RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 DMAC1Q96GE9 116 aa7.69□□□□□ -1.18
SPG11-203ENST00000535302 KRTAP1-5Q9BYS1 174 aa7.69□□□□□ -1.18
SPG11-203ENST00000535302 CYSTM1Q9H1C7 97 aa7.69□□□□□ -1.18
SPG11-203ENST00000535302 Q5W150 140 aa7.68□□□□□ -1.18
SPG11-203ENST00000535302 MMP24-AS1A0A0U1RRL7 71 aa7.68□□□□□ -1.18
SPG11-203ENST00000535302 M0QZ58 72 aa7.67□□□□□ -1.18
SPG11-203ENST00000535302 Q75L30 129 aa7.67□□□□□ -1.18
SPG11-203ENST00000535302 PLAC8Q9NZF1 115 aa7.67□□□□□ -1.18
SPG11-203ENST00000535302 A0A0C4DFX4 3053 aa7.67□□□□□ -1.18
SPG11-203ENST00000535302 LAMA3Q16787 3333 aa7.67□□□□□ -1.18
SPG11-203ENST00000535302 A0A0A0MQY5 61 aa7.66□□□□□ -1.18
SPG11-203ENST00000535302 SPATA8Q6RVD6 105 aa7.66□□□□□ -1.18
SPG11-203ENST00000535302 FLNAP21333 2647 aaKnown RBP7.65□□□□□ -1.18
SPG11-203ENST00000535302 REV3LO60673 3130 aa7.63□□□□□ -1.19
SPG11-203ENST00000535302 KRTAP10-2P60368 255 aa7.63□□□□□ -1.19
SPG11-203ENST00000535302 ITPR3Q14573 2671 aa7.62□□□□□ -1.19
SPG11-203ENST00000535302 ADM2Q7Z4H4 148 aa7.62□□□□□ -1.19
SPG11-203ENST00000535302 KRTAP10-1P60331 282 aa7.61□□□□□ -1.19
SPG11-203ENST00000535302 RANBP2P49792 3224 aaKnown RBP7.6□□□□□ -1.19
SPG11-203ENST00000535302 PLAC4Q8WY50 150 aa7.59□□□□□ -1.19
SPG11-203ENST00000535302 TRIOO75962 3097 aa7.59□□□□□ -1.19
SPG11-203ENST00000535302 Q5VV11 94 aa7.59□□□□□ -1.19
SPG11-203ENST00000535302 HTTP42858 3142 aa7.59□□□□□ -1.19
SPG11-203ENST00000535302 FP248Q71RG6 208 aaPredicted RBP7.58□□□□□ -1.2
SPG11-203ENST00000535302 Q5XG85 94 aa7.57□□□□□ -1.2
SPG11-203ENST00000535302 DNAH14Q0VDD8 3507 aa7.57□□□□□ -1.2
SPG11-203ENST00000535302 LINC01558Q9Y6Z2 57 aa7.57□□□□□ -1.2
SPG11-203ENST00000535302 SPRR1AP35321 89 aa7.55□□□□□ -1.2
SPG11-203ENST00000535302 ROMO1P60602 79 aa7.55□□□□□ -1.2
SPG11-203ENST00000535302 ATRQ13535 2644 aa7.54□□□□□ -1.2
SPG11-203ENST00000535302 PANO1I0J062 215 aa7.54□□□□□ -1.2
SPG11-203ENST00000535302 LINC00472Q9H8W2 130 aa7.53□□□□□ -1.2
SPG11-203ENST00000535302 SEC61BP60468 96 aaKnown RBP7.52□□□□□ -1.2
SPG11-203ENST00000535302 UNC80Q8N2C7 3258 aa7.52□□□□□ -1.21
SPG11-203ENST00000535302 CHD9Q3L8U1 2897 aa7.52□□□□□ -1.21
SPG11-203ENST00000535302 RPL37P61927 97 aaKnown RBP7.51□□□□□ -1.21
SPG11-203ENST00000535302 AKAP13Q12802 2813 aa7.5□□□□□ -1.21
SPG11-203ENST00000535302 KRTAP26-1Q6PEX3 210 aa7.5□□□□□ -1.21
SPG11-203ENST00000535302 MGAQ8IWI9 3026 aa7.49□□□□□ -1.21
SPG11-203ENST00000535302 PRUNE2Q8WUY3 3088 aa7.49□□□□□ -1.21
SPG11-203ENST00000535302 MAST4O15021 2626 aa7.48□□□□□ -1.21
SPG11-203ENST00000535302 CDH23Q9H251 3354 aa7.48□□□□□ -1.21
SPG11-203ENST00000535302 HELZ2Q9BYK8 2649 aaKnown RBP7.47□□□□□ -1.21
SPG11-203ENST00000535302 CFAP46Q8IYW2 2715 aa7.47□□□□□ -1.21
SPG11-203ENST00000535302 C20orf166-AS1Q96NR2 134 aa7.46□□□□□ -1.22
SPG11-203ENST00000535302 VPS13AQ96RL7 3174 aa7.46□□□□□ -1.22
SPG11-203ENST00000535302 LCE6AA0A183 80 aa7.45□□□□□ -1.22
SPG11-203ENST00000535302 SZT2Q5T011 3432 aa7.45□□□□□ -1.22
SPG11-203ENST00000535302 WDFY4Q6ZS81 3184 aa7.43□□□□□ -1.22
SPG11-203ENST00000535302 SPRR1BP22528 89 aa7.42□□□□□ -1.22
SPG11-203ENST00000535302 A8MU10 97 aa7.41□□□□□ -1.22
SPG11-203ENST00000535302 Q6ZR54 194 aa7.4□□□□□ -1.22
SPG11-203ENST00000535302 A0A087X002 238 aa7.4□□□□□ -1.23
SPG11-203ENST00000535302 OXTP01178 125 aa7.38□□□□□ -1.23
SPG11-203ENST00000535302 CENPEQ02224 2701 aa7.38□□□□□ -1.23
SPG11-203ENST00000535302 CHD6Q8TD26 2715 aa7.36□□□□□ -1.23
SPG11-203ENST00000535302 NOTCH2NLQ7Z3S9 236 aa7.35□□□□□ -1.23
SPG11-203ENST00000535302 KRTAP11-1Q8IUC1 163 aa7.34□□□□□ -1.24
SPG11-203ENST00000535302 COL6A3P12111 3177 aa7.33□□□□□ -1.24
SPG11-203ENST00000535302 TEX15Q9BXT5 2789 aa7.31□□□□□ -1.24
SPG11-203ENST00000535302 CFAP47Q6ZTR5 3102 aa7.3□□□□□ -1.24
SPG11-203ENST00000535302 DMBT1Q9UGM3 2413 aaPredicted RBP7.3□□□□□ -1.24
SPG11-203ENST00000535302 KRTAP4-16G5E9R7 235 aaPredicted RBP7.28□□□□□ -1.24
SPG11-203ENST00000535302 TEP1Q99973 2627 aaKnown RBP7.28□□□□□ -1.24
SPG11-203ENST00000535302 A8MUU9 505 aa7.27□□□□□ -1.25
SPG11-203ENST00000535302 SPEGQ15772 3267 aa7.26□□□□□ -1.25
SPG11-203ENST00000535302 KRTAP16-1A8MUX0 517 aa7.26□□□□□ -1.25
SPG11-203ENST00000535302 NBEAL1Q6ZS30 2694 aa7.25□□□□□ -1.25
SPG11-203ENST00000535302 FRYQ5TBA9 3013 aa7.24□□□□□ -1.25
SPG11-203ENST00000535302 TRANK1O15050 2925 aa7.23□□□□□ -1.25
SPG11-203ENST00000535302 C10orf95Q9H7T3 257 aa7.23□□□□□ -1.25
SPG11-203ENST00000535302 NDUFAF8A1L188 74 aa7.22□□□□□ -1.25
SPG11-203ENST00000535302 GCN1Q92616 2671 aaKnown RBP7.2□□□□□ -1.26
SPG11-203ENST00000535302 VCANP13611 3396 aa7.19□□□□□ -1.26
SPG11-203ENST00000535302 KRTAP29-1A8MX34 341 aaPredicted RBP7.19□□□□□ -1.26
SPG11-203ENST00000535302 CRYBG3Q68DQ2 2970 aa7.18□□□□□ -1.26
SPG11-203ENST00000535302 KRTAP7-1Q8IUC3 87 aa7.17□□□□□ -1.26
SPG11-203ENST00000535302 NBEAL2Q6ZNJ1 2754 aa7.17□□□□□ -1.26
SPG11-203ENST00000535302 STAB1Q9NY15 2570 aa7.17□□□□□ -1.26
SPG11-203ENST00000535302 DSPP15924 2871 aaKnown RBP7.16□□□□□ -1.26
SPG11-203ENST00000535302 A0A1B0GVY2 172 aa7.15□□□□□ -1.26
SPG11-203ENST00000535302 KRTAP25-1Q3LHN0 102 aa7.14□□□□□ -1.27
SPG11-203ENST00000535302 Q6ZRN7 208 aaPredicted RBP7.13□□□□□ -1.27
SPG11-203ENST00000535302 KALRNO60229 2985 aa7.12□□□□□ -1.27
SPG11-203ENST00000535302 MAP1AP78559 2803 aaPredicted RBP7.12□□□□□ -1.27
SPG11-203ENST00000535302 KRTAP13-2Q52LG2 175 aa7.11□□□□□ -1.27
SPG11-203ENST00000535302 COL6A5A8TX70 2615 aa7.1□□□□□ -1.27
SPG11-203ENST00000535302 UNC79Q9P2D8 2635 aa7.09□□□□□ -1.27
SPG11-203ENST00000535302 SETXQ7Z333 2677 aaKnown RBP7.09□□□□□ -1.27
SPG11-203ENST00000535302 ZNF292O60281 2723 aa7.08□□□□□ -1.28
SPG11-203ENST00000535302 STAB2Q8WWQ8 2551 aa7.08□□□□□ -1.28
SPG11-203ENST00000535302 LAMA1P25391 3075 aa7.07□□□□□ -1.28
SPG11-203ENST00000535302 DMXL2Q8TDJ6 3036 aa7.05□□□□□ -1.28
SPG11-203ENST00000535302 NOTCH1P46531 2555 aa7.03□□□□□ -1.28
SPG11-203ENST00000535302 KRTAP10-8P60410 259 aa7.02□□□□□ -1.29
SPG11-203ENST00000535302 IGSF10Q6WRI0 2623 aa7.01□□□□□ -1.29
SPG11-203ENST00000535302 SPTBN5Q9NRC6 3674 aaKnown RBP7.01□□□□□ -1.29
SPG11-203ENST00000535302 TNP1P09430 55 aa7.01□□□□□ -1.29
SPG11-203ENST00000535302 MYO15AQ9UKN7 3530 aa6.99□□□□□ -1.29
SPG11-203ENST00000535302 LRBAP50851 2863 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms