RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Tm4sf19E9Q9H8 206 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 Gm2564F6Z9S8 108 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 Ccl19O70460 108 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 H1fxQ80ZM5 188 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 Defb30Q30KN4 75 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 8030423J24RikQ9CX45 142 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 HampQ9EQ21 83 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 Cbln3Q9JHG0 197 aa9.77□□□□□ -0.84
Trim56-201ENSMUST00000054384 Cxcl13O55038 109 aa9.77□□□□□ -0.85
Trim56-201ENSMUST00000054384 Tmem256Q5F285 113 aa9.77□□□□□ -0.85
Trim56-201ENSMUST00000054384 Igfbpl1Q80W15 270 aa9.77□□□□□ -0.85
Trim56-201ENSMUST00000054384 Igkv4-59A0A0B4J1I8 117 aa9.77□□□□□ -0.85
Trim56-201ENSMUST00000054384 Pax1P09084 446 aa9.77□□□□□ -0.85
Trim56-201ENSMUST00000054384 Jmjd1cQ69ZK6 2350 aa9.77□□□□□ -0.85
Trim56-201ENSMUST00000054384 Ighv5-12-4A0A0A6YWG4 117 aa9.77□□□□□ -0.85
Trim56-201ENSMUST00000054384 Gm20219A0A1B0GRQ3 87 aa9.77□□□□□ -0.85
Trim56-201ENSMUST00000054384 Tex26Q0VB26 296 aa9.77□□□□□ -0.85
Trim56-201ENSMUST00000054384 Znf260Q62513 407 aa9.77□□□□□ -0.85
Trim56-201ENSMUST00000054384 Ly86O88188 162 aa9.76□□□□□ -0.85
Trim56-201ENSMUST00000054384 Q8BTC1 67 aa9.76□□□□□ -0.85
Trim56-201ENSMUST00000054384 VsirQ9D659 308 aa9.76□□□□□ -0.85
Trim56-201ENSMUST00000054384 Igkv4-54A0A0G2JES9 117 aa9.76□□□□□ -0.85
Trim56-201ENSMUST00000054384 Iglc2P01844 104 aa9.76□□□□□ -0.85
Trim56-201ENSMUST00000054384 Ccl6P27784 116 aa9.76□□□□□ -0.85
Trim56-201ENSMUST00000054384 Lypd1Q8BLC3 141 aa9.76□□□□□ -0.85
Trim56-201ENSMUST00000054384 Gm10306Q9CUK2 115 aa9.76□□□□□ -0.85
Trim56-201ENSMUST00000054384 Ighv1-81A0A075B5Y4 117 aa9.76□□□□□ -0.85
Trim56-201ENSMUST00000054384 Foxh1O88621 401 aa9.76□□□□□ -0.85
Trim56-201ENSMUST00000054384 Supt4h1aP63271 117 aa9.76□□□□□ -0.85
Trim56-201ENSMUST00000054384 Tmem92B7ZWI3 162 aa9.76□□□□□ -0.85
Trim56-201ENSMUST00000054384 Rpl32-psP17932 135 aa9.76□□□□□ -0.85
Trim56-201ENSMUST00000054384 Polr3kQ9CQZ7 108 aa9.76□□□□□ -0.85
Trim56-201ENSMUST00000054384 Usf3B2RUQ2 2221 aa9.76□□□□□ -0.85
Trim56-201ENSMUST00000054384 H2al1jA2BFR3 109 aa9.76□□□□□ -0.85
Trim56-201ENSMUST00000054384 Sslp1Q3UN54 99 aa9.76□□□□□ -0.85
Trim56-201ENSMUST00000054384 BmperQ8CJ69 685 aa9.76□□□□□ -0.85
Trim56-201ENSMUST00000054384 Reg3dQ9QUS9 175 aa9.76□□□□□ -0.85
Trim56-201ENSMUST00000054384 1110002E22RikE0CYV9 1786 aa9.75□□□□□ -0.85
Trim56-201ENSMUST00000054384 Ighv8-6A0A0A6YXA3 118 aa9.75□□□□□ -0.85
Trim56-201ENSMUST00000054384 E130218I03RikA0A0U1RNU5 63 aa9.75□□□□□ -0.85
Trim56-201ENSMUST00000054384 Igkv6-23A0A140T8N5 115 aa9.75□□□□□ -0.85
Trim56-201ENSMUST00000054384 Pde6hP61249 83 aa9.75□□□□□ -0.85
Trim56-201ENSMUST00000054384 Trav7-1A0A0G2JEV5 112 aa9.75□□□□□ -0.85
Trim56-201ENSMUST00000054384 Trbv12-1A0A0B4J1H0 124 aa9.75□□□□□ -0.85
Trim56-201ENSMUST00000054384 PcolceQ61398 468 aa9.75□□□□□ -0.85
Trim56-201ENSMUST00000054384 Q8R092 253 aa9.75□□□□□ -0.85
Trim56-201ENSMUST00000054384 Prss22Q9ER10 306 aa9.75□□□□□ -0.85
Trim56-201ENSMUST00000054384 Gm15093A2BI72 449 aa9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 Gm15097E9QA14 449 aa9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 Pax9P47242 342 aa9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 Rnf183Q8QZS5 190 aa9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 Nup210Q9QY81 1886 aaKnown RBP9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 Gm10203F6QJ09 66 aa9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 B230307C23RikQ8BLB2 64 aa9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 Igkv3-9A0A140T8P4 119 aa9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 Mrps21P58059 87 aa9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 Chchd5Q9CQP3 110 aa9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 Fam216aQ9DB54 251 aa9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 Ighv1-18A0A0A6YXN4 117 aa9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 Eid2bE9Q2Y0 151 aa9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 Gm2174F6ZVF2 133 aa9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 Foxf2O54743 446 aa9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 SeboxP70368 190 aa9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 Fam240bJ3QMB3 78 aa9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 BC048502Q80Y74 154 aa9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 Crlf1Q9JM58 425 aa9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 P01802 115 aa9.74□□□□□ -0.85
Trim56-201ENSMUST00000054384 Ighv1-80A0A075B5Y3 117 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 Ca1P13634 261 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 Mpv17l2Q8VIK2 200 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 Pip4p2Q9CZX7 257 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 Ubl5Q9EPV8 73 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 Gm20481G3UXK4 153 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 P01680 129 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 LtbP41155 306 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 Ighv1-31A0A0A6YWK5 117 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 Ccl3P10855 92 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 Ndufa3Q9CQ91 84 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 Pnrc2Q9CR73 140 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 Trbv12-2A0A0B4J1H1 124 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 Dennd4cA6H8H2 1906 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 Ighv1-62-3P01754 117 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 Znf740Q6NZQ6 180 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 Dscaml1Q4VA61 2053 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 Trav9-1A0A075B601 112 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 Gatd1Q8BFQ8 220 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 Igkv4-80A0A075B5L7 116 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 Igkv4-69A0A0B4J1I6 116 aa9.73□□□□□ -0.85
Trim56-201ENSMUST00000054384 Fxyd7P59648 80 aa9.72□□□□□ -0.85
Trim56-201ENSMUST00000054384 4931422A03RikA2BHN9 113 aa9.72□□□□□ -0.85
Trim56-201ENSMUST00000054384 P01638 115 aa9.72□□□□□ -0.85
Trim56-201ENSMUST00000054384 Oxld1Q9CR10 201 aa9.72□□□□□ -0.85
Trim56-201ENSMUST00000054384 Zfp36l2P23949 484 aaKnown RBP9.72□□□□□ -0.85
Trim56-201ENSMUST00000054384 Ang6Q5GAN0 147 aa9.72□□□□□ -0.85
Trim56-201ENSMUST00000054384 Ube2e2Q91W82 201 aa9.72□□□□□ -0.85
Trim56-201ENSMUST00000054384 Defa21Q8C1P2 93 aa9.72□□□□□ -0.85
Trim56-201ENSMUST00000054384 SelenokQ9JLJ1 94 aa9.72□□□□□ -0.85
Trim56-201ENSMUST00000054384 Gm10912Q3UXH0 145 aa9.72□□□□□ -0.85
Trim56-201ENSMUST00000054384 Wisp1O54775 367 aa9.71□□□□□ -0.85
Trim56-201ENSMUST00000054384 PkigO70139 76 aa9.71□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms