RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 APCP25054 2843 aa8.98□□□□□ -0.97
NDFIP2-201ENST00000218652 TENM3Q9P273 2699 aa8.97□□□□□ -0.97
NDFIP2-201ENST00000218652 KRTAP26-1Q6PEX3 210 aa8.97□□□□□ -0.97
NDFIP2-201ENST00000218652 RPL37P61927 97 aaKnown RBP8.94□□□□□ -0.98
NDFIP2-201ENST00000218652 SVEP1Q4LDE5 3571 aa8.94□□□□□ -0.98
NDFIP2-201ENST00000218652 A0A0A0MQY5 61 aa8.92□□□□□ -0.98
NDFIP2-201ENST00000218652 NIPBLQ6KC79 2804 aaeCLIP8.89□□□□□ -0.99
NDFIP2-201ENST00000218652 CSMD1Q96PZ7 3565 aa8.88□□□□□ -0.99
NDFIP2-201ENST00000218652 DCHS2Q6V1P9 2916 aa8.87□□□□□ -0.99
NDFIP2-201ENST00000218652 PANO1I0J062 215 aa8.86□□□□□ -0.99
NDFIP2-201ENST00000218652 CRYBG3Q68DQ2 2970 aa8.86□□□□□ -0.99
NDFIP2-201ENST00000218652 KRTAP10-1P60331 282 aa8.84□□□□□ -0.99
NDFIP2-201ENST00000218652 KRTAP29-1A8MX34 341 aaPredicted RBP8.84□□□□□ -0.99
NDFIP2-201ENST00000218652 KRTAP4-16G5E9R7 235 aaPredicted RBP8.84□□□□□ -0.99
NDFIP2-201ENST00000218652 ROMO1P60602 79 aa8.84□□□□□ -0.99
NDFIP2-201ENST00000218652 KRTAP10-2P60368 255 aa8.84□□□□□ -1
NDFIP2-201ENST00000218652 SPATA8Q6RVD6 105 aa8.83□□□□□ -1
NDFIP2-201ENST00000218652 M0QZ58 72 aa8.81□□□□□ -1
NDFIP2-201ENST00000218652 Q6ZR54 194 aa8.81□□□□□ -1
NDFIP2-201ENST00000218652 H1FX-AS1Q4G0G2 97 aa8.81□□□□□ -1
NDFIP2-201ENST00000218652 A0A087X002 238 aa8.79□□□□□ -1
NDFIP2-201ENST00000218652 NOTCH2NLQ7Z3S9 236 aa8.79□□□□□ -1
NDFIP2-201ENST00000218652 CELSR1Q9NYQ6 3014 aa8.79□□□□□ -1
NDFIP2-201ENST00000218652 SEC61BP60468 96 aaKnown RBP8.77□□□□□ -1.01
NDFIP2-201ENST00000218652 NF1P21359 2839 aa8.74□□□□□ -1.01
NDFIP2-201ENST00000218652 Q5VSD8 79 aa8.74□□□□□ -1.01
NDFIP2-201ENST00000218652 CUBNO60494 3623 aa8.71□□□□□ -1.01
NDFIP2-201ENST00000218652 BSNQ9UPA5 3926 aa8.71□□□□□ -1.02
NDFIP2-201ENST00000218652 A8MU10 97 aa8.68□□□□□ -1.02
NDFIP2-201ENST00000218652 ADM2Q7Z4H4 148 aa8.68□□□□□ -1.02
NDFIP2-201ENST00000218652 ZANQ9Y493 2812 aa8.66□□□□□ -1.02
NDFIP2-201ENST00000218652 HRNRQ86YZ3 2850 aaPredicted RBP8.66□□□□□ -1.02
NDFIP2-201ENST00000218652 KRTAP11-1Q8IUC1 163 aa8.64□□□□□ -1.03
NDFIP2-201ENST00000218652 LCE6AA0A183 80 aa8.61□□□□□ -1.03
NDFIP2-201ENST00000218652 CSMD2Q7Z408 3487 aa8.6□□□□□ -1.03
NDFIP2-201ENST00000218652 ASB16-AS1Q495Z4 193 aa8.6□□□□□ -1.03
NDFIP2-201ENST00000218652 TENM1Q9UKZ4 2725 aa8.57□□□□□ -1.04
NDFIP2-201ENST00000218652 A6NN06 94 aa8.55□□□□□ -1.04
NDFIP2-201ENST00000218652 PLAC4Q8WY50 150 aa8.54□□□□□ -1.04
NDFIP2-201ENST00000218652 KRTAP7-1Q8IUC3 87 aa8.53□□□□□ -1.04
NDFIP2-201ENST00000218652 VPS13CQ709C8 3753 aa8.5□□□□□ -1.05
NDFIP2-201ENST00000218652 KRTAP16-1A8MUX0 517 aa8.5□□□□□ -1.05
NDFIP2-201ENST00000218652 KRTAP25-1Q3LHN0 102 aa8.5□□□□□ -1.05
NDFIP2-201ENST00000218652 PKD1L1Q8TDX9 2849 aa8.47□□□□□ -1.05
NDFIP2-201ENST00000218652 FBN2P35556 2912 aa8.44□□□□□ -1.06
NDFIP2-201ENST00000218652 NDUFAF8A1L188 74 aa8.43□□□□□ -1.06
NDFIP2-201ENST00000218652 Q6ZRN7 208 aaPredicted RBP8.43□□□□□ -1.06
NDFIP2-201ENST00000218652 A8MUU9 505 aa8.42□□□□□ -1.06
NDFIP2-201ENST00000218652 KRTAP13-2Q52LG2 175 aa8.42□□□□□ -1.06
NDFIP2-201ENST00000218652 PDZD2O15018 2839 aa8.42□□□□□ -1.06
NDFIP2-201ENST00000218652 ZFHX3Q15911 3703 aa8.41□□□□□ -1.06
NDFIP2-201ENST00000218652 SRRM2Q9UQ35 2752 aaKnown RBP8.38□□□□□ -1.07
NDFIP2-201ENST00000218652 TENM2Q9NT68 2774 aa8.38□□□□□ -1.07
NDFIP2-201ENST00000218652 MXRA5Q9NR99 2828 aa8.36□□□□□ -1.07
NDFIP2-201ENST00000218652 KRTAP13-1Q8IUC0 172 aa8.35□□□□□ -1.07
NDFIP2-201ENST00000218652 C20orf166-AS1Q96NR2 134 aa8.33□□□□□ -1.08
NDFIP2-201ENST00000218652 RPS29P62273 56 aaKnown RBP8.31□□□□□ -1.08
NDFIP2-201ENST00000218652 VWFP04275 2813 aa8.29□□□□□ -1.08
NDFIP2-201ENST00000218652 TGP01266 2768 aa8.23□□□□□ -1.09
NDFIP2-201ENST00000218652 NBPF19A0A087WUL8 3843 aa8.18□□□□□ -1.1
NDFIP2-201ENST00000218652 TNP1P09430 55 aa8.16□□□□□ -1.1
NDFIP2-201ENST00000218652 C10orf95Q9H7T3 257 aa8.14□□□□□ -1.11
NDFIP2-201ENST00000218652 ZNF469Q96JG9 3925 aaPredicted RBP8.07□□□□□ -1.12
NDFIP2-201ENST00000218652 OTOGQ6ZRI0 2925 aa8.04□□□□□ -1.12
NDFIP2-201ENST00000218652 H0YAA0 97 aa7.96□□□□□ -1.13
NDFIP2-201ENST00000218652 KRTAP1-4P0C5Y4 121 aa7.95□□□□□ -1.14
NDFIP2-201ENST00000218652 KRTAP10-8P60410 259 aa7.95□□□□□ -1.14
NDFIP2-201ENST00000218652 XP32Q5T750 250 aa7.91□□□□□ -1.14
NDFIP2-201ENST00000218652 PP632Q6XCG6 107 aa7.89□□□□□ -1.15
NDFIP2-201ENST00000218652 A0A1B0GVY2 172 aa7.88□□□□□ -1.15
NDFIP2-201ENST00000218652 P0C880 135 aa7.88□□□□□ -1.15
NDFIP2-201ENST00000218652 FBN1P35555 2871 aaKnown RBP7.88□□□□□ -1.15
NDFIP2-201ENST00000218652 TRRAPQ9Y4A5 3859 aa7.73□□□□□ -1.17
NDFIP2-201ENST00000218652 AKAP9Q99996 3911 aa7.7□□□□□ -1.18
NDFIP2-201ENST00000218652 KRTAP10-10P60014 251 aa7.67□□□□□ -1.18
NDFIP2-201ENST00000218652 COL7A1Q02388 2944 aa7.67□□□□□ -1.18
NDFIP2-201ENST00000218652 TPRXLQ17RH7 258 aa7.64□□□□□ -1.19
NDFIP2-201ENST00000218652 FBN3Q75N90 2809 aa7.64□□□□□ -1.19
NDFIP2-201ENST00000218652 KRTAP13-3Q3SY46 172 aa7.62□□□□□ -1.19
NDFIP2-201ENST00000218652 KRTAP21-3Q3LHN1 58 aa7.58□□□□□ -1.2
NDFIP2-201ENST00000218652 MEGF8Q7Z7M0 2845 aa7.53□□□□□ -1.2
NDFIP2-201ENST00000218652 ANK3Q12955 4377 aaKnown RBP7.48□□□□□ -1.21
NDFIP2-201ENST00000218652 PRO2289Q9P1D8 64 aa7.47□□□□□ -1.21
NDFIP2-201ENST00000218652 KRTAP12-2P59991 146 aa7.45□□□□□ -1.22
NDFIP2-201ENST00000218652 KRTAP12-1P59990 96 aa7.32□□□□□ -1.24
NDFIP2-201ENST00000218652 KRTAP13-4Q3LI77 160 aa7.27□□□□□ -1.25
NDFIP2-201ENST00000218652 KRTAP3-1Q9BYR8 98 aa7.26□□□□□ -1.25
NDFIP2-201ENST00000218652 CSMD3Q7Z407 3707 aa7.21□□□□□ -1.25
NDFIP2-201ENST00000218652 ANK2Q01484 3957 aa7.12□□□□□ -1.27
NDFIP2-201ENST00000218652 KRTAP10-6P60371 365 aaPredicted RBP7.1□□□□□ -1.27
NDFIP2-201ENST00000218652 KRTAP15-1Q3LI76 137 aa7.03□□□□□ -1.28
NDFIP2-201ENST00000218652 LYSTQ99698 3801 aa6.88□□□□□ -1.31
NDFIP2-201ENST00000218652 DNHD1Q96M86 4753 aa6.81□□□□□ -1.32
NDFIP2-201ENST00000218652 KRTAP3-2Q9BYR7 98 aa6.8□□□□□ -1.32
NDFIP2-201ENST00000218652 DNAH10Q8IVF4 4471 aa6.75□□□□□ -1.33
NDFIP2-201ENST00000218652 KRTAP3-3Q9BYR6 98 aa6.75□□□□□ -1.33
NDFIP2-201ENST00000218652 HUWE1Q7Z6Z7 4374 aaKnown RBP6.74□□□□□ -1.33
NDFIP2-201ENST00000218652 CMYA5Q8N3K9 4069 aa6.73□□□□□ -1.33
NDFIP2-201ENST00000218652 MT1HL1P0DM35 61 aa6.72□□□□□ -1.33
NDFIP2-201ENST00000218652 CRCT1Q9UGL9 99 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms