RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Plscr4P58196 326 aa14.26□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Itpr1P11881 2749 aa14.26□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 SonQ9QX47 2444 aaKnown RBP14.25□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Pde6hP61249 83 aa14.25□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 RhogP84096 191 aa14.25□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Tcf15Q60756 195 aa14.25□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Mrpl33Q9CQP0 65 aa14.25□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 A0A1Y7VMQ4 148 aa14.25□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Trav14n-2A0A0G2JDF5 121 aa14.24□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Trdv2-2Q5R1A4 116 aa14.24□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Olfr981Q8VEU2 310 aa14.24□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Klk10Q99M20 278 aa14.24□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Rchy1Q9CR50 261 aa14.24□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 EsdQ9R0P3 282 aa14.24□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Ighv8-4A0A0A6YW26 117 aa14.24□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Omt2bD3YX29 119 aa14.24□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 SstP60041 116 aa14.24□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Hnrnpa3Q8BG05 379 aaKnown RBP14.24□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Vmn1r62Q8R2C0 300 aa14.24□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Cspg4Q8VHY0 2327 aa14.23□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Brs3O54798 399 aa14.23□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Gp9O88186 177 aa14.23□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Borcs7Q9CRC6 105 aa14.23□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Vmn1r63Q9EPT1 300 aa14.23□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Ighv1-16A0A075B5U1 98 aa14.23□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Gm17359A0A0G2JEB7 487 aa14.23□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Trbv14A0A140T8L9 115 aa14.23□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Tmem88bQ3TYP4 173 aa14.23□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Vwc2lQ505H4 222 aa14.23□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Olfr149Q60888 311 aa14.23□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Dopey2Q3UHQ6 2295 aa14.23□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Zfp109A0A0U1RPC5 652 aa14.22□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Spint3Q3UW09 88 aa14.22□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Zfp92Q62396 488 aa14.22□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Znf787Q8BIF9 381 aa14.22□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Cphx2Q8BX39 182 aa14.22□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Trpt1Q8K3A2 249 aa14.22□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Gm5157A0A087WRH8 301 aa14.22□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Ighv6-7A0A0A6YWU3 119 aa14.22□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Gm765B2RVL9 189 aa14.22□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Amn1B8JKV0 258 aa14.22□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Defa35E9QLQ1 93 aa14.22□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Cacng7P62956 275 aa14.22□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 FshbQ60687 130 aa14.22□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 F930015N05RikQ8C3A3 210 aa14.22□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Atp6v0e1Q9CQD8 81 aa14.22□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 CrygbP04344 175 aa14.21□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Mc5rP41149 325 aa14.21□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Klk15Q8CGR4 254 aa14.21□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Tmem219Q9D123 240 aa14.21□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Cml3Q9JIY8 226 aa14.21□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Cend1Q9JKC6 149 aa14.21□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Ighv1-62-2A0A0A6YXZ4 119 aa14.21□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Ighv9-1A0A0B4J1P3 117 aa14.21□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 BC107364E9Q5A2 140 aa14.21□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Gm9970F6ZED4 185 aa14.21□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 P0C913 63 aa14.21□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Zfand3Q497H0 227 aa14.21□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Stxbp6Q8R3T5 210 aa14.21□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Ube2l6Q9QZU9 153 aa14.21□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Lrrk2Q5S006 2527 aa14.21□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Ighv1-77A0A0G2JGS9 117 aa14.2□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Rnf185Q91YT2 192 aa14.2□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Gm33815A0A087WNV3 176 aa14.2□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Gm29644A0A087WPG2 191 aa14.2□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Ighv1-20A0A0A6YX66 117 aa14.2□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Trav7-5A0A0G2JFX6 112 aa14.2□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Tmem29A2ANF5 204 aa14.2□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 QrfpQ8CE23 124 aa14.2□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Olfr1431Q8VF59 312 aa14.2□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Parm1Q923D3 296 aa14.2□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Hcfc1Q61191 2045 aaKnown RBP14.19□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Ighv8-8A0A0A6YXQ0 119 aa14.19□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Esp38A8R0X1 80 aa14.19□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 PdpnQ62011 172 aa14.19□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Lypd1Q8BLC3 141 aa14.19□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Olfr1367Q8VFG2 316 aa14.19□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Pla2g2dQ9WVF6 144 aa14.19□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Col6a4A2AX52 2309 aa14.19□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 CrxO54751 299 aa14.19□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 TbpP29037 316 aa14.19□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Tdgf1P51865 171 aa14.19□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Defb30Q30KN4 75 aa14.19□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Defa26Q3L180 93 aa14.19□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Olfr873Q8VFJ0 319 aa14.19□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Sptan1P16546 2472 aaKnown RBP14.18□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Gm6525A0A0A6YW33 106 aa14.18□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 1520401A03RikA0A0J9YVH6 598 aa14.18□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Rbx1P62878 108 aa14.18□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Tomm6Q9CQN3 74 aa14.18□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Igkv4-90A0A075B5L3 117 aa14.18□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Rbfox3Q8BIF2 374 aa14.18□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Tctex1d2Q9CQ66 144 aa14.18□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Wfdc15bQ9JHY4 80 aa14.18□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Emp2O88662 172 aa14.18□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 P01756 117 aa14.18□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 P01757 117 aa14.18□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Tnfrsf9P20334 256 aa14.18□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Minos1Q7TNS2 76 aa14.18□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Trav21-dv12A0A075B6C4 109 aa14.17□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 56.8 ms