RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 KALRNO60229 2985 aa7.85□□□□□ -1.15
UBR5-201ENST00000220959 LAMA3Q16787 3333 aa7.84□□□□□ -1.15
UBR5-201ENST00000220959 SRRM2Q9UQ35 2752 aaKnown RBP7.82□□□□□ -1.16
UBR5-201ENST00000220959 CRYBG3Q68DQ2 2970 aa7.82□□□□□ -1.16
UBR5-201ENST00000220959 VPS13AQ96RL7 3174 aa7.82□□□□□ -1.16
UBR5-201ENST00000220959 NF1P21359 2839 aa7.82□□□□□ -1.16
UBR5-201ENST00000220959 P0C880 135 aa7.81□□□□□ -1.16
UBR5-201ENST00000220959 TPRXLQ17RH7 258 aa7.81□□□□□ -1.16
UBR5-201ENST00000220959 TENM1Q9UKZ4 2725 aa7.81□□□□□ -1.16
UBR5-201ENST00000220959 TGP01266 2768 aa7.8□□□□□ -1.16
UBR5-201ENST00000220959 RANBP2P49792 3224 aaKnown RBP7.77□□□□□ -1.17
UBR5-201ENST00000220959 H0YAA0 97 aa7.76□□□□□ -1.17
UBR5-201ENST00000220959 FLNCQ14315 2725 aa7.75□□□□□ -1.17
UBR5-201ENST00000220959 KRTAP1-4P0C5Y4 121 aa7.75□□□□□ -1.17
UBR5-201ENST00000220959 HIVEP1P15822 2718 aa7.7□□□□□ -1.18
UBR5-201ENST00000220959 FRYLO94915 3013 aa7.69□□□□□ -1.18
UBR5-201ENST00000220959 DMXL2Q8TDJ6 3036 aa7.69□□□□□ -1.18
UBR5-201ENST00000220959 HTTP42858 3142 aa7.68□□□□□ -1.18
UBR5-201ENST00000220959 PDZD2O15018 2839 aa7.67□□□□□ -1.18
UBR5-201ENST00000220959 COL6A3P12111 3177 aa7.66□□□□□ -1.18
UBR5-201ENST00000220959 BRCA2P51587 3418 aa7.65□□□□□ -1.19
UBR5-201ENST00000220959 ASH1LQ9NR48 2969 aaKnown RBP7.64□□□□□ -1.19
UBR5-201ENST00000220959 NIPBLQ6KC79 2804 aaeCLIP7.62□□□□□ -1.196e-7■■□□□ 12.1
UBR5-201ENST00000220959 CFAP47Q6ZTR5 3102 aa7.6□□□□□ -1.19
UBR5-201ENST00000220959 KRTAP13-3Q3SY46 172 aa7.58□□□□□ -1.2
UBR5-201ENST00000220959 CELSR2Q9HCU4 2923 aa7.56□□□□□ -1.2
UBR5-201ENST00000220959 LAMA1P25391 3075 aa7.56□□□□□ -1.2
UBR5-201ENST00000220959 DNAH14Q0VDD8 3507 aa7.56□□□□□ -1.2
UBR5-201ENST00000220959 CDH23Q9H251 3354 aa7.54□□□□□ -1.2
UBR5-201ENST00000220959 TACC2O95359 2948 aa7.51□□□□□ -1.21
UBR5-201ENST00000220959 SPEGQ15772 3267 aa7.51□□□□□ -1.21
UBR5-201ENST00000220959 COL12A1Q99715 3063 aa7.5□□□□□ -1.21
UBR5-201ENST00000220959 VCANP13611 3396 aa7.47□□□□□ -1.21
UBR5-201ENST00000220959 BOD1L1Q8NFC6 3051 aa7.46□□□□□ -1.22
UBR5-201ENST00000220959 ADGRG4Q8IZF6 3080 aa7.39□□□□□ -1.23
UBR5-201ENST00000220959 ATMQ13315 3056 aa7.36□□□□□ -1.23
UBR5-201ENST00000220959 KRTAP12-2P59991 146 aa7.36□□□□□ -1.23
UBR5-201ENST00000220959 TENM4Q6N022 2769 aa7.34□□□□□ -1.23
UBR5-201ENST00000220959 TNRC18O15417 2968 aaPredicted RBP7.34□□□□□ -1.23
UBR5-201ENST00000220959 KRTAP13-4Q3LI77 160 aa7.32□□□□□ -1.24
UBR5-201ENST00000220959 SZT2Q5T011 3432 aa7.29□□□□□ -1.24
UBR5-201ENST00000220959 INE1O15225 51 aa7.27□□□□□ -1.25
UBR5-201ENST00000220959 ZZEF1O43149 2961 aa7.26□□□□□ -1.25
UBR5-201ENST00000220959 USP34Q70CQ2 3546 aa7.26□□□□□ -1.25
UBR5-201ENST00000220959 TENM2Q9NT68 2774 aa7.24□□□□□ -1.25
UBR5-201ENST00000220959 KRTAP15-1Q3LI76 137 aa7.23□□□□□ -1.25
UBR5-201ENST00000220959 DCHS2Q6V1P9 2916 aa7.21□□□□□ -1.26
UBR5-201ENST00000220959 CELSR1Q9NYQ6 3014 aa7.2□□□□□ -1.26
UBR5-201ENST00000220959 VWFP04275 2813 aa7.19□□□□□ -1.26
UBR5-201ENST00000220959 KRTAP12-1P59990 96 aa7.18□□□□□ -1.26
UBR5-201ENST00000220959 ZANQ9Y493 2812 aa7.16□□□□□ -1.26
UBR5-201ENST00000220959 NBEAQ8NFP9 2946 aa7.15□□□□□ -1.26
UBR5-201ENST00000220959 EYSQ5T1H1 3165 aa7.09□□□□□ -1.27
UBR5-201ENST00000220959 DMXL1Q9Y485 3027 aa7.05□□□□□ -1.28
UBR5-201ENST00000220959 PKD1L1Q8TDX9 2849 aa7.01□□□□□ -1.29
UBR5-201ENST00000220959 MXRA5Q9NR99 2828 aa6.96□□□□□ -1.3
UBR5-201ENST00000220959 ZFHX4Q86UP3 3567 aa6.96□□□□□ -1.3
UBR5-201ENST00000220959 LOC400499M0QZD8 3231 aa6.95□□□□□ -1.3
UBR5-201ENST00000220959 ZFHX3Q15911 3703 aa6.93□□□□□ -1.3
UBR5-201ENST00000220959 COL7A1Q02388 2944 aa6.93□□□□□ -1.3
UBR5-201ENST00000220959 CRCT1Q9UGL9 99 aa6.91□□□□□ -1.3
UBR5-201ENST00000220959 FBN2P35556 2912 aa6.91□□□□□ -1.3
UBR5-201ENST00000220959 KRTAP3-1Q9BYR8 98 aa6.9□□□□□ -1.3
UBR5-201ENST00000220959 NBPF19A0A087WUL8 3843 aa6.86□□□□□ -1.31
UBR5-201ENST00000220959 DCHS1Q96JQ0 3298 aa6.84□□□□□ -1.31
UBR5-201ENST00000220959 ASPMQ8IZT6 3477 aa6.83□□□□□ -1.32
UBR5-201ENST00000220959 SPTBN5Q9NRC6 3674 aaKnown RBP6.83□□□□□ -1.32
UBR5-201ENST00000220959 WDFY3Q8IZQ1 3526 aa6.8□□□□□ -1.32
UBR5-201ENST00000220959 KRTAP10-12P60413 245 aa6.77□□□□□ -1.32
UBR5-201ENST00000220959 KRTAP10-6P60371 365 aaPredicted RBP6.75□□□□□ -1.33
UBR5-201ENST00000220959 HRNRQ86YZ3 2850 aaPredicted RBP6.72□□□□□ -1.33
UBR5-201ENST00000220959 MEGF8Q7Z7M0 2845 aa6.7□□□□□ -1.34
UBR5-201ENST00000220959 MYO15AQ9UKN7 3530 aa6.68□□□□□ -1.34
UBR5-201ENST00000220959 OTOGQ6ZRI0 2925 aa6.65□□□□□ -1.34
UBR5-201ENST00000220959 KRTAP23-1A1A580 65 aa6.62□□□□□ -1.35
UBR5-201ENST00000220959 RELNP78509 3460 aa6.57□□□□□ -1.36
UBR5-201ENST00000220959 KRTAP12-3P60328 96 aa6.55□□□□□ -1.36
UBR5-201ENST00000220959 CSMD1Q96PZ7 3565 aa6.53□□□□□ -1.36
UBR5-201ENST00000220959 MT1HL1P0DM35 61 aa6.51□□□□□ -1.37
UBR5-201ENST00000220959 LAMA5O15230 3695 aa6.46□□□□□ -1.38
UBR5-201ENST00000220959 KRTAP3-3Q9BYR6 98 aa6.44□□□□□ -1.38
UBR5-201ENST00000220959 KRTAP3-2Q9BYR7 98 aa6.44□□□□□ -1.38
UBR5-201ENST00000220959 LCE3AQ5TA76 89 aa6.42□□□□□ -1.38
UBR5-201ENST00000220959 FBN3Q75N90 2809 aa6.42□□□□□ -1.38
UBR5-201ENST00000220959 KRTAP10-5P60370 271 aa6.37□□□□□ -1.39
UBR5-201ENST00000220959 KRTAP8-1Q8IUC2 63 aa6.33□□□□□ -1.4
UBR5-201ENST00000220959 SPENQ96T58 3664 aaKnown RBP6.31□□□□□ -1.4
UBR5-201ENST00000220959 ANK3Q12955 4377 aaKnown RBP6.3□□□□□ -1.4
UBR5-201ENST00000220959 KRTAP4-5Q9BYR2 181 aa6.29□□□□□ -1.4
UBR5-201ENST00000220959 FBN1P35555 2871 aaKnown RBP6.19□□□□□ -1.42
UBR5-201ENST00000220959 LORP23490 312 aaPredicted RBP6.18□□□□□ -1.42
UBR5-201ENST00000220959 HUWE1Q7Z6Z7 4374 aaKnown RBP6.17□□□□□ -1.42
UBR5-201ENST00000220959 MUC3AQ02505 3323 aa6.15□□□□□ -1.42
UBR5-201ENST00000220959 SMG1Q96Q15 3661 aaKnown RBP6.14□□□□□ -1.43
UBR5-201ENST00000220959 KRTAP10-4P60372 401 aaPredicted RBP6.11□□□□□ -1.43
UBR5-201ENST00000220959 TRRAPQ9Y4A5 3859 aa6.1□□□□□ -1.43
UBR5-201ENST00000220959 CUBNO60494 3623 aa6.09□□□□□ -1.44
UBR5-201ENST00000220959 CSMD2Q7Z408 3487 aa6.05□□□□□ -1.44
UBR5-201ENST00000220959 ALMS1Q8TCU4 4167 aa6.03□□□□□ -1.44
UBR5-201ENST00000220959 SVEP1Q4LDE5 3571 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms