RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 KRTAP13-2Q52LG2 175 aa7.46□□□□□ -1.22
SIPA1L3-201ENST00000222345 UNC80Q8N2C7 3258 aa7.44□□□□□ -1.22
SIPA1L3-201ENST00000222345 FRYLO94915 3013 aa7.42□□□□□ -1.22
SIPA1L3-201ENST00000222345 LAMA1P25391 3075 aa7.37□□□□□ -1.23
SIPA1L3-201ENST00000222345 SZT2Q5T011 3432 aa7.37□□□□□ -1.23
SIPA1L3-201ENST00000222345 CRYBG3Q68DQ2 2970 aa7.37□□□□□ -1.23
SIPA1L3-201ENST00000222345 HTTP42858 3142 aa7.32□□□□□ -1.24
SIPA1L3-201ENST00000222345 ASH1LQ9NR48 2969 aaKnown RBP7.32□□□□□ -1.24
SIPA1L3-201ENST00000222345 KRTAP10-8P60410 259 aa7.29□□□□□ -1.24
SIPA1L3-201ENST00000222345 SPEGQ15772 3267 aa7.27□□□□□ -1.25
SIPA1L3-201ENST00000222345 NBEAQ8NFP9 2946 aa7.25□□□□□ -1.25
SIPA1L3-201ENST00000222345 COL6A3P12111 3177 aa7.25□□□□□ -1.25
SIPA1L3-201ENST00000222345 CHD9Q3L8U1 2897 aa7.24□□□□□ -1.25
SIPA1L3-201ENST00000222345 BOD1L1Q8NFC6 3051 aa7.21□□□□□ -1.26
SIPA1L3-201ENST00000222345 DMXL2Q8TDJ6 3036 aa7.21□□□□□ -1.26
SIPA1L3-201ENST00000222345 TGP01266 2768 aa7.2□□□□□ -1.26
SIPA1L3-201ENST00000222345 TACC2O95359 2948 aa7.19□□□□□ -1.26
SIPA1L3-201ENST00000222345 VCANP13611 3396 aa7.18□□□□□ -1.26
SIPA1L3-201ENST00000222345 COL12A1Q99715 3063 aa7.17□□□□□ -1.26
SIPA1L3-201ENST00000222345 A0A1B0GVY2 172 aa7.15□□□□□ -1.26
SIPA1L3-201ENST00000222345 HIVEP1P15822 2718 aa7.14□□□□□ -1.27
SIPA1L3-201ENST00000222345 CFAP47Q6ZTR5 3102 aa7.13□□□□□ -1.27
SIPA1L3-201ENST00000222345 PRO2289Q9P1D8 64 aa7.1□□□□□ -1.27
SIPA1L3-201ENST00000222345 ZZEF1O43149 2961 aa7.08□□□□□ -1.28
SIPA1L3-201ENST00000222345 MYO15AQ9UKN7 3530 aa7.08□□□□□ -1.28
SIPA1L3-201ENST00000222345 XP32Q5T750 250 aa7.08□□□□□ -1.28
SIPA1L3-201ENST00000222345 NIPBLQ6KC79 2804 aaeCLIP7.06□□□□□ -1.28
SIPA1L3-201ENST00000222345 ADGRG4Q8IZF6 3080 aa7.05□□□□□ -1.28
SIPA1L3-201ENST00000222345 WDFY3Q8IZQ1 3526 aa7.05□□□□□ -1.28
SIPA1L3-201ENST00000222345 CELSR2Q9HCU4 2923 aa7.04□□□□□ -1.28
SIPA1L3-201ENST00000222345 KRTAP13-3Q3SY46 172 aa7.03□□□□□ -1.28
SIPA1L3-201ENST00000222345 KRTAP1-4P0C5Y4 121 aa7.02□□□□□ -1.29
SIPA1L3-201ENST00000222345 EYSQ5T1H1 3165 aa7.01□□□□□ -1.29
SIPA1L3-201ENST00000222345 TENM3Q9P273 2699 aa7.01□□□□□ -1.29
SIPA1L3-201ENST00000222345 KRTAP13-4Q3LI77 160 aa7□□□□□ -1.29
SIPA1L3-201ENST00000222345 INE1O15225 51 aa7□□□□□ -1.29
SIPA1L3-201ENST00000222345 FLNCQ14315 2725 aa6.99□□□□□ -1.29
SIPA1L3-201ENST00000222345 SPTBN5Q9NRC6 3674 aaKnown RBP6.98□□□□□ -1.29
SIPA1L3-201ENST00000222345 ATMQ13315 3056 aa6.98□□□□□ -1.29
SIPA1L3-201ENST00000222345 TPRXLQ17RH7 258 aa6.97□□□□□ -1.29
SIPA1L3-201ENST00000222345 KRTAP12-2P59991 146 aa6.96□□□□□ -1.29
SIPA1L3-201ENST00000222345 TNRC18O15417 2968 aaPredicted RBP6.96□□□□□ -1.3
SIPA1L3-201ENST00000222345 DMXL1Q9Y485 3027 aa6.95□□□□□ -1.3
SIPA1L3-201ENST00000222345 TENM1Q9UKZ4 2725 aa6.94□□□□□ -1.3
SIPA1L3-201ENST00000222345 KRTAP21-3Q3LHN1 58 aa6.93□□□□□ -1.3
SIPA1L3-201ENST00000222345 KRTAP10-10P60014 251 aa6.92□□□□□ -1.3
SIPA1L3-201ENST00000222345 NF1P21359 2839 aa6.89□□□□□ -1.31
SIPA1L3-201ENST00000222345 PDZD2O15018 2839 aa6.88□□□□□ -1.31
SIPA1L3-201ENST00000222345 KRTAP12-1P59990 96 aa6.85□□□□□ -1.31
SIPA1L3-201ENST00000222345 DCHS2Q6V1P9 2916 aa6.85□□□□□ -1.31
SIPA1L3-201ENST00000222345 DCHS1Q96JQ0 3298 aa6.82□□□□□ -1.32
SIPA1L3-201ENST00000222345 ASPMQ8IZT6 3477 aa6.82□□□□□ -1.32
SIPA1L3-201ENST00000222345 CELSR1Q9NYQ6 3014 aa6.8□□□□□ -1.32
SIPA1L3-201ENST00000222345 NBPF19A0A087WUL8 3843 aa6.8□□□□□ -1.32
SIPA1L3-201ENST00000222345 KRTAP15-1Q3LI76 137 aa6.79□□□□□ -1.32
SIPA1L3-201ENST00000222345 SRRM2Q9UQ35 2752 aaKnown RBP6.77□□□□□ -1.33
SIPA1L3-201ENST00000222345 FBN2P35556 2912 aa6.74□□□□□ -1.33
SIPA1L3-201ENST00000222345 ZANQ9Y493 2812 aa6.74□□□□□ -1.33
SIPA1L3-201ENST00000222345 LOC400499M0QZD8 3231 aa6.73□□□□□ -1.33
SIPA1L3-201ENST00000222345 HRNRQ86YZ3 2850 aaPredicted RBP6.72□□□□□ -1.33
SIPA1L3-201ENST00000222345 ZFHX3Q15911 3703 aa6.67□□□□□ -1.34
SIPA1L3-201ENST00000222345 TENM4Q6N022 2769 aa6.65□□□□□ -1.34
SIPA1L3-201ENST00000222345 LAMA5O15230 3695 aa6.64□□□□□ -1.35
SIPA1L3-201ENST00000222345 MXRA5Q9NR99 2828 aa6.63□□□□□ -1.35
SIPA1L3-201ENST00000222345 TENM2Q9NT68 2774 aa6.57□□□□□ -1.36
SIPA1L3-201ENST00000222345 ZFHX4Q86UP3 3567 aa6.56□□□□□ -1.36
SIPA1L3-201ENST00000222345 RELNP78509 3460 aa6.56□□□□□ -1.36
SIPA1L3-201ENST00000222345 PKD1L1Q8TDX9 2849 aa6.55□□□□□ -1.36
SIPA1L3-201ENST00000222345 CSMD1Q96PZ7 3565 aa6.54□□□□□ -1.36
SIPA1L3-201ENST00000222345 DMDP11532 3685 aa6.53□□□□□ -1.36
SIPA1L3-201ENST00000222345 KRTAP3-1Q9BYR8 98 aa6.51□□□□□ -1.37
SIPA1L3-201ENST00000222345 KRTAP10-6P60371 365 aaPredicted RBP6.5□□□□□ -1.37
SIPA1L3-201ENST00000222345 VWFP04275 2813 aa6.48□□□□□ -1.37
SIPA1L3-201ENST00000222345 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.38
SIPA1L3-201ENST00000222345 SPENQ96T58 3664 aaKnown RBP6.36□□□□□ -1.39
SIPA1L3-201ENST00000222345 MEGF8Q7Z7M0 2845 aa6.34□□□□□ -1.39
SIPA1L3-201ENST00000222345 SMG1Q96Q15 3661 aaKnown RBP6.31□□□□□ -1.4
SIPA1L3-201ENST00000222345 CUBNO60494 3623 aa6.26□□□□□ -1.41
SIPA1L3-201ENST00000222345 COL7A1Q02388 2944 aa6.25□□□□□ -1.41
SIPA1L3-201ENST00000222345 SVEP1Q4LDE5 3571 aa6.24□□□□□ -1.41
SIPA1L3-201ENST00000222345 KRTAP3-2Q9BYR7 98 aa6.19□□□□□ -1.42
SIPA1L3-201ENST00000222345 FBN3Q75N90 2809 aa6.17□□□□□ -1.42
SIPA1L3-201ENST00000222345 KRTAP10-12P60413 245 aa6.17□□□□□ -1.42
SIPA1L3-201ENST00000222345 CRCT1Q9UGL9 99 aa6.12□□□□□ -1.43
SIPA1L3-201ENST00000222345 KRTAP3-3Q9BYR6 98 aa6.12□□□□□ -1.43
SIPA1L3-201ENST00000222345 ALMS1Q8TCU4 4167 aa6.08□□□□□ -1.44
SIPA1L3-201ENST00000222345 MUC3AQ02505 3323 aa6.05□□□□□ -1.44
SIPA1L3-201ENST00000222345 KRTAP12-3P60328 96 aa6.04□□□□□ -1.44
SIPA1L3-201ENST00000222345 FBN1P35555 2871 aaKnown RBP6.01□□□□□ -1.45
SIPA1L3-201ENST00000222345 CSMD2Q7Z408 3487 aa5.98□□□□□ -1.45
SIPA1L3-201ENST00000222345 TRRAPQ9Y4A5 3859 aa5.96□□□□□ -1.45
SIPA1L3-201ENST00000222345 BSNQ9UPA5 3926 aa5.96□□□□□ -1.46
SIPA1L3-201ENST00000222345 VPS13CQ709C8 3753 aa5.94□□□□□ -1.46
SIPA1L3-201ENST00000222345 OTOGQ6ZRI0 2925 aa5.88□□□□□ -1.47
SIPA1L3-201ENST00000222345 LCE3AQ5TA76 89 aa5.87□□□□□ -1.47
SIPA1L3-201ENST00000222345 AKAP9Q99996 3911 aa5.81□□□□□ -1.48
SIPA1L3-201ENST00000222345 ANK3Q12955 4377 aaKnown RBP5.8□□□□□ -1.48
SIPA1L3-201ENST00000222345 CSMD3Q7Z407 3707 aa5.75□□□□□ -1.49
SIPA1L3-201ENST00000222345 KRTAP4-5Q9BYR2 181 aa5.74□□□□□ -1.49
SIPA1L3-201ENST00000222345 MT1HL1P0DM35 61 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms