RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 IGLV7-43P04211 117 aa7.86□□□□□ -1.15
SRP54-201ENST00000216774 NOTCH2NLQ7Z3S9 236 aa7.86□□□□□ -1.15
SRP54-201ENST00000216774 DNAH17Q9UFH2 4485 aa7.86□□□□□ -1.15
SRP54-201ENST00000216774 LOC101927531A0A1B0GV80 90 aa7.86□□□□□ -1.15
SRP54-201ENST00000216774 CHKB-CPT1BH3BT56 60 aa7.85□□□□□ -1.15
SRP54-201ENST00000216774 Q75L30 129 aa7.85□□□□□ -1.15
SRP54-201ENST00000216774 C1orf134Q5TEV5 83 aa7.83□□□□□ -1.16
SRP54-201ENST00000216774 DNAH2Q9P225 4427 aa7.82□□□□□ -1.16
SRP54-201ENST00000216774 SSBP3-AS1Q7Z2R9 100 aa7.81□□□□□ -1.16
SRP54-201ENST00000216774 FRAS1Q86XX4 4008 aa7.8□□□□□ -1.16
SRP54-201ENST00000216774 KRTAP13-3Q3SY46 172 aa7.8□□□□□ -1.16
SRP54-201ENST00000216774 SPINK6Q6UWN8 80 aa7.8□□□□□ -1.16
SRP54-201ENST00000216774 CIRBP-AS1Q8TBR5 109 aa7.8□□□□□ -1.16
SRP54-201ENST00000216774 HRES1P13985 223 aa7.8□□□□□ -1.16
SRP54-201ENST00000216774 LINC01558Q9Y6Z2 57 aa7.8□□□□□ -1.16
SRP54-201ENST00000216774 DNHD1Q96M86 4753 aa7.79□□□□□ -1.16
SRP54-201ENST00000216774 C8orf87E5RJ46 101 aa7.79□□□□□ -1.16
SRP54-201ENST00000216774 Q5W150 140 aa7.77□□□□□ -1.17
SRP54-201ENST00000216774 MEGF8Q7Z7M0 2845 aa7.77□□□□□ -1.17
SRP54-201ENST00000216774 KMT2AQ03164 3969 aa7.77□□□□□ -1.17
SRP54-201ENST00000216774 PMAIP1Q13794 54 aa7.76□□□□□ -1.17
SRP54-201ENST00000216774 A8MU10 97 aa7.76□□□□□ -1.17
SRP54-201ENST00000216774 SPAG11AQ6PDA7 123 aa7.76□□□□□ -1.17
SRP54-201ENST00000216774 A6NED7 52 aa7.75□□□□□ -1.17
SRP54-201ENST00000216774 TGP01266 2768 aa7.73□□□□□ -1.17
SRP54-201ENST00000216774 LCA10Q71F78 164 aa7.72□□□□□ -1.17
SRP54-201ENST00000216774 ATP11AUNQ6ZP68 121 aa7.71□□□□□ -1.17
SRP54-201ENST00000216774 LY6G6CO95867 125 aa7.7□□□□□ -1.18
SRP54-201ENST00000216774 LINC00313P59037 77 aa7.7□□□□□ -1.18
SRP54-201ENST00000216774 CDC42SE1Q9NRR8 79 aa7.7□□□□□ -1.18
SRP54-201ENST00000216774 FAM229AH3BQW9 127 aa7.69□□□□□ -1.18
SRP54-201ENST00000216774 ACYP2P14621 99 aa7.68□□□□□ -1.18
SRP54-201ENST00000216774 ALMS1Q8TCU4 4167 aa7.68□□□□□ -1.18
SRP54-201ENST00000216774 KRTAP10-2P60368 255 aa7.67□□□□□ -1.18
SRP54-201ENST00000216774 KRTAP13-2Q52LG2 175 aa7.66□□□□□ -1.18
SRP54-201ENST00000216774 DMAC1Q96GE9 116 aa7.66□□□□□ -1.18
SRP54-201ENST00000216774 Q6ZSA8 131 aa7.65□□□□□ -1.18
SRP54-201ENST00000216774 SPTSSBQ8NFR3 76 aa7.65□□□□□ -1.18
SRP54-201ENST00000216774 DNAH11Q96DT5 4516 aa7.64□□□□□ -1.19
SRP54-201ENST00000216774 PRR26Q8N8Z3 221 aa7.63□□□□□ -1.19
SRP54-201ENST00000216774 DNAH6Q9C0G6 4158 aa7.63□□□□□ -1.19
SRP54-201ENST00000216774 IGKV2-30P06310 120 aa7.62□□□□□ -1.19
SRP54-201ENST00000216774 DNAH5Q8TE73 4624 aa7.62□□□□□ -1.19
SRP54-201ENST00000216774 SPINK7P58062 85 aa7.61□□□□□ -1.19
SRP54-201ENST00000216774 KRTAP16-1A8MUX0 517 aa7.6□□□□□ -1.19
SRP54-201ENST00000216774 KRTAP10-1P60331 282 aa7.59□□□□□ -1.19
SRP54-201ENST00000216774 A6NN06 94 aa7.58□□□□□ -1.2
SRP54-201ENST00000216774 SEC61GP60059 68 aa7.58□□□□□ -1.2
SRP54-201ENST00000216774 KTN1-AS1Q86SY8 53 aa7.58□□□□□ -1.2
SRP54-201ENST00000216774 KRTAP1-4P0C5Y4 121 aa7.57□□□□□ -1.2
SRP54-201ENST00000216774 RETNLBQ9BQ08 111 aa7.56□□□□□ -1.2
SRP54-201ENST00000216774 LRP1BQ9NZR2 4599 aa7.54□□□□□ -1.2
SRP54-201ENST00000216774 PKD1P98161 4303 aa7.53□□□□□ -1.2
SRP54-201ENST00000216774 C4orf48Q5BLP8 95 aa7.51□□□□□ -1.21
SRP54-201ENST00000216774 SPINK1P00995 79 aa7.49□□□□□ -1.21
SRP54-201ENST00000216774 PLA2G1BP04054 148 aaKnown RBP7.49□□□□□ -1.21
SRP54-201ENST00000216774 A0A1B0GU69 56 aa7.48□□□□□ -1.21
SRP54-201ENST00000216774 TYMSOSQ8TAI1 123 aa7.48□□□□□ -1.21
SRP54-201ENST00000216774 FAT2Q9NYQ8 4349 aa7.47□□□□□ -1.21
SRP54-201ENST00000216774 IGKV2D-30A0A075B6S6 120 aa7.47□□□□□ -1.21
SRP54-201ENST00000216774 C7orf65Q6ZTY9 151 aa7.45□□□□□ -1.22
SRP54-201ENST00000216774 VPS13BQ7Z7G8 4022 aa7.43□□□□□ -1.22
SRP54-201ENST00000216774 RPS29P62273 56 aaKnown RBP7.43□□□□□ -1.22
SRP54-201ENST00000216774 SPATA8Q6RVD6 105 aa7.4□□□□□ -1.22
SRP54-201ENST00000216774 HYDINQ4G0P3 5121 aa7.4□□□□□ -1.23
SRP54-201ENST00000216774 LINC00304Q8N9R0 145 aa7.38□□□□□ -1.23
SRP54-201ENST00000216774 RBM12B-AS1Q9P1G2 102 aa7.38□□□□□ -1.23
SRP54-201ENST00000216774 UQCR11O14957 56 aa7.38□□□□□ -1.23
SRP54-201ENST00000216774 MIR22HGQ0VDD5 57 aa7.35□□□□□ -1.23
SRP54-201ENST00000216774 Q8N1X5 172 aa7.29□□□□□ -1.24
SRP54-201ENST00000216774 SACSQ9NZJ4 4579 aa7.27□□□□□ -1.25
SRP54-201ENST00000216774 C20orf166-AS1Q96NR2 134 aa7.26□□□□□ -1.25
SRP54-201ENST00000216774 A8MUU9 505 aa7.26□□□□□ -1.25
SRP54-201ENST00000216774 PKHD1P08F94 4074 aa7.25□□□□□ -1.25
SRP54-201ENST00000216774 C9orf92A6NGG3 77 aa7.2□□□□□ -1.26
SRP54-201ENST00000216774 SMR3BP02814 79 aaPredicted RBP7.2□□□□□ -1.26
SRP54-201ENST00000216774 KRTAP10-4P60372 401 aaPredicted RBP7.18□□□□□ -1.26
SRP54-201ENST00000216774 PRAC1Q96KF2 57 aa7.17□□□□□ -1.26
SRP54-201ENST00000216774 PKHD1L1Q86WI1 4243 aa7.16□□□□□ -1.26
SRP54-201ENST00000216774 DYNC1H1Q14204 4646 aaKnown RBP7.16□□□□□ -1.26
SRP54-201ENST00000216774 A0A1B0GVY2 172 aa7.15□□□□□ -1.26
SRP54-201ENST00000216774 ADM2Q7Z4H4 148 aa7.15□□□□□ -1.26
SRP54-201ENST00000216774 KRTAP3-1Q9BYR8 98 aa7.14□□□□□ -1.27
SRP54-201ENST00000216774 APOBP04114 4563 aaKnown RBP7.13□□□□□ -1.27
SRP54-201ENST00000216774 H0YAA0 97 aa7.08□□□□□ -1.28
SRP54-201ENST00000216774 FAT1Q14517 4588 aa7.08□□□□□ -1.28
SRP54-201ENST00000216774 A0A1B0GU33 70 aa7.06□□□□□ -1.28
SRP54-201ENST00000216774 COX6B2Q6YFQ2 88 aa7.04□□□□□ -1.28
SRP54-201ENST00000216774 H1FX-AS1Q4G0G2 97 aa7.03□□□□□ -1.28
SRP54-201ENST00000216774 LINC01554Q52M75 96 aa7.02□□□□□ -1.29
SRP54-201ENST00000216774 CSAG1Q6PB30 78 aa6.99□□□□□ -1.29
SRP54-201ENST00000216774 FLG2Q5D862 2391 aaPredicted RBP6.97□□□□□ -1.29
SRP54-201ENST00000216774 RYR2Q92736 4967 aa6.92□□□□□ -1.3
SRP54-201ENST00000216774 KRTAP10-8P60410 259 aa6.92□□□□□ -1.3
SRP54-201ENST00000216774 FAT3Q8TDW7 4589 aa6.9□□□□□ -1.3
SRP54-201ENST00000216774 RPL37P61927 97 aaKnown RBP6.89□□□□□ -1.31
SRP54-201ENST00000216774 K7ERS5 55 aa6.88□□□□□ -1.31
SRP54-201ENST00000216774 KMT2CQ8NEZ4 4911 aaKnown RBP6.86□□□□□ -1.31
SRP54-201ENST00000216774 TNXBP22105 4242 aa6.86□□□□□ -1.31
SRP54-201ENST00000216774 KRTAP3-3Q9BYR6 98 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms