RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 TYMSOSQ8TAI1 123 aa8.88□□□□□ -0.99
UBE2D4-201ENST00000222402 Q96NJ1 140 aa8.87□□□□□ -0.99
UBE2D4-201ENST00000222402 ANK2Q01484 3957 aa8.86□□□□□ -0.99
UBE2D4-201ENST00000222402 COL7A1Q02388 2944 aa8.85□□□□□ -0.99
UBE2D4-201ENST00000222402 FAM229AH3BQW9 127 aa8.85□□□□□ -0.99
UBE2D4-201ENST00000222402 ACYP2P14621 99 aa8.85□□□□□ -0.99
UBE2D4-201ENST00000222402 Q8N9P0 234 aaPredicted RBP8.84□□□□□ -0.99
UBE2D4-201ENST00000222402 KRTAP10-1P60331 282 aa8.8□□□□□ -1
UBE2D4-201ENST00000222402 PRR26Q8N8Z3 221 aa8.79□□□□□ -1
UBE2D4-201ENST00000222402 SPINK1P00995 79 aa8.77□□□□□ -1.01
UBE2D4-201ENST00000222402 SMR3BP02814 79 aaPredicted RBP8.77□□□□□ -1.01
UBE2D4-201ENST00000222402 Q5VV11 94 aa8.76□□□□□ -1.01
UBE2D4-201ENST00000222402 DNAH10Q8IVF4 4471 aa8.75□□□□□ -1.01
UBE2D4-201ENST00000222402 HRES1P13985 223 aa8.74□□□□□ -1.01
UBE2D4-201ENST00000222402 Q5W150 140 aa8.74□□□□□ -1.01
UBE2D4-201ENST00000222402 C7orf65Q6ZTY9 151 aa8.74□□□□□ -1.01
UBE2D4-201ENST00000222402 FBN3Q75N90 2809 aa8.73□□□□□ -1.01
UBE2D4-201ENST00000222402 MEGF8Q7Z7M0 2845 aa8.73□□□□□ -1.01
UBE2D4-201ENST00000222402 A0A1B0GU69 56 aa8.7□□□□□ -1.02
UBE2D4-201ENST00000222402 SEC61GP60059 68 aa8.7□□□□□ -1.02
UBE2D4-201ENST00000222402 LINC00304Q8N9R0 145 aa8.69□□□□□ -1.02
UBE2D4-201ENST00000222402 DNAH9Q9NYC9 4486 aa8.67□□□□□ -1.02
UBE2D4-201ENST00000222402 KRTAP13-2Q52LG2 175 aa8.65□□□□□ -1.02
UBE2D4-201ENST00000222402 Q75L30 129 aa8.65□□□□□ -1.03
UBE2D4-201ENST00000222402 ASB16-AS1Q495Z4 193 aa8.64□□□□□ -1.03
UBE2D4-201ENST00000222402 LINC01558Q9Y6Z2 57 aa8.64□□□□□ -1.03
UBE2D4-201ENST00000222402 CMYA5Q8N3K9 4069 aa8.63□□□□□ -1.03
UBE2D4-201ENST00000222402 C9orf92A6NGG3 77 aa8.63□□□□□ -1.03
UBE2D4-201ENST00000222402 PLECQ15149 4684 aaKnown RBP8.61□□□□□ -1.03
UBE2D4-201ENST00000222402 ATP11AUNQ6ZP68 121 aa8.6□□□□□ -1.03
UBE2D4-201ENST00000222402 A8MU10 97 aa8.59□□□□□ -1.03
UBE2D4-201ENST00000222402 CDC42SE1Q9NRR8 79 aa8.59□□□□□ -1.03
UBE2D4-201ENST00000222402 DNAH3Q8TD57 4116 aa8.57□□□□□ -1.04
UBE2D4-201ENST00000222402 Q8N1X5 172 aa8.57□□□□□ -1.04
UBE2D4-201ENST00000222402 SPINK7P58062 85 aa8.56□□□□□ -1.04
UBE2D4-201ENST00000222402 LYSTQ99698 3801 aa8.54□□□□□ -1.04
UBE2D4-201ENST00000222402 DMAC1Q96GE9 116 aa8.52□□□□□ -1.05
UBE2D4-201ENST00000222402 Q6ZSA8 131 aa8.52□□□□□ -1.05
UBE2D4-201ENST00000222402 LCA10Q71F78 164 aa8.51□□□□□ -1.05
UBE2D4-201ENST00000222402 UQCR11O14957 56 aa8.48□□□□□ -1.05
UBE2D4-201ENST00000222402 DMBT1Q9UGM3 2413 aaPredicted RBP8.47□□□□□ -1.05
UBE2D4-201ENST00000222402 KRTAP1-4P0C5Y4 121 aa8.47□□□□□ -1.05
UBE2D4-201ENST00000222402 KTN1-AS1Q86SY8 53 aa8.45□□□□□ -1.06
UBE2D4-201ENST00000222402 DNAH1Q9P2D7 4330 aa8.44□□□□□ -1.06
UBE2D4-201ENST00000222402 MIR22HGQ0VDD5 57 aa8.44□□□□□ -1.06
UBE2D4-201ENST00000222402 STARD9Q9P2P6 4700 aa8.43□□□□□ -1.06
UBE2D4-201ENST00000222402 KRTAP13-3Q3SY46 172 aa8.37□□□□□ -1.07
UBE2D4-201ENST00000222402 PRKDCP78527 4128 aaKnown RBP8.37□□□□□ -1.07
UBE2D4-201ENST00000222402 VPS13DQ5THJ4 4388 aa8.36□□□□□ -1.07
UBE2D4-201ENST00000222402 DNAH7Q8WXX0 4024 aa8.35□□□□□ -1.07
UBE2D4-201ENST00000222402 FLG2Q5D862 2391 aaPredicted RBP8.34□□□□□ -1.07
UBE2D4-201ENST00000222402 KRTAP16-1A8MUX0 517 aa8.33□□□□□ -1.08
UBE2D4-201ENST00000222402 KMT2AQ03164 3969 aa8.29□□□□□ -1.08
UBE2D4-201ENST00000222402 K7ERS5 55 aa8.29□□□□□ -1.08
UBE2D4-201ENST00000222402 DNAH11Q96DT5 4516 aa8.27□□□□□ -1.09
UBE2D4-201ENST00000222402 RPS29P62273 56 aaKnown RBP8.25□□□□□ -1.09
UBE2D4-201ENST00000222402 DNAH17Q9UFH2 4485 aa8.24□□□□□ -1.09
UBE2D4-201ENST00000222402 A6NN06 94 aa8.24□□□□□ -1.09
UBE2D4-201ENST00000222402 DNHD1Q96M86 4753 aa8.22□□□□□ -1.09
UBE2D4-201ENST00000222402 DNAH8Q96JB1 4490 aa8.22□□□□□ -1.09
UBE2D4-201ENST00000222402 RBM12B-AS1Q9P1G2 102 aa8.22□□□□□ -1.09
UBE2D4-201ENST00000222402 PRAC1Q96KF2 57 aa8.2□□□□□ -1.1
UBE2D4-201ENST00000222402 DYNC2H1Q8NCM8 4307 aaKnown RBP8.19□□□□□ -1.1
UBE2D4-201ENST00000222402 KRTAP21-3Q3LHN1 58 aa8.17□□□□□ -1.1
UBE2D4-201ENST00000222402 SPATA8Q6RVD6 105 aa8.17□□□□□ -1.1
UBE2D4-201ENST00000222402 FRAS1Q86XX4 4008 aa8.16□□□□□ -1.1
UBE2D4-201ENST00000222402 A0A1B0GU33 70 aa8.16□□□□□ -1.1
UBE2D4-201ENST00000222402 Q5VSD8 79 aa8.14□□□□□ -1.11
UBE2D4-201ENST00000222402 DNAH2Q9P225 4427 aa8.14□□□□□ -1.11
UBE2D4-201ENST00000222402 A8MUU9 505 aa8.12□□□□□ -1.11
UBE2D4-201ENST00000222402 HECTD4Q9Y4D8 3996 aa8.12□□□□□ -1.11
UBE2D4-201ENST00000222402 C20orf166-AS1Q96NR2 134 aa8.12□□□□□ -1.11
UBE2D4-201ENST00000222402 LRP1BQ9NZR2 4599 aa8.08□□□□□ -1.12
UBE2D4-201ENST00000222402 COX6B2Q6YFQ2 88 aa8.07□□□□□ -1.12
UBE2D4-201ENST00000222402 ADM2Q7Z4H4 148 aa8.04□□□□□ -1.12
UBE2D4-201ENST00000222402 DNAH6Q9C0G6 4158 aa8.04□□□□□ -1.12
UBE2D4-201ENST00000222402 A0A1B0GVY2 172 aa8.02□□□□□ -1.13
UBE2D4-201ENST00000222402 A0A0D9SG42 100 aa8.02□□□□□ -1.13
UBE2D4-201ENST00000222402 DNAH5Q8TE73 4624 aa7.99□□□□□ -1.13
UBE2D4-201ENST00000222402 H1FX-AS1Q4G0G2 97 aa7.99□□□□□ -1.13
UBE2D4-201ENST00000222402 CSAG1Q6PB30 78 aa7.97□□□□□ -1.13
UBE2D4-201ENST00000222402 S4R3F8 94 aa7.93□□□□□ -1.14
UBE2D4-201ENST00000222402 ALMS1Q8TCU4 4167 aa7.91□□□□□ -1.14
UBE2D4-201ENST00000222402 LINC01554Q52M75 96 aa7.9□□□□□ -1.14
UBE2D4-201ENST00000222402 VPS13BQ7Z7G8 4022 aa7.9□□□□□ -1.15
UBE2D4-201ENST00000222402 FAT1Q14517 4588 aa7.89□□□□□ -1.15
UBE2D4-201ENST00000222402 RPL37P61927 97 aaKnown RBP7.88□□□□□ -1.15
UBE2D4-201ENST00000222402 H0YAA0 97 aa7.86□□□□□ -1.15
UBE2D4-201ENST00000222402 KRTAP3-1Q9BYR8 98 aa7.85□□□□□ -1.15
UBE2D4-201ENST00000222402 CRIPTQ9P021 101 aa7.85□□□□□ -1.15
UBE2D4-201ENST00000222402 HYDINQ4G0P3 5121 aa7.85□□□□□ -1.15
UBE2D4-201ENST00000222402 DYNC1H1Q14204 4646 aaKnown RBP7.83□□□□□ -1.16
UBE2D4-201ENST00000222402 KRTAP10-4P60372 401 aaPredicted RBP7.83□□□□□ -1.16
UBE2D4-201ENST00000222402 XP32Q5T750 250 aa7.82□□□□□ -1.16
UBE2D4-201ENST00000222402 SPINT4Q6UDR6 99 aa7.8□□□□□ -1.16
UBE2D4-201ENST00000222402 KRTAP10-8P60410 259 aa7.8□□□□□ -1.16
UBE2D4-201ENST00000222402 J3QL48 77 aa7.78□□□□□ -1.16
UBE2D4-201ENST00000222402 PKHD1P08F94 4074 aa7.72□□□□□ -1.17
UBE2D4-201ENST00000222402 FAT2Q9NYQ8 4349 aa7.7□□□□□ -1.18
UBE2D4-201ENST00000222402 SACSQ9NZJ4 4579 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms