Protein–RNA interactions for Protein: Q8BX39

Cphx2, Cytoplasmic polyadenylated homeobox, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cphx2Q8BX39 Gm25239-201ENSMUST00000174915 86 ntBASIC25.92■■□□□ 1.74
Cphx2Q8BX39 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cphx2Q8BX39 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cphx2Q8BX39 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Cphx2Q8BX39 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cphx2Q8BX39 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cphx2Q8BX39 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Cphx2Q8BX39 Psd-208ENSMUST00000224556 2034 ntBASIC23.62■■□□□ 1.37
Cphx2Q8BX39 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cphx2Q8BX39 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cphx2Q8BX39 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Cphx2Q8BX39 Gm15042-201ENSMUST00000120212 883 ntBASIC22.96■■□□□ 1.27
Cphx2Q8BX39 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cphx2Q8BX39 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cphx2Q8BX39 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cphx2Q8BX39 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cphx2Q8BX39 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cphx2Q8BX39 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.54■■□□□ 1.2
Cphx2Q8BX39 Gm15045-201ENSMUST00000117359 883 ntBASIC22.47■■□□□ 1.19
Cphx2Q8BX39 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cphx2Q8BX39 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cphx2Q8BX39 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cphx2Q8BX39 Gm24109-201ENSMUST00000175489 103 ntBASIC22.29■■□□□ 1.16
Cphx2Q8BX39 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cphx2Q8BX39 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cphx2Q8BX39 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cphx2Q8BX39 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Cphx2Q8BX39 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cphx2Q8BX39 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Cphx2Q8BX39 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cphx2Q8BX39 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cphx2Q8BX39 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.9■■□□□ 1.1
Cphx2Q8BX39 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cphx2Q8BX39 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cphx2Q8BX39 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cphx2Q8BX39 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cphx2Q8BX39 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cphx2Q8BX39 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cphx2Q8BX39 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.8■■□□□ 1.08
Cphx2Q8BX39 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cphx2Q8BX39 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cphx2Q8BX39 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cphx2Q8BX39 Gm23366-201ENSMUST00000175022 89 ntBASIC21.72■■□□□ 1.07
Cphx2Q8BX39 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.71■■□□□ 1.07
Cphx2Q8BX39 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Cphx2Q8BX39 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.63■■□□□ 1.05
Cphx2Q8BX39 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cphx2Q8BX39 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cphx2Q8BX39 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cphx2Q8BX39 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cphx2Q8BX39 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.52■■□□□ 1.03
Cphx2Q8BX39 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Cphx2Q8BX39 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cphx2Q8BX39 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.47■■□□□ 1.03
Cphx2Q8BX39 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cphx2Q8BX39 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cphx2Q8BX39 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cphx2Q8BX39 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Cphx2Q8BX39 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cphx2Q8BX39 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cphx2Q8BX39 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Cphx2Q8BX39 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cphx2Q8BX39 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Cphx2Q8BX39 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cphx2Q8BX39 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cphx2Q8BX39 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Cphx2Q8BX39 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.12■□□□□ 0.97
Cphx2Q8BX39 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.11■□□□□ 0.97
Cphx2Q8BX39 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cphx2Q8BX39 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cphx2Q8BX39 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cphx2Q8BX39 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Cphx2Q8BX39 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cphx2Q8BX39 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cphx2Q8BX39 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cphx2Q8BX39 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cphx2Q8BX39 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.85■□□□□ 0.93
Cphx2Q8BX39 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cphx2Q8BX39 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.83■□□□□ 0.92
Cphx2Q8BX39 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cphx2Q8BX39 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cphx2Q8BX39 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.75■□□□□ 0.91
Cphx2Q8BX39 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cphx2Q8BX39 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cphx2Q8BX39 Zxda-201ENSMUST00000117281 2621 ntBASIC20.65■□□□□ 0.9
Cphx2Q8BX39 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cphx2Q8BX39 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.64■□□□□ 0.89
Cphx2Q8BX39 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cphx2Q8BX39 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cphx2Q8BX39 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cphx2Q8BX39 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cphx2Q8BX39 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cphx2Q8BX39 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cphx2Q8BX39 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cphx2Q8BX39 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cphx2Q8BX39 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cphx2Q8BX39 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cphx2Q8BX39 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cphx2Q8BX39 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cphx2Q8BX39 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms