RNA–Protein interactions for RNA: ENST00000181839.8

CDK13-201, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK13, Length 7,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-201ENST00000181839 KMT2BQ9UMN6 2715 aaPredicted RBP9.59□□□□□ -0.87
CDK13-201ENST00000181839 APCP25054 2843 aa9.57□□□□□ -0.88
CDK13-201ENST00000181839 ZNF292O60281 2723 aa9.56□□□□□ -0.88
CDK13-201ENST00000181839 TRANK1O15050 2925 aa9.55□□□□□ -0.88
CDK13-201ENST00000181839 A6NN06 94 aa9.52□□□□□ -0.88
CDK13-201ENST00000181839 USP34Q70CQ2 3546 aa9.51□□□□□ -0.89
CDK13-201ENST00000181839 KRTAP13-1Q8IUC0 172 aa9.5□□□□□ -0.89
CDK13-201ENST00000181839 DMXL2Q8TDJ6 3036 aa9.5□□□□□ -0.89
CDK13-201ENST00000181839 LRBAP50851 2863 aa9.49□□□□□ -0.89
CDK13-201ENST00000181839 DSPP15924 2871 aaKnown RBP9.47□□□□□ -0.89
CDK13-201ENST00000181839 ASH1LQ9NR48 2969 aaKnown RBP9.47□□□□□ -0.89
CDK13-201ENST00000181839 IGSF10Q6WRI0 2623 aa9.44□□□□□ -0.9
CDK13-201ENST00000181839 KRTAP21-3Q3LHN1 58 aa9.44□□□□□ -0.9
CDK13-201ENST00000181839 PP632Q6XCG6 107 aa9.4□□□□□ -0.91
CDK13-201ENST00000181839 NSD1Q96L73 2696 aaPredicted RBP9.39□□□□□ -0.91
CDK13-201ENST00000181839 BOD1L1Q8NFC6 3051 aa9.37□□□□□ -0.91
CDK13-201ENST00000181839 ATMQ13315 3056 aa9.36□□□□□ -0.91
CDK13-201ENST00000181839 SPTBN5Q9NRC6 3674 aaKnown RBP9.35□□□□□ -0.91
CDK13-201ENST00000181839 ASPMQ8IZT6 3477 aa9.35□□□□□ -0.91
CDK13-201ENST00000181839 FRYLO94915 3013 aa9.35□□□□□ -0.91
CDK13-201ENST00000181839 TPRXLQ17RH7 258 aa9.34□□□□□ -0.91
CDK13-201ENST00000181839 COL12A1Q99715 3063 aa9.3□□□□□ -0.92
CDK13-201ENST00000181839 UTP20O75691 2785 aaKnown RBP9.28□□□□□ -0.92
CDK13-201ENST00000181839 NBPF19A0A087WUL8 3843 aa9.25□□□□□ -0.93
CDK13-201ENST00000181839 HIVEP1P15822 2718 aa9.24□□□□□ -0.93
CDK13-201ENST00000181839 KRTAP1-4P0C5Y4 121 aa9.24□□□□□ -0.93
CDK13-201ENST00000181839 NBEAQ8NFP9 2946 aa9.23□□□□□ -0.93
CDK13-201ENST00000181839 H0YAA0 97 aa9.22□□□□□ -0.93
CDK13-201ENST00000181839 TACC2O95359 2948 aa9.2□□□□□ -0.94
CDK13-201ENST00000181839 UBR5O95071 2799 aaPredicted RBP9.2□□□□□ -0.94
CDK13-201ENST00000181839 ADGRG4Q8IZF6 3080 aa9.19□□□□□ -0.94
CDK13-201ENST00000181839 MYO15AQ9UKN7 3530 aa9.19□□□□□ -0.94
CDK13-201ENST00000181839 LOC400499M0QZD8 3231 aa9.15□□□□□ -0.95
CDK13-201ENST00000181839 ZZEF1O43149 2961 aa9.12□□□□□ -0.95
CDK13-201ENST00000181839 EYSQ5T1H1 3165 aa9.12□□□□□ -0.95
CDK13-201ENST00000181839 KRTAP13-3Q3SY46 172 aa9.12□□□□□ -0.95
CDK13-201ENST00000181839 WDFY3Q8IZQ1 3526 aa9.11□□□□□ -0.95
CDK13-201ENST00000181839 DCHS1Q96JQ0 3298 aa9.09□□□□□ -0.95
CDK13-201ENST00000181839 ZFHX4Q86UP3 3567 aa9.07□□□□□ -0.96
CDK13-201ENST00000181839 CRCT1Q9UGL9 99 aa9.07□□□□□ -0.96
CDK13-201ENST00000181839 ITPR1Q14643 2758 aa9.03□□□□□ -0.96
CDK13-201ENST00000181839 KRTAP12-2P59991 146 aa9.02□□□□□ -0.97
CDK13-201ENST00000181839 TENM1Q9UKZ4 2725 aa8.92□□□□□ -0.98
CDK13-201ENST00000181839 CELSR2Q9HCU4 2923 aa8.9□□□□□ -0.98
CDK13-201ENST00000181839 KRTAP15-1Q3LI76 137 aa8.87□□□□□ -0.99
CDK13-201ENST00000181839 LAMA5O15230 3695 aa8.87□□□□□ -0.99
CDK13-201ENST00000181839 DMXL1Q9Y485 3027 aa8.85□□□□□ -0.99
CDK13-201ENST00000181839 TNRC18O15417 2968 aaPredicted RBP8.83□□□□□ -1
CDK13-201ENST00000181839 CELSR1Q9NYQ6 3014 aa8.83□□□□□ -1
CDK13-201ENST00000181839 TENM4Q6N022 2769 aa8.82□□□□□ -1
CDK13-201ENST00000181839 FLNCQ14315 2725 aa8.79□□□□□ -1
CDK13-201ENST00000181839 CSMD1Q96PZ7 3565 aa8.73□□□□□ -1.01
CDK13-201ENST00000181839 TENM2Q9NT68 2774 aa8.73□□□□□ -1.01
CDK13-201ENST00000181839 DCHS2Q6V1P9 2916 aa8.71□□□□□ -1.01
CDK13-201ENST00000181839 KRTAP13-4Q3LI77 160 aa8.64□□□□□ -1.03
CDK13-201ENST00000181839 NF1P21359 2839 aa8.6□□□□□ -1.03
CDK13-201ENST00000181839 RELNP78509 3460 aa8.6□□□□□ -1.03
CDK13-201ENST00000181839 FBN2P35556 2912 aa8.58□□□□□ -1.04
CDK13-201ENST00000181839 TGP01266 2768 aa8.56□□□□□ -1.04
CDK13-201ENST00000181839 TENM3Q9P273 2699 aa8.54□□□□□ -1.04
CDK13-201ENST00000181839 ZANQ9Y493 2812 aa8.53□□□□□ -1.04
CDK13-201ENST00000181839 KRTAP12-1P59990 96 aa8.49□□□□□ -1.05
CDK13-201ENST00000181839 VWFP04275 2813 aa8.49□□□□□ -1.05
CDK13-201ENST00000181839 PKD1L1Q8TDX9 2849 aa8.48□□□□□ -1.05
CDK13-201ENST00000181839 ZFHX3Q15911 3703 aa8.46□□□□□ -1.05
CDK13-201ENST00000181839 SPENQ96T58 3664 aaKnown RBP8.45□□□□□ -1.06
CDK13-201ENST00000181839 HRNRQ86YZ3 2850 aaPredicted RBP8.45□□□□□ -1.06
CDK13-201ENST00000181839 NIPBLQ6KC79 2804 aaeCLIP8.43□□□□□ -1.06
CDK13-201ENST00000181839 PDZD2O15018 2839 aa8.39□□□□□ -1.07
CDK13-201ENST00000181839 SMG1Q96Q15 3661 aaKnown RBP8.38□□□□□ -1.07
CDK13-201ENST00000181839 DMDP11532 3685 aa8.3□□□□□ -1.08
CDK13-201ENST00000181839 KRTAP10-12P60413 245 aa8.26□□□□□ -1.09
CDK13-201ENST00000181839 CUBNO60494 3623 aa8.25□□□□□ -1.09
CDK13-201ENST00000181839 SVEP1Q4LDE5 3571 aa8.23□□□□□ -1.09
CDK13-201ENST00000181839 MUC3AQ02505 3323 aa8.18□□□□□ -1.1
CDK13-201ENST00000181839 LORP23490 312 aaPredicted RBP8.18□□□□□ -1.1
CDK13-201ENST00000181839 MXRA5Q9NR99 2828 aa8.17□□□□□ -1.1
CDK13-201ENST00000181839 KRTAP3-1Q9BYR8 98 aa8.14□□□□□ -1.11
CDK13-201ENST00000181839 KRTAP4-5Q9BYR2 181 aa8.08□□□□□ -1.12
CDK13-201ENST00000181839 CSMD2Q7Z408 3487 aa8.03□□□□□ -1.12
CDK13-201ENST00000181839 KRTAP10-5P60370 271 aa7.99□□□□□ -1.13
CDK13-201ENST00000181839 KRTAP10-6P60371 365 aaPredicted RBP7.97□□□□□ -1.13
CDK13-201ENST00000181839 MEGF8Q7Z7M0 2845 aa7.92□□□□□ -1.14
CDK13-201ENST00000181839 KRTAP8-1Q8IUC2 63 aa7.92□□□□□ -1.14
CDK13-201ENST00000181839 KRTAP12-3P60328 96 aa7.88□□□□□ -1.15
CDK13-201ENST00000181839 TRRAPQ9Y4A5 3859 aa7.87□□□□□ -1.15
CDK13-201ENST00000181839 LCE3AQ5TA76 89 aa7.86□□□□□ -1.15
CDK13-201ENST00000181839 CSMD3Q7Z407 3707 aa7.86□□□□□ -1.15
CDK13-201ENST00000181839 VPS13CQ709C8 3753 aa7.84□□□□□ -1.15
CDK13-201ENST00000181839 COL7A1Q02388 2944 aa7.84□□□□□ -1.15
CDK13-201ENST00000181839 MT1HL1P0DM35 61 aa7.83□□□□□ -1.16
CDK13-201ENST00000181839 ANK3Q12955 4377 aaKnown RBP7.81□□□□□ -1.16
CDK13-201ENST00000181839 INE1O15225 51 aa7.8□□□□□ -1.16
CDK13-201ENST00000181839 FBN1P35555 2871 aaKnown RBP7.73□□□□□ -1.17
CDK13-201ENST00000181839 SRRM2Q9UQ35 2752 aaKnown RBP7.73□□□□□ -1.17
CDK13-201ENST00000181839 HUWE1Q7Z6Z7 4374 aaKnown RBP7.69□□□□□ -1.18
CDK13-201ENST00000181839 FBN3Q75N90 2809 aa7.65□□□□□ -1.18
CDK13-201ENST00000181839 BSNQ9UPA5 3926 aa7.62□□□□□ -1.19
CDK13-201ENST00000181839 ALMS1Q8TCU4 4167 aa7.62□□□□□ -1.19
CDK13-201ENST00000181839 KRTAP3-3Q9BYR6 98 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms