RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 VPS13DQ5THJ4 4388 aa4.9□□□□□ -1.62
CDC27-201ENST00000066544 IGLV7-43P04211 117 aa4.9□□□□□ -1.62
CDC27-201ENST00000066544 Q8N9P0 234 aaPredicted RBP4.9□□□□□ -1.63
CDC27-201ENST00000066544 KRTAP10-2P60368 255 aa4.89□□□□□ -1.63
CDC27-201ENST00000066544 C1orf195Q5TG92 126 aa4.89□□□□□ -1.63
CDC27-201ENST00000066544 SPAG11AQ6PDA7 123 aa4.89□□□□□ -1.63
CDC27-201ENST00000066544 DNHD1Q96M86 4753 aa4.89□□□□□ -1.63
CDC27-201ENST00000066544 TP53AIP1Q9HCN2 124 aa4.89□□□□□ -1.63
CDC27-201ENST00000066544 Q5W150 140 aa4.88□□□□□ -1.63
CDC27-201ENST00000066544 Q5VV11 94 aa4.88□□□□□ -1.63
CDC27-201ENST00000066544 DNAH2Q9P225 4427 aa4.88□□□□□ -1.63
CDC27-201ENST00000066544 IGLV7-46A0A075B6I9 117 aa4.87□□□□□ -1.63
CDC27-201ENST00000066544 DYNC2H1Q8NCM8 4307 aaKnown RBP4.87□□□□□ -1.63
CDC27-201ENST00000066544 DNAH17Q9UFH2 4485 aa4.86□□□□□ -1.63
CDC27-201ENST00000066544 HECTD4Q9Y4D8 3996 aa4.86□□□□□ -1.63
CDC27-201ENST00000066544 ASB16-AS1Q495Z4 193 aa4.86□□□□□ -1.63
CDC27-201ENST00000066544 SPTSSBQ8NFR3 76 aa4.86□□□□□ -1.63
CDC27-201ENST00000066544 V9GYY9 64 aa4.86□□□□□ -1.63
CDC27-201ENST00000066544 DNAH11Q96DT5 4516 aa4.86□□□□□ -1.63
CDC27-201ENST00000066544 A6NED7 52 aa4.85□□□□□ -1.63
CDC27-201ENST00000066544 PRR26Q8N8Z3 221 aa4.84□□□□□ -1.63
CDC27-201ENST00000066544 LIMD2Q9BT23 127 aa4.84□□□□□ -1.64
CDC27-201ENST00000066544 HRES1P13985 223 aa4.83□□□□□ -1.64
CDC27-201ENST00000066544 DNAH6Q9C0G6 4158 aa4.82□□□□□ -1.64
CDC27-201ENST00000066544 KRTAP10-1P60331 282 aa4.82□□□□□ -1.64
CDC27-201ENST00000066544 PMAIP1Q13794 54 aa4.8□□□□□ -1.64
CDC27-201ENST00000066544 KRTAP13-2Q52LG2 175 aa4.8□□□□□ -1.64
CDC27-201ENST00000066544 SSBP3-AS1Q7Z2R9 100 aa4.8□□□□□ -1.64
CDC27-201ENST00000066544 LINC00313P59037 77 aa4.8□□□□□ -1.64
CDC27-201ENST00000066544 LOC101927531A0A1B0GV80 90 aa4.79□□□□□ -1.64
CDC27-201ENST00000066544 LRP1BQ9NZR2 4599 aa4.78□□□□□ -1.64
CDC27-201ENST00000066544 LCA10Q71F78 164 aa4.78□□□□□ -1.64
CDC27-201ENST00000066544 IGKV2D-30A0A075B6S6 120 aa4.77□□□□□ -1.65
CDC27-201ENST00000066544 IGKV2-30P06310 120 aa4.77□□□□□ -1.65
CDC27-201ENST00000066544 SPINK7P58062 85 aa4.76□□□□□ -1.65
CDC27-201ENST00000066544 DNAH5Q8TE73 4624 aa4.75□□□□□ -1.65
CDC27-201ENST00000066544 Q75L30 129 aa4.75□□□□□ -1.65
CDC27-201ENST00000066544 PLA2G1BP04054 148 aaKnown RBP4.75□□□□□ -1.65
CDC27-201ENST00000066544 KRTAP13-3Q3SY46 172 aa4.75□□□□□ -1.65
CDC27-201ENST00000066544 C8orf87E5RJ46 101 aa4.74□□□□□ -1.65
CDC27-201ENST00000066544 C4orf48Q5BLP8 95 aa4.74□□□□□ -1.65
CDC27-201ENST00000066544 LINC01558Q9Y6Z2 57 aa4.74□□□□□ -1.65
CDC27-201ENST00000066544 HYDINQ4G0P3 5121 aa4.73□□□□□ -1.65
CDC27-201ENST00000066544 FAM229AH3BQW9 127 aa4.73□□□□□ -1.65
CDC27-201ENST00000066544 SMR3BP02814 79 aaPredicted RBP4.73□□□□□ -1.65
CDC27-201ENST00000066544 ACYP2P14621 99 aa4.72□□□□□ -1.65
CDC27-201ENST00000066544 TYMSOSQ8TAI1 123 aa4.72□□□□□ -1.65
CDC27-201ENST00000066544 KRTAP1-4P0C5Y4 121 aa4.71□□□□□ -1.66
CDC27-201ENST00000066544 ALMS1Q8TCU4 4167 aa4.7□□□□□ -1.66
CDC27-201ENST00000066544 Q6ZSA8 131 aa4.7□□□□□ -1.66
CDC27-201ENST00000066544 SPINK1P00995 79 aa4.69□□□□□ -1.66
CDC27-201ENST00000066544 CDC42SE1Q9NRR8 79 aa4.68□□□□□ -1.66
CDC27-201ENST00000066544 ATP11AUNQ6ZP68 121 aa4.67□□□□□ -1.66
CDC27-201ENST00000066544 KRTAP16-1A8MUX0 517 aa4.67□□□□□ -1.66
CDC27-201ENST00000066544 DMAC1Q96GE9 116 aa4.67□□□□□ -1.66
CDC27-201ENST00000066544 Q8N1X5 172 aa4.66□□□□□ -1.66
CDC27-201ENST00000066544 C7orf65Q6ZTY9 151 aa4.66□□□□□ -1.66
CDC27-201ENST00000066544 VPS13BQ7Z7G8 4022 aa4.65□□□□□ -1.66
CDC27-201ENST00000066544 SEC61GP60059 68 aa4.65□□□□□ -1.66
CDC27-201ENST00000066544 A0A1B0GU69 56 aa4.65□□□□□ -1.67
CDC27-201ENST00000066544 C9orf92A6NGG3 77 aa4.65□□□□□ -1.67
CDC27-201ENST00000066544 DMBT1Q9UGM3 2413 aaPredicted RBP4.63□□□□□ -1.67
CDC27-201ENST00000066544 LINC00304Q8N9R0 145 aa4.63□□□□□ -1.67
CDC27-201ENST00000066544 FAT1Q14517 4588 aa4.62□□□□□ -1.67
CDC27-201ENST00000066544 PKHD1P08F94 4074 aa4.62□□□□□ -1.67
CDC27-201ENST00000066544 A6NN06 94 aa4.61□□□□□ -1.67
CDC27-201ENST00000066544 FAT2Q9NYQ8 4349 aa4.61□□□□□ -1.67
CDC27-201ENST00000066544 PKD1P98161 4303 aa4.61□□□□□ -1.67
CDC27-201ENST00000066544 KTN1-AS1Q86SY8 53 aa4.61□□□□□ -1.67
CDC27-201ENST00000066544 FLG2Q5D862 2391 aaPredicted RBP4.6□□□□□ -1.67
CDC27-201ENST00000066544 PRAC1Q96KF2 57 aa4.56□□□□□ -1.68
CDC27-201ENST00000066544 DYNC1H1Q14204 4646 aaKnown RBP4.56□□□□□ -1.68
CDC27-201ENST00000066544 RBM12B-AS1Q9P1G2 102 aa4.55□□□□□ -1.68
CDC27-201ENST00000066544 ADM2Q7Z4H4 148 aa4.55□□□□□ -1.68
CDC27-201ENST00000066544 MIR22HGQ0VDD5 57 aa4.54□□□□□ -1.68
CDC27-201ENST00000066544 UQCR11O14957 56 aa4.54□□□□□ -1.68
CDC27-201ENST00000066544 SACSQ9NZJ4 4579 aa4.51□□□□□ -1.69
CDC27-201ENST00000066544 SPATA8Q6RVD6 105 aa4.49□□□□□ -1.69
CDC27-201ENST00000066544 A8MUU9 505 aa4.45□□□□□ -1.7
CDC27-201ENST00000066544 KRTAP3-1Q9BYR8 98 aa4.45□□□□□ -1.7
CDC27-201ENST00000066544 LRP1Q07954 4544 aaKnown RBP4.44□□□□□ -1.7
CDC27-201ENST00000066544 KRTAP10-4P60372 401 aaPredicted RBP4.44□□□□□ -1.7
CDC27-201ENST00000066544 C20orf166-AS1Q96NR2 134 aa4.44□□□□□ -1.7
CDC27-201ENST00000066544 RPS29P62273 56 aaKnown RBP4.43□□□□□ -1.7
CDC27-201ENST00000066544 MYCBP2O75592 4640 aa4.43□□□□□ -1.7
CDC27-201ENST00000066544 APOBP04114 4563 aaKnown RBP4.43□□□□□ -1.7
CDC27-201ENST00000066544 A0A1B0GVY2 172 aa4.43□□□□□ -1.7
CDC27-201ENST00000066544 KMT2CQ8NEZ4 4911 aaKnown RBP4.42□□□□□ -1.7
CDC27-201ENST00000066544 H0YAA0 97 aa4.39□□□□□ -1.71
CDC27-201ENST00000066544 A0A1B0GU33 70 aa4.39□□□□□ -1.71
CDC27-201ENST00000066544 CSAG1Q6PB30 78 aa4.38□□□□□ -1.71
CDC27-201ENST00000066544 RYR2Q92736 4967 aa4.36□□□□□ -1.71
CDC27-201ENST00000066544 COX6B2Q6YFQ2 88 aa4.36□□□□□ -1.71
CDC27-201ENST00000066544 Q5VSD8 79 aa4.34□□□□□ -1.71
CDC27-201ENST00000066544 H1FX-AS1Q4G0G2 97 aa4.34□□□□□ -1.71
CDC27-201ENST00000066544 CRIPTQ9P021 101 aa4.34□□□□□ -1.71
CDC27-201ENST00000066544 KRTAP21-3Q3LHN1 58 aa4.33□□□□□ -1.72
CDC27-201ENST00000066544 KIAA1109Q2LD37 5005 aa4.32□□□□□ -1.72
CDC27-201ENST00000066544 PKHD1L1Q86WI1 4243 aa4.31□□□□□ -1.72
CDC27-201ENST00000066544 A0A0D9SG42 100 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms