RNA–Protein interactions for RNA: ENST00000222718.6

HOXA2-201, Transcript of homeobox A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA2, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2-201ENST00000222718 NISCHQ9Y2I1 1504 aa37.82■■■■□ 3.64
HOXA2-201ENST00000222718 CCDC180Q9P1Z9 1646 aa32.58■■■□□ 2.81
HOXA2-201ENST00000222718 ZCCHC6Q5VYS8 1495 aaKnown RBP31.88■■■□□ 2.69
HOXA2-201ENST00000222718 SHROOM4Q9ULL8 1493 aa31.35■■■□□ 2.61
HOXA2-201ENST00000222718 DCAF1Q9Y4B6 1507 aa31.27■■■□□ 2.6
HOXA2-201ENST00000222718 ABCC9O60706 1549 aa31.17■■■□□ 2.58
HOXA2-201ENST00000222718 DCAF8L2P0C7V8 631 aa31.16■■■□□ 2.58
HOXA2-201ENST00000222718 MYO15BQ96JP2 1530 aa30.67■■■□□ 2.5
HOXA2-201ENST00000222718 SUPT5HO00267 1087 aaKnown RBP30.55■■■□□ 2.48
HOXA2-201ENST00000222718 NACADO15069 1562 aa30.28■■■□□ 2.44
HOXA2-201ENST00000222718 SCRIBQ14160 1630 aa30.1■■■□□ 2.41
HOXA2-201ENST00000222718 RB1CC1Q8TDY2 1594 aa29.85■■■□□ 2.37
HOXA2-201ENST00000222718 RSF1Q96T23 1441 aaPredicted RBP29.63■■■□□ 2.33
HOXA2-201ENST00000222718 CHIC1Q5VXU3 224 aa29.58■■■□□ 2.33
HOXA2-201ENST00000222718 DNAJC5BQ9UF47 199 aa29.37■■■□□ 2.29
HOXA2-201ENST00000222718 CECR2Q9BXF3 1484 aa29.34■■■□□ 2.29
HOXA2-201ENST00000222718 MROH2BQ7Z745 1585 aa29.24■■■□□ 2.27
HOXA2-201ENST00000222718 BAZ1AQ9NRL2 1556 aaPredicted RBP29.15■■■□□ 2.26
HOXA2-201ENST00000222718 UNC13AQ9UPW8 1703 aa29.14■■■□□ 2.26
HOXA2-201ENST00000222718 PABPN1Q86U42 306 aaKnown RBP eCLIP29.06■■■□□ 2.24
HOXA2-201ENST00000222718 WIZO95785 1651 aa28.99■■■□□ 2.23
HOXA2-201ENST00000222718 BICRAQ9NZM4 1560 aa28.91■■■□□ 2.22
HOXA2-201ENST00000222718 SMARCA4P51532 1647 aa28.89■■■□□ 2.22
HOXA2-201ENST00000222718 TOP2AP11388 1531 aaKnown RBP28.74■■■□□ 2.19
HOXA2-201ENST00000222718 TRIM41Q8WV44 630 aa28.7■■■□□ 2.18
HOXA2-201ENST00000222718 PEG3Q9GZU2 1588 aa28.53■■■□□ 2.16
HOXA2-201ENST00000222718 CCDC88BA6NC98 1476 aa28.5■■■□□ 2.15
HOXA2-201ENST00000222718 LOC105371045A0A1W2PR82 267 aa28.48■■■□□ 2.15
HOXA2-201ENST00000222718 SMARCA2P51531 1590 aa28.48■■■□□ 2.15
HOXA2-201ENST00000222718 EIF4G1Q04637 1599 aaKnown RBP28.45■■■□□ 2.15
HOXA2-201ENST00000222718 ATAD2BQ9ULI0 1458 aa28.32■■■□□ 2.12
HOXA2-201ENST00000222718 BAZ1BQ9UIG0 1483 aaKnown RBP28.19■■■□□ 2.1
HOXA2-201ENST00000222718 FAM9AQ8IZU1 332 aaPredicted RBP28.17■■■□□ 2.1
HOXA2-201ENST00000222718 CC2D2AQ9P2K1 1620 aa28.14■■■□□ 2.09
HOXA2-201ENST00000222718 ABCC8Q09428 1581 aa28.05■■■□□ 2.08
HOXA2-201ENST00000222718 NCAPD3P42695 1498 aa27.98■■■□□ 2.07
HOXA2-201ENST00000222718 HMGXB3Q12766 1538 aa27.94■■■□□ 2.06
HOXA2-201ENST00000222718 PCGF6Q9BYE7 350 aa27.88■■■□□ 2.05
HOXA2-201ENST00000222718 WRNQ14191 1432 aaPredicted RBP eCLIP27.87■■■□□ 2.05
HOXA2-201ENST00000222718 EEA1Q15075 1411 aa27.84■■■□□ 2.05
HOXA2-201ENST00000222718 TRIM26Q12899 539 aaPredicted RBP27.74■■■□□ 2.03
HOXA2-201ENST00000222718 EHMT2Q96KQ7 1210 aa27.74■■■□□ 2.03
HOXA2-201ENST00000222718 SOGA1O94964 1423 aa27.73■■■□□ 2.03
HOXA2-201ENST00000222718 CSRNP3Q8WYN3 585 aa27.67■■■□□ 2.02
HOXA2-201ENST00000222718 SYNJ1O43426 1573 aa27.65■■■□□ 2.02
HOXA2-201ENST00000222718 HRCP23327 699 aa27.6■■■□□ 2.01
HOXA2-201ENST00000222718 RUSC2Q8N2Y8 1516 aa27.56■■■□□ 2
HOXA2-201ENST00000222718 TNIKQ9UKE5 1360 aa27.53■■■□□ 2
HOXA2-201ENST00000222718 CFTRP13569 1480 aa27.53■■■□□ 2
HOXA2-201ENST00000222718 TOP2BQ02880 1626 aa27.51■■□□□ 1.99
HOXA2-201ENST00000222718 GOLGA3Q08378 1498 aa27.45■■□□□ 1.99
HOXA2-201ENST00000222718 BIVM-ERCC5R4GMW8 1640 aa27.43■■□□□ 1.98
HOXA2-201ENST00000222718 CEP164Q9UPV0 1460 aa27.39■■□□□ 1.98
HOXA2-201ENST00000222718 CEP162Q5TB80 1403 aa27.39■■□□□ 1.98
HOXA2-201ENST00000222718 UBTFP17480 764 aaKnown RBP27.38■■□□□ 1.97
HOXA2-201ENST00000222718 KIF21BO75037 1637 aa27.35■■□□□ 1.97
HOXA2-201ENST00000222718 CADPSQ9ULU8 1353 aa27.34■■□□□ 1.97
HOXA2-201ENST00000222718 CUX1P39880 1505 aa27.29■■□□□ 1.96
HOXA2-201ENST00000222718 PRDM2Q13029 1718 aa27.25■■□□□ 1.95
HOXA2-201ENST00000222718 KIF27Q86VH2 1401 aa27.13■■□□□ 1.93
HOXA2-201ENST00000222718 RAPGEF2Q9Y4G8 1499 aa27.12■■□□□ 1.93
HOXA2-201ENST00000222718 PRXQ9BXM0 1461 aa27.08■■□□□ 1.93
HOXA2-201ENST00000222718 ERICH3Q5RHP9 1530 aa27.08■■□□□ 1.93
HOXA2-201ENST00000222718 PPARGC1BQ86YN6 1023 aaKnown RBP27.06■■□□□ 1.92
HOXA2-201ENST00000222718 CLIP1P30622 1438 aa27.05■■□□□ 1.92
HOXA2-201ENST00000222718 ZEB1P37275 1124 aaPredicted RBP27.01■■□□□ 1.91
HOXA2-201ENST00000222718 FANCD2Q9BXW9 1451 aa27■■□□□ 1.91
HOXA2-201ENST00000222718 DNAJC5Q9H3Z4 198 aa26.97■■□□□ 1.91
HOXA2-201ENST00000222718 VPS8Q8N3P4 1428 aa26.9■■□□□ 1.9
HOXA2-201ENST00000222718 FGD5Q6ZNL6 1462 aa26.9■■□□□ 1.9
HOXA2-201ENST00000222718 CUX2O14529 1486 aa26.89■■□□□ 1.89
HOXA2-201ENST00000222718 ERCC6Q03468 1493 aa26.88■■□□□ 1.89
HOXA2-201ENST00000222718 LAMC3Q9Y6N6 1575 aa26.87■■□□□ 1.89
HOXA2-201ENST00000222718 IGF1RP08069 1367 aa26.84■■□□□ 1.89
HOXA2-201ENST00000222718 DNMBPQ6XZF7 1577 aa26.84■■□□□ 1.89
HOXA2-201ENST00000222718 NESP48681 1621 aa26.82■■□□□ 1.88
HOXA2-201ENST00000222718 TOPBP1Q92547 1522 aa26.76■■□□□ 1.87
HOXA2-201ENST00000222718 APLP2Q06481 763 aa26.76■■□□□ 1.87
HOXA2-201ENST00000222718 PDS5BQ9NTI5 1447 aa26.73■■□□□ 1.87
HOXA2-201ENST00000222718 CARMIL1Q5VZK9 1371 aa26.72■■□□□ 1.87
HOXA2-201ENST00000222718 RANGAP1P46060 587 aaPredicted RBP26.72■■□□□ 1.87
HOXA2-201ENST00000222718 TTBK1Q5TCY1 1321 aaPredicted RBP26.71■■□□□ 1.87
HOXA2-201ENST00000222718 ABCA10Q8WWZ4 1543 aa26.7■■□□□ 1.86
HOXA2-201ENST00000222718 POLA1P09884 1462 aaPredicted RBP26.69■■□□□ 1.86
HOXA2-201ENST00000222718 ARAP1Q96P48 1450 aa26.66■■□□□ 1.86
HOXA2-201ENST00000222718 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
HOXA2-201ENST00000222718 URB2Q14146 1524 aaKnown RBP26.6■■□□□ 1.85
HOXA2-201ENST00000222718 ARHGAP35Q9NRY4 1499 aa26.55■■□□□ 1.84
HOXA2-201ENST00000222718 CCER1Q8TC90 406 aaPredicted RBP26.53■■□□□ 1.84
HOXA2-201ENST00000222718 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.51■■□□□ 1.83
HOXA2-201ENST00000222718 THOC2Q8NI27 1593 aaKnown RBP26.46■■□□□ 1.83
HOXA2-201ENST00000222718 CUL7Q14999 1698 aa26.46■■□□□ 1.83
HOXA2-201ENST00000222718 WDR97A6NE52 1622 aa26.43■■□□□ 1.82
HOXA2-201ENST00000222718 KIF21AQ7Z4S6 1674 aa26.41■■□□□ 1.82
HOXA2-201ENST00000222718 ABCA5Q8WWZ7 1642 aa26.36■■□□□ 1.81
HOXA2-201ENST00000222718 GAPVD1Q14C86 1478 aa26.35■■□□□ 1.81
HOXA2-201ENST00000222718 TDRD9Q8NDG6 1382 aaKnown RBP26.35■■□□□ 1.81
HOXA2-201ENST00000222718 KANK4Q5T7N3 995 aaPredicted RBP26.33■■□□□ 1.81
HOXA2-201ENST00000222718 MAP3K1Q13233 1512 aa26.32■■□□□ 1.8
HOXA2-201ENST00000222718 FHAD1B1AJZ9 1412 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms