA2-201ENST00000222718 HERC1Q15751 4861 aa9.35□□□□□ -0.91
HOXA2-201ENST00000222718 LRP1Q07954 4544 aaKnown RBP9.33□□□□□ -0.92
HOXA2-201ENST00000222718 SPINK7P58062 85 aa9.33□□□□□ -0.92
HOXA2-201ENST00000222718 A6NED7 52 aa9.32□□□□□ -0.92
HOXA2-201ENST00000222718 ATP11AUNQ6ZP68 121 aa9.28□□□□□ -0.92
HOXA2-201ENST00000222718 MT1HL1P0DM35 61 aa9.27□□□□□ -0.93
HOXA2-201ENST00000222718 DMBT1Q9UGM3 2413 aaPredicted RBP9.26□□□□□ -0.93
HOXA2-201ENST00000222718 A0A1B0GU69 56 aa9.25□□□□□ -0.93
HOXA2-201ENST00000222718 RPL37P61927 97 aaKnown RBP9.24□□□□□ -0.93
HOXA2-201ENST00000222718 SPTSSBQ8NFR3 76 aa9.24□□□□□ -0.93
HOXA2-201ENST00000222718 CDC42SE1Q9NRR8 79 aa9.22□□□□□ -0.93
HOXA2-201ENST00000222718 LCA10Q71F78 164 aa9.21□□□□□ -0.93
HOXA2-201ENST00000222718 MYCBP2O75592 4640 aa9.21□□□□□ -0.93
HOXA2-201ENST00000222718 XP32Q5T750 250 aa9.19□□□□□ -0.94
HOXA2-201ENST00000222718 KRTAP3-1Q9BYR8 98 aa9.19□□□□□ -0.94
HOXA2-201ENST00000222718 COX6B2Q6YFQ2 88 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms