RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 Q5VSD8 79 aa9.53□□□□□ -0.88
TNXB-208ENST00000611016 CYSTM1Q9H1C7 97 aa9.53□□□□□ -0.88
TNXB-208ENST00000611016 CAMK2N1Q7Z7J9 78 aa9.53□□□□□ -0.88
TNXB-208ENST00000611016 RANBP2P49792 3224 aaKnown RBP9.53□□□□□ -0.88
TNXB-208ENST00000611016 LCE6AA0A183 80 aa9.52□□□□□ -0.88
TNXB-208ENST00000611016 HTTP42858 3142 aa9.52□□□□□ -0.89
TNXB-208ENST00000611016 FP248Q71RG6 208 aaPredicted RBP9.51□□□□□ -0.89
TNXB-208ENST00000611016 LINC00472Q9H8W2 130 aa9.5□□□□□ -0.89
TNXB-208ENST00000611016 S4R3F8 94 aa9.5□□□□□ -0.89
TNXB-208ENST00000611016 KRTAP10-1P60331 282 aa9.49□□□□□ -0.89
TNXB-208ENST00000611016 KRTAP10-2P60368 255 aa9.48□□□□□ -0.89
TNXB-208ENST00000611016 MGAQ8IWI9 3026 aa9.47□□□□□ -0.89
TNXB-208ENST00000611016 Q8N9P0 234 aaPredicted RBP9.47□□□□□ -0.89
TNXB-208ENST00000611016 TEP1Q99973 2627 aaKnown RBP9.46□□□□□ -0.89
TNXB-208ENST00000611016 Q5W150 140 aa9.46□□□□□ -0.9
TNXB-208ENST00000611016 TEX15Q9BXT5 2789 aa9.46□□□□□ -0.9
TNXB-208ENST00000611016 STAB1Q9NY15 2570 aa9.46□□□□□ -0.9
TNXB-208ENST00000611016 KRTAP26-1Q6PEX3 210 aa9.43□□□□□ -0.9
TNXB-208ENST00000611016 SEC61BP60468 96 aaKnown RBP9.42□□□□□ -0.9
TNXB-208ENST00000611016 LAMA3Q16787 3333 aa9.41□□□□□ -0.9
TNXB-208ENST00000611016 AKAP13Q12802 2813 aa9.41□□□□□ -0.9
TNXB-208ENST00000611016 CHD6Q8TD26 2715 aa9.41□□□□□ -0.9
TNXB-208ENST00000611016 CFAP54Q96N23 3096 aa9.4□□□□□ -0.9
TNXB-208ENST00000611016 ZNF292O60281 2723 aa9.39□□□□□ -0.91
TNXB-208ENST00000611016 MKI67P46013 3256 aaKnown RBP9.38□□□□□ -0.91
TNXB-208ENST00000611016 SPINK7P58062 85 aa9.38□□□□□ -0.91
TNXB-208ENST00000611016 SETXQ7Z333 2677 aaKnown RBP9.37□□□□□ -0.91
TNXB-208ENST00000611016 TRANK1O15050 2925 aa9.36□□□□□ -0.91
TNXB-208ENST00000611016 OXTP01178 125 aa9.36□□□□□ -0.91
TNXB-208ENST00000611016 Q5VV11 94 aa9.35□□□□□ -0.91
TNXB-208ENST00000611016 COL6A5A8TX70 2615 aa9.31□□□□□ -0.92
TNXB-208ENST00000611016 PANO1I0J062 215 aa9.3□□□□□ -0.92
TNXB-208ENST00000611016 BRCA2P51587 3418 aa9.28□□□□□ -0.92
TNXB-208ENST00000611016 R4GN34 69 aa9.28□□□□□ -0.92
TNXB-208ENST00000611016 WDFY4Q6ZS81 3184 aa9.27□□□□□ -0.93
TNXB-208ENST00000611016 Q6ZR54 194 aa9.27□□□□□ -0.93
TNXB-208ENST00000611016 NBEAL1Q6ZS30 2694 aa9.25□□□□□ -0.93
TNXB-208ENST00000611016 ASB16-AS1Q495Z4 193 aa9.24□□□□□ -0.93
TNXB-208ENST00000611016 BAHCC1Q9P281 2608 aa9.24□□□□□ -0.93
TNXB-208ENST00000611016 RPL37P61927 97 aaKnown RBP9.23□□□□□ -0.93
TNXB-208ENST00000611016 PRUNE2Q8WUY3 3088 aa9.22□□□□□ -0.93
TNXB-208ENST00000611016 KRTAP4-16G5E9R7 235 aaPredicted RBP9.21□□□□□ -0.93
TNXB-208ENST00000611016 UNC79Q9P2D8 2635 aa9.21□□□□□ -0.94
TNXB-208ENST00000611016 DSPP15924 2871 aaKnown RBP9.21□□□□□ -0.94
TNXB-208ENST00000611016 H3BS24 57 aa9.19□□□□□ -0.94
TNXB-208ENST00000611016 IGSF10Q6WRI0 2623 aa9.19□□□□□ -0.94
TNXB-208ENST00000611016 ROMO1P60602 79 aa9.19□□□□□ -0.94
TNXB-208ENST00000611016 A0A0C4DFX4 3053 aa9.19□□□□□ -0.94
TNXB-208ENST00000611016 H1FX-AS1Q4G0G2 97 aa9.18□□□□□ -0.94
TNXB-208ENST00000611016 GCN1Q92616 2671 aaKnown RBP9.18□□□□□ -0.94
TNXB-208ENST00000611016 A0A0A0MQY5 61 aa9.18□□□□□ -0.94
TNXB-208ENST00000611016 PRAC1Q96KF2 57 aa9.18□□□□□ -0.94
TNXB-208ENST00000611016 LAMA2P24043 3122 aaKnown RBP9.18□□□□□ -0.94
TNXB-208ENST00000611016 RPS29P62273 56 aaKnown RBP9.17□□□□□ -0.94
TNXB-208ENST00000611016 A0A087X002 238 aa9.16□□□□□ -0.94
TNXB-208ENST00000611016 NOTCH1P46531 2555 aa9.16□□□□□ -0.94
TNXB-208ENST00000611016 KRTAP29-1A8MX34 341 aaPredicted RBP9.15□□□□□ -0.95
TNXB-208ENST00000611016 TRIOO75962 3097 aa9.11□□□□□ -0.95
TNXB-208ENST00000611016 XIRP2A4UGR9 3374 aa9.11□□□□□ -0.95
TNXB-208ENST00000611016 M0QZ58 72 aa9.08□□□□□ -0.96
TNXB-208ENST00000611016 UNC80Q8N2C7 3258 aa9.07□□□□□ -0.96
TNXB-208ENST00000611016 NBEAL2Q6ZNJ1 2754 aa9.05□□□□□ -0.96
TNXB-208ENST00000611016 FLG2Q5D862 2391 aaPredicted RBP9.05□□□□□ -0.96
TNXB-208ENST00000611016 MAP1AP78559 2803 aaPredicted RBP9.04□□□□□ -0.96
TNXB-208ENST00000611016 Q6ZRN7 208 aaPredicted RBP9.04□□□□□ -0.96
TNXB-208ENST00000611016 KRTAP11-1Q8IUC1 163 aa9.03□□□□□ -0.96
TNXB-208ENST00000611016 UBR5O95071 2799 aaPredicted RBP9.02□□□□□ -0.97
TNXB-208ENST00000611016 PLAC4Q8WY50 150 aa9.01□□□□□ -0.97
TNXB-208ENST00000611016 ADM2Q7Z4H4 148 aa9.01□□□□□ -0.97
TNXB-208ENST00000611016 FRYQ5TBA9 3013 aa8.99□□□□□ -0.97
TNXB-208ENST00000611016 ITPR2Q14571 2701 aa8.99□□□□□ -0.97
TNXB-208ENST00000611016 NOTCH2NLQ7Z3S9 236 aa8.97□□□□□ -0.97
TNXB-208ENST00000611016 CDH23Q9H251 3354 aa8.97□□□□□ -0.97
TNXB-208ENST00000611016 VPS13AQ96RL7 3174 aa8.97□□□□□ -0.97
TNXB-208ENST00000611016 SPATA8Q6RVD6 105 aa8.96□□□□□ -0.98
TNXB-208ENST00000611016 KRTAP7-1Q8IUC3 87 aa8.9□□□□□ -0.98
TNXB-208ENST00000611016 DMBT1Q9UGM3 2413 aaPredicted RBP8.9□□□□□ -0.99
TNXB-208ENST00000611016 NSD1Q96L73 2696 aaPredicted RBP8.88□□□□□ -0.99
TNXB-208ENST00000611016 CELSR3Q9NYQ7 3312 aa8.87□□□□□ -0.99
TNXB-208ENST00000611016 STAB2Q8WWQ8 2551 aa8.87□□□□□ -0.99
TNXB-208ENST00000611016 KRTAP21-3Q3LHN1 58 aa8.86□□□□□ -0.99
TNXB-208ENST00000611016 ITPR1Q14643 2758 aa8.86□□□□□ -0.99
TNXB-208ENST00000611016 KRTAP13-2Q52LG2 175 aa8.86□□□□□ -0.99
TNXB-208ENST00000611016 A6NN06 94 aa8.85□□□□□ -0.99
TNXB-208ENST00000611016 KRTAP13-1Q8IUC0 172 aa8.82□□□□□ -1
TNXB-208ENST00000611016 TACC2O95359 2948 aa8.77□□□□□ -1
TNXB-208ENST00000611016 SZT2Q5T011 3432 aa8.76□□□□□ -1.01
TNXB-208ENST00000611016 ATMQ13315 3056 aa8.76□□□□□ -1.01
TNXB-208ENST00000611016 KMT2BQ9UMN6 2715 aaPredicted RBP8.74□□□□□ -1.01
TNXB-208ENST00000611016 FREM2Q5SZK8 3169 aa8.73□□□□□ -1.01
TNXB-208ENST00000611016 A8MUU9 505 aa8.73□□□□□ -1.01
TNXB-208ENST00000611016 KALRNO60229 2985 aa8.72□□□□□ -1.01
TNXB-208ENST00000611016 FLNCQ14315 2725 aa8.72□□□□□ -1.01
TNXB-208ENST00000611016 KRTAP25-1Q3LHN0 102 aa8.71□□□□□ -1.01
TNXB-208ENST00000611016 COL12A1Q99715 3063 aa8.71□□□□□ -1.01
TNXB-208ENST00000611016 REV3LO60673 3130 aa8.71□□□□□ -1.02
TNXB-208ENST00000611016 C20orf166-AS1Q96NR2 134 aa8.71□□□□□ -1.02
TNXB-208ENST00000611016 FRYLO94915 3013 aa8.69□□□□□ -1.02
TNXB-208ENST00000611016 HIVEP1P15822 2718 aa8.68□□□□□ -1.02
TNXB-208ENST00000611016 UTP20O75691 2785 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms