RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 Q5VV11 94 aa11.06□□□□□ -0.64
MBD3-201ENST00000156825 LINC00483Q53H64 154 aa11.06□□□□□ -0.64
MBD3-201ENST00000156825 FBN2P35556 2912 aa11.05□□□□□ -0.64
MBD3-201ENST00000156825 NOTCH2NLQ7Z3S9 236 aa11.04□□□□□ -0.64
MBD3-201ENST00000156825 R4GN34 69 aa11.02□□□□□ -0.65
MBD3-201ENST00000156825 OXTP01178 125 aa11.02□□□□□ -0.65
MBD3-201ENST00000156825 DMAC1Q96GE9 116 aa10.98□□□□□ -0.65
MBD3-201ENST00000156825 SEC61BP60468 96 aaKnown RBP10.98□□□□□ -0.65
MBD3-201ENST00000156825 TENM3Q9P273 2699 aa10.98□□□□□ -0.65
MBD3-201ENST00000156825 ASPMQ8IZT6 3477 aa10.97□□□□□ -0.65
MBD3-201ENST00000156825 KRTAP7-1Q8IUC3 87 aa10.95□□□□□ -0.66
MBD3-201ENST00000156825 LUZP6Q538Z0 58 aa10.94□□□□□ -0.66
MBD3-201ENST00000156825 KRTAP29-1A8MX34 341 aaPredicted RBP10.93□□□□□ -0.66
MBD3-201ENST00000156825 Q6ZRN7 208 aaPredicted RBP10.93□□□□□ -0.66
MBD3-201ENST00000156825 DCHS1Q96JQ0 3298 aa10.92□□□□□ -0.66
MBD3-201ENST00000156825 RELNP78509 3460 aa10.88□□□□□ -0.67
MBD3-201ENST00000156825 M0QZ58 72 aa10.83□□□□□ -0.67
MBD3-201ENST00000156825 HRNRQ86YZ3 2850 aaPredicted RBP10.83□□□□□ -0.68
MBD3-201ENST00000156825 SPATA8Q6RVD6 105 aa10.83□□□□□ -0.68
MBD3-201ENST00000156825 TENM1Q9UKZ4 2725 aa10.81□□□□□ -0.68
MBD3-201ENST00000156825 ZFHX4Q86UP3 3567 aa10.81□□□□□ -0.68
MBD3-201ENST00000156825 LAMA5O15230 3695 aa10.8□□□□□ -0.68
MBD3-201ENST00000156825 RPL37P61927 97 aaKnown RBP10.78□□□□□ -0.68
MBD3-201ENST00000156825 H1FX-AS1Q4G0G2 97 aa10.75□□□□□ -0.69
MBD3-201ENST00000156825 KRTAP13-2Q52LG2 175 aa10.75□□□□□ -0.69
MBD3-201ENST00000156825 ADM2Q7Z4H4 148 aa10.75□□□□□ -0.69
MBD3-201ENST00000156825 PKD1L1Q8TDX9 2849 aa10.75□□□□□ -0.69
MBD3-201ENST00000156825 MUC3AQ02505 3323 aa10.66□□□□□ -0.7
MBD3-201ENST00000156825 KRTAP13-1Q8IUC0 172 aa10.64□□□□□ -0.71
MBD3-201ENST00000156825 DMDP11532 3685 aa10.64□□□□□ -0.71
MBD3-201ENST00000156825 ROMO1P60602 79 aa10.62□□□□□ -0.71
MBD3-201ENST00000156825 CELSR1Q9NYQ6 3014 aa10.62□□□□□ -0.71
MBD3-201ENST00000156825 ASB16-AS1Q495Z4 193 aa10.57□□□□□ -0.72
MBD3-201ENST00000156825 TENM2Q9NT68 2774 aa10.57□□□□□ -0.72
MBD3-201ENST00000156825 MXRA5Q9NR99 2828 aa10.56□□□□□ -0.72
MBD3-201ENST00000156825 A8MU10 97 aa10.55□□□□□ -0.72
MBD3-201ENST00000156825 VWFP04275 2813 aa10.54□□□□□ -0.72
MBD3-201ENST00000156825 PLAC4Q8WY50 150 aa10.47□□□□□ -0.73
MBD3-201ENST00000156825 RPS29P62273 56 aaKnown RBP10.47□□□□□ -0.73
MBD3-201ENST00000156825 CSMD1Q96PZ7 3565 aa10.45□□□□□ -0.74
MBD3-201ENST00000156825 A8MUU9 505 aa10.42□□□□□ -0.74
MBD3-201ENST00000156825 CUBNO60494 3623 aa10.39□□□□□ -0.75
MBD3-201ENST00000156825 H3BS24 57 aa10.36□□□□□ -0.75
MBD3-201ENST00000156825 C20orf166-AS1Q96NR2 134 aa10.36□□□□□ -0.75
MBD3-201ENST00000156825 SMG1Q96Q15 3661 aaKnown RBP10.34□□□□□ -0.75
MBD3-201ENST00000156825 FBN1P35555 2871 aaKnown RBP10.33□□□□□ -0.76
MBD3-201ENST00000156825 SRRM2Q9UQ35 2752 aaKnown RBP10.32□□□□□ -0.76
MBD3-201ENST00000156825 PDZD2O15018 2839 aa10.3□□□□□ -0.76
MBD3-201ENST00000156825 TGP01266 2768 aa10.29□□□□□ -0.76
MBD3-201ENST00000156825 SVEP1Q4LDE5 3571 aa10.28□□□□□ -0.76
MBD3-201ENST00000156825 A0A0A0MQY5 61 aa10.24□□□□□ -0.77
MBD3-201ENST00000156825 KRTAP21-3Q3LHN1 58 aa10.24□□□□□ -0.77
MBD3-201ENST00000156825 KRTAP1-4P0C5Y4 121 aa10.23□□□□□ -0.77
MBD3-201ENST00000156825 A6NN06 94 aa10.2□□□□□ -0.78
MBD3-201ENST00000156825 KRTAP25-1Q3LHN0 102 aa10.13□□□□□ -0.79
MBD3-201ENST00000156825 ZFHX3Q15911 3703 aa10.12□□□□□ -0.79
MBD3-201ENST00000156825 XP32Q5T750 250 aa10.08□□□□□ -0.8
MBD3-201ENST00000156825 NBPF19A0A087WUL8 3843 aa10.06□□□□□ -0.8
MBD3-201ENST00000156825 A0A1B0GVY2 172 aa10.05□□□□□ -0.8
MBD3-201ENST00000156825 CSMD2Q7Z408 3487 aa9.96□□□□□ -0.81
MBD3-201ENST00000156825 OTOGQ6ZRI0 2925 aa9.96□□□□□ -0.82
MBD3-201ENST00000156825 TNP1P09430 55 aa9.91□□□□□ -0.82
MBD3-201ENST00000156825 SPENQ96T58 3664 aaKnown RBP9.89□□□□□ -0.83
MBD3-201ENST00000156825 NDUFAF8A1L188 74 aa9.87□□□□□ -0.83
MBD3-201ENST00000156825 C10orf95Q9H7T3 257 aa9.87□□□□□ -0.83
MBD3-201ENST00000156825 KRTAP16-1A8MUX0 517 aa9.84□□□□□ -0.83
MBD3-201ENST00000156825 KRTAP10-8P60410 259 aa9.84□□□□□ -0.83
MBD3-201ENST00000156825 H0YAA0 97 aa9.78□□□□□ -0.84
MBD3-201ENST00000156825 TPRXLQ17RH7 258 aa9.76□□□□□ -0.85
MBD3-201ENST00000156825 FBN3Q75N90 2809 aa9.74□□□□□ -0.85
MBD3-201ENST00000156825 KRTAP13-3Q3SY46 172 aa9.73□□□□□ -0.85
MBD3-201ENST00000156825 P0C880 135 aa9.71□□□□□ -0.85
MBD3-201ENST00000156825 KRTAP10-10P60014 251 aa9.68□□□□□ -0.86
MBD3-201ENST00000156825 COL7A1Q02388 2944 aa9.66□□□□□ -0.86
MBD3-201ENST00000156825 BSNQ9UPA5 3926 aa9.57□□□□□ -0.88
MBD3-201ENST00000156825 MEGF8Q7Z7M0 2845 aa9.53□□□□□ -0.88
MBD3-201ENST00000156825 TRRAPQ9Y4A5 3859 aa9.45□□□□□ -0.9
MBD3-201ENST00000156825 PP632Q6XCG6 107 aa9.44□□□□□ -0.9
MBD3-201ENST00000156825 KRTAP12-2P59991 146 aa9.25□□□□□ -0.93
MBD3-201ENST00000156825 PRO2289Q9P1D8 64 aa9.25□□□□□ -0.93
MBD3-201ENST00000156825 ANK3Q12955 4377 aaKnown RBP9.22□□□□□ -0.93
MBD3-201ENST00000156825 VPS13CQ709C8 3753 aa9.19□□□□□ -0.94
MBD3-201ENST00000156825 KRTAP3-1Q9BYR8 98 aa9.19□□□□□ -0.94
MBD3-201ENST00000156825 KRTAP12-1P59990 96 aa9.05□□□□□ -0.96
MBD3-201ENST00000156825 CSMD3Q7Z407 3707 aa9□□□□□ -0.97
MBD3-201ENST00000156825 KRTAP13-4Q3LI77 160 aa8.94□□□□□ -0.98
MBD3-201ENST00000156825 MT1HL1P0DM35 61 aa8.86□□□□□ -0.99
MBD3-201ENST00000156825 KRTAP10-6P60371 365 aaPredicted RBP8.85□□□□□ -0.99
MBD3-201ENST00000156825 ZNF469Q96JG9 3925 aaPredicted RBP8.82□□□□□ -1
MBD3-201ENST00000156825 KRTAP4-5Q9BYR2 181 aa8.8□□□□□ -1
MBD3-201ENST00000156825 AKAP9Q99996 3911 aa8.7□□□□□ -1.02
MBD3-201ENST00000156825 HUWE1Q7Z6Z7 4374 aaKnown RBP8.66□□□□□ -1.02
MBD3-201ENST00000156825 KRTAP10-4P60372 401 aaPredicted RBP8.61□□□□□ -1.03
MBD3-201ENST00000156825 KRTAP15-1Q3LI76 137 aa8.6□□□□□ -1.03
MBD3-201ENST00000156825 KRTAP3-3Q9BYR6 98 aa8.58□□□□□ -1.04
MBD3-201ENST00000156825 KRTAP3-2Q9BYR7 98 aa8.55□□□□□ -1.04
MBD3-201ENST00000156825 CRCT1Q9UGL9 99 aa8.33□□□□□ -1.08
MBD3-201ENST00000156825 DNAH5Q8TE73 4624 aa8.32□□□□□ -1.08
MBD3-201ENST00000156825 DNHD1Q96M86 4753 aa8.31□□□□□ -1.08
MBD3-201ENST00000156825 KRTAP10-12P60413 245 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms