RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 IGLV5-37A0A075B6J1 123 aa8.56□□□□□ -1.04
SMARCA4-216ENST00000591545 A0A1W2PNM2 257 aa8.56□□□□□ -1.04
SMARCA4-216ENST00000591545 IGLV5-48A0A075B6I7 105 aa8.56□□□□□ -1.04
SMARCA4-216ENST00000591545 LCA10Q71F78 164 aa8.56□□□□□ -1.04
SMARCA4-216ENST00000591545 TEP1Q99973 2627 aaKnown RBP8.55□□□□□ -1.04
SMARCA4-216ENST00000591545 A0A1W2PNN7 141 aa8.55□□□□□ -1.04
SMARCA4-216ENST00000591545 STAB1Q9NY15 2570 aa8.55□□□□□ -1.04
SMARCA4-216ENST00000591545 SPRR4Q96PI1 79 aa8.53□□□□□ -1.04
SMARCA4-216ENST00000591545 CDC42SE1Q9NRR8 79 aa8.51□□□□□ -1.05
SMARCA4-216ENST00000591545 C9orf92A6NGG3 77 aa8.5□□□□□ -1.05
SMARCA4-216ENST00000591545 BAHCC1Q9P281 2608 aa8.49□□□□□ -1.05
SMARCA4-216ENST00000591545 ANAPC11Q9NYG5 84 aa8.49□□□□□ -1.05
SMARCA4-216ENST00000591545 FAM104AQ969W3 186 aa8.48□□□□□ -1.05
SMARCA4-216ENST00000591545 ADGRG4Q8IZF6 3080 aa8.47□□□□□ -1.05
SMARCA4-216ENST00000591545 OCR1Q9BZK8 76 aa8.47□□□□□ -1.05
SMARCA4-216ENST00000591545 Q1T7F1 81 aa8.47□□□□□ -1.05
SMARCA4-216ENST00000591545 A0A0G2JQZ4 141 aa8.46□□□□□ -1.06
SMARCA4-216ENST00000591545 CR1P17927 2039 aa8.46□□□□□ -1.06
SMARCA4-216ENST00000591545 DMXL2Q8TDJ6 3036 aa8.46□□□□□ -1.06
SMARCA4-216ENST00000591545 RBM12B-AS1Q9P1G2 102 aa8.43□□□□□ -1.06
SMARCA4-216ENST00000591545 MAP1AP78559 2803 aaPredicted RBP8.43□□□□□ -1.06
SMARCA4-216ENST00000591545 DMXL1Q9Y485 3027 aa8.43□□□□□ -1.06
SMARCA4-216ENST00000591545 COL6A5A8TX70 2615 aa8.42□□□□□ -1.06
SMARCA4-216ENST00000591545 LOC400499M0QZD8 3231 aa8.42□□□□□ -1.06
SMARCA4-216ENST00000591545 Q5XG85 94 aa8.4□□□□□ -1.06
SMARCA4-216ENST00000591545 TEX15Q9BXT5 2789 aa8.4□□□□□ -1.07
SMARCA4-216ENST00000591545 ATMQ13315 3056 aa8.39□□□□□ -1.07
SMARCA4-216ENST00000591545 LRBAP50851 2863 aa8.38□□□□□ -1.07
SMARCA4-216ENST00000591545 IGLV7-46A0A075B6I9 117 aa8.37□□□□□ -1.07
SMARCA4-216ENST00000591545 IGSF10Q6WRI0 2623 aa8.37□□□□□ -1.07
SMARCA4-216ENST00000591545 UNC79Q9P2D8 2635 aa8.37□□□□□ -1.07
SMARCA4-216ENST00000591545 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.37□□□□□ -1.07
SMARCA4-216ENST00000591545 LCE6AA0A183 80 aa8.36□□□□□ -1.07
SMARCA4-216ENST00000591545 KALRNO60229 2985 aa8.34□□□□□ -1.07
SMARCA4-216ENST00000591545 Q75L30 129 aa8.33□□□□□ -1.08
SMARCA4-216ENST00000591545 PRR26Q8N8Z3 221 aa8.33□□□□□ -1.08
SMARCA4-216ENST00000591545 WDFY3Q8IZQ1 3526 aa8.33□□□□□ -1.08
SMARCA4-216ENST00000591545 Q8N1X5 172 aa8.32□□□□□ -1.08
SMARCA4-216ENST00000591545 FAM229BQ4G0N7 80 aa8.32□□□□□ -1.08
SMARCA4-216ENST00000591545 PLAC8Q9NZF1 115 aa8.31□□□□□ -1.08
SMARCA4-216ENST00000591545 Q6ZSA8 131 aa8.31□□□□□ -1.08
SMARCA4-216ENST00000591545 DMDP11532 3685 aa8.29□□□□□ -1.08
SMARCA4-216ENST00000591545 FP248Q71RG6 208 aaPredicted RBP8.27□□□□□ -1.09
SMARCA4-216ENST00000591545 LINC01558Q9Y6Z2 57 aa8.27□□□□□ -1.09
SMARCA4-216ENST00000591545 COL12A1Q99715 3063 aa8.26□□□□□ -1.09
SMARCA4-216ENST00000591545 A0A0D9SG42 100 aa8.25□□□□□ -1.09
SMARCA4-216ENST00000591545 TACC2O95359 2948 aa8.25□□□□□ -1.09
SMARCA4-216ENST00000591545 HRES1P13985 223 aa8.25□□□□□ -1.09
SMARCA4-216ENST00000591545 SPRR1AP35321 89 aa8.24□□□□□ -1.09
SMARCA4-216ENST00000591545 FLNCQ14315 2725 aa8.24□□□□□ -1.09
SMARCA4-216ENST00000591545 MMP24-AS1A0A0U1RRL7 71 aa8.23□□□□□ -1.09
SMARCA4-216ENST00000591545 CYSTM1Q9H1C7 97 aa8.23□□□□□ -1.09
SMARCA4-216ENST00000591545 A0A1B0GU33 70 aa8.23□□□□□ -1.09
SMARCA4-216ENST00000591545 CHD6Q8TD26 2715 aa8.22□□□□□ -1.09
SMARCA4-216ENST00000591545 LUZP6Q538Z0 58 aa8.22□□□□□ -1.09
SMARCA4-216ENST00000591545 Q8N9P0 234 aaPredicted RBP8.22□□□□□ -1.09
SMARCA4-216ENST00000591545 NOTCH1P46531 2555 aa8.21□□□□□ -1.1
SMARCA4-216ENST00000591545 Q5VSD8 79 aa8.2□□□□□ -1.1
SMARCA4-216ENST00000591545 MUC3AQ02505 3323 aa8.2□□□□□ -1.1
SMARCA4-216ENST00000591545 SPRR1BP22528 89 aa8.2□□□□□ -1.1
SMARCA4-216ENST00000591545 LINC01554Q52M75 96 aa8.19□□□□□ -1.1
SMARCA4-216ENST00000591545 CFAP47Q6ZTR5 3102 aa8.19□□□□□ -1.1
SMARCA4-216ENST00000591545 ZZEF1O43149 2961 aa8.19□□□□□ -1.1
SMARCA4-216ENST00000591545 M0R2T5 61 aa8.18□□□□□ -1.1
SMARCA4-216ENST00000591545 KRTAP1-5Q9BYS1 174 aa8.17□□□□□ -1.1
SMARCA4-216ENST00000591545 GCN1Q92616 2671 aaKnown RBP8.16□□□□□ -1.1
SMARCA4-216ENST00000591545 ZCCHC13Q8WW36 166 aaKnown RBP8.15□□□□□ -1.11
SMARCA4-216ENST00000591545 NBEAL1Q6ZS30 2694 aa8.14□□□□□ -1.11
SMARCA4-216ENST00000591545 HRNRQ86YZ3 2850 aaPredicted RBP8.14□□□□□ -1.11
SMARCA4-216ENST00000591545 DMAC1Q96GE9 116 aa8.14□□□□□ -1.11
SMARCA4-216ENST00000591545 OXTP01178 125 aa8.13□□□□□ -1.11
SMARCA4-216ENST00000591545 KRTAP21-3Q3LHN1 58 aa8.13□□□□□ -1.11
SMARCA4-216ENST00000591545 LINC00472Q9H8W2 130 aa8.13□□□□□ -1.11
SMARCA4-216ENST00000591545 KRTAP10-1P60331 282 aa8.13□□□□□ -1.11
SMARCA4-216ENST00000591545 ASPMQ8IZT6 3477 aa8.12□□□□□ -1.11
SMARCA4-216ENST00000591545 Q8NDZ9 215 aa8.12□□□□□ -1.11
SMARCA4-216ENST00000591545 LAMA5O15230 3695 aa8.11□□□□□ -1.11
SMARCA4-216ENST00000591545 ITPR1Q14643 2758 aa8.1□□□□□ -1.11
SMARCA4-216ENST00000591545 ZFHX4Q86UP3 3567 aa8.1□□□□□ -1.11
SMARCA4-216ENST00000591545 KRTAP10-2P60368 255 aa8.1□□□□□ -1.11
SMARCA4-216ENST00000591545 Q5VV11 94 aa8.1□□□□□ -1.11
SMARCA4-216ENST00000591545 SEC61BP60468 96 aaKnown RBP8.09□□□□□ -1.11
SMARCA4-216ENST00000591545 LINC00483Q53H64 154 aa8.08□□□□□ -1.12
SMARCA4-216ENST00000591545 UTP20O75691 2785 aaKnown RBP8.08□□□□□ -1.12
SMARCA4-216ENST00000591545 Q5W150 140 aa8.07□□□□□ -1.12
SMARCA4-216ENST00000591545 CAMK2N1Q7Z7J9 78 aa8.06□□□□□ -1.12
SMARCA4-216ENST00000591545 Q6ZR54 194 aa8.06□□□□□ -1.12
SMARCA4-216ENST00000591545 UBR5O95071 2799 aaPredicted RBP8.06□□□□□ -1.12
SMARCA4-216ENST00000591545 RELNP78509 3460 aa8.04□□□□□ -1.12
SMARCA4-216ENST00000591545 CSAG1Q6PB30 78 aa8.04□□□□□ -1.12
SMARCA4-216ENST00000591545 KRTAP26-1Q6PEX3 210 aa8.03□□□□□ -1.12
SMARCA4-216ENST00000591545 H3BS24 57 aa8.02□□□□□ -1.13
SMARCA4-216ENST00000591545 S4R3F8 94 aa8.01□□□□□ -1.13
SMARCA4-216ENST00000591545 NBEAL2Q6ZNJ1 2754 aa8□□□□□ -1.13
SMARCA4-216ENST00000591545 ITPR2Q14571 2701 aa7.99□□□□□ -1.13
SMARCA4-216ENST00000591545 DCHS1Q96JQ0 3298 aa7.99□□□□□ -1.13
SMARCA4-216ENST00000591545 SPINK7P58062 85 aa7.98□□□□□ -1.13
SMARCA4-216ENST00000591545 ZANQ9Y493 2812 aa7.98□□□□□ -1.13
SMARCA4-216ENST00000591545 NSD1Q96L73 2696 aaPredicted RBP7.97□□□□□ -1.13
SMARCA4-216ENST00000591545 PRAC1Q96KF2 57 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms