RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 IGF2RP11717 2491 aa3.56□□□□□ -1.84
LINC02397-201ENST00000504409 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
LINC02397-201ENST00000504409 R4GN34 69 aa3.53□□□□□ -1.84
LINC02397-201ENST00000504409 A0A0D9SG42 100 aa3.52□□□□□ -1.85
LINC02397-201ENST00000504409 KRTAP13-1Q8IUC0 172 aa3.51□□□□□ -1.85
LINC02397-201ENST00000504409 EPG5Q9HCE0 2579 aa3.49□□□□□ -1.85
LINC02397-201ENST00000504409 FLG2Q5D862 2391 aaPredicted RBP3.48□□□□□ -1.85
LINC02397-201ENST00000504409 P0C880 135 aa3.47□□□□□ -1.85
LINC02397-201ENST00000504409 INE1O15225 51 aa3.47□□□□□ -1.85
LINC02397-201ENST00000504409 Q6ZSA8 131 aa3.46□□□□□ -1.86
LINC02397-201ENST00000504409 C9orf92A6NGG3 77 aa3.46□□□□□ -1.86
LINC02397-201ENST00000504409 TNP1P09430 55 aa3.46□□□□□ -1.86
LINC02397-201ENST00000504409 KRTAP24-1Q3LI83 254 aa3.46□□□□□ -1.86
LINC02397-201ENST00000504409 K7EIL1 84 aa3.45□□□□□ -1.86
LINC02397-201ENST00000504409 PRRC2CQ9Y520 2896 aaKnown RBP3.44□□□□□ -1.86
LINC02397-201ENST00000504409 GCN1Q92616 2671 aaKnown RBP3.43□□□□□ -1.86
LINC02397-201ENST00000504409 FLNAP21333 2647 aaKnown RBP3.43□□□□□ -1.86
LINC02397-201ENST00000504409 NBEAL1Q6ZS30 2694 aa3.42□□□□□ -1.86
LINC02397-201ENST00000504409 SMR3AQ99954 134 aa3.42□□□□□ -1.86
LINC02397-201ENST00000504409 KRTAP10-11P60412 298 aa3.4□□□□□ -1.87
LINC02397-201ENST00000504409 H0YAA0 97 aa3.39□□□□□ -1.87
LINC02397-201ENST00000504409 HELZ2Q9BYK8 2649 aaKnown RBP3.38□□□□□ -1.87
LINC02397-201ENST00000504409 Q6ZRN7 208 aaPredicted RBP3.38□□□□□ -1.87
LINC02397-201ENST00000504409 DMBT1Q9UGM3 2413 aaPredicted RBP3.37□□□□□ -1.87
LINC02397-201ENST00000504409 KRTAP13-3Q3SY46 172 aa3.36□□□□□ -1.87
LINC02397-201ENST00000504409 KRTAP10-9P60411 292 aa3.36□□□□□ -1.87
LINC02397-201ENST00000504409 UNC79Q9P2D8 2635 aa3.36□□□□□ -1.87
LINC02397-201ENST00000504409 CHD6Q8TD26 2715 aa3.35□□□□□ -1.87
LINC02397-201ENST00000504409 KRTAP23-1A1A580 65 aa3.34□□□□□ -1.87
LINC02397-201ENST00000504409 KRTAP1-3Q8IUG1 177 aa3.34□□□□□ -1.87
LINC02397-201ENST00000504409 A8MU10 97 aa3.33□□□□□ -1.88
LINC02397-201ENST00000504409 Q5VSD8 79 aa3.33□□□□□ -1.88
LINC02397-201ENST00000504409 MAP1AP78559 2803 aaPredicted RBP3.32□□□□□ -1.88
LINC02397-201ENST00000504409 KRTAP1-1Q07627 177 aa3.32□□□□□ -1.88
LINC02397-201ENST00000504409 MGAM2Q2M2H8 2515 aa3.31□□□□□ -1.88
LINC02397-201ENST00000504409 TRANK1O15050 2925 aa3.31□□□□□ -1.88
LINC02397-201ENST00000504409 ITPR3Q14573 2671 aa3.31□□□□□ -1.88
LINC02397-201ENST00000504409 KRTAP10-3P60369 221 aa3.3□□□□□ -1.88
LINC02397-201ENST00000504409 PRO2289Q9P1D8 64 aa3.29□□□□□ -1.88
LINC02397-201ENST00000504409 ATRQ13535 2644 aa3.28□□□□□ -1.88
LINC02397-201ENST00000504409 J3QL48 77 aa3.27□□□□□ -1.89
LINC02397-201ENST00000504409 NSD1Q96L73 2696 aaPredicted RBP3.27□□□□□ -1.89
LINC02397-201ENST00000504409 TEP1Q99973 2627 aaKnown RBP3.27□□□□□ -1.89
LINC02397-201ENST00000504409 KRTAP7-1Q8IUC3 87 aa3.25□□□□□ -1.89
LINC02397-201ENST00000504409 ITPR1Q14643 2758 aa3.24□□□□□ -1.89
LINC02397-201ENST00000504409 CFAP46Q8IYW2 2715 aa3.24□□□□□ -1.89
LINC02397-201ENST00000504409 KRTAP15-1Q3LI76 137 aa3.24□□□□□ -1.89
LINC02397-201ENST00000504409 APCP25054 2843 aa3.23□□□□□ -1.89
LINC02397-201ENST00000504409 KRTAP13-4Q3LI77 160 aa3.22□□□□□ -1.89
LINC02397-201ENST00000504409 MAST4O15021 2626 aa3.21□□□□□ -1.9
LINC02397-201ENST00000504409 KRTAP1-5Q9BYS1 174 aa3.21□□□□□ -1.9
LINC02397-201ENST00000504409 C10orf95Q9H7T3 257 aa3.21□□□□□ -1.9
LINC02397-201ENST00000504409 USP24Q9UPU5 2620 aa3.21□□□□□ -1.9
LINC02397-201ENST00000504409 ZNF292O60281 2723 aa3.2□□□□□ -1.9
LINC02397-201ENST00000504409 AKAP13Q12802 2813 aa3.19□□□□□ -1.9
LINC02397-201ENST00000504409 SETXQ7Z333 2677 aaKnown RBP3.19□□□□□ -1.9
LINC02397-201ENST00000504409 UTP20O75691 2785 aaKnown RBP3.18□□□□□ -1.9
LINC02397-201ENST00000504409 NOTCH1P46531 2555 aa3.18□□□□□ -1.9
LINC02397-201ENST00000504409 KRTAP13-2Q52LG2 175 aa3.18□□□□□ -1.9
LINC02397-201ENST00000504409 COL6A5A8TX70 2615 aa3.17□□□□□ -1.9
LINC02397-201ENST00000504409 ITPR2Q14571 2701 aa3.17□□□□□ -1.9
LINC02397-201ENST00000504409 STAB2Q8WWQ8 2551 aa3.17□□□□□ -1.9
LINC02397-201ENST00000504409 EP400Q96L91 3159 aa3.15□□□□□ -1.9
LINC02397-201ENST00000504409 ZFHX3Q15911 3703 aa3.15□□□□□ -1.91
LINC02397-201ENST00000504409 XP32Q5T750 250 aa3.14□□□□□ -1.91
LINC02397-201ENST00000504409 TPRXLQ17RH7 258 aa3.13□□□□□ -1.91
LINC02397-201ENST00000504409 BAHCC1Q9P281 2608 aa3.13□□□□□ -1.91
LINC02397-201ENST00000504409 TEX15Q9BXT5 2789 aa3.13□□□□□ -1.91
LINC02397-201ENST00000504409 NIPBLQ6KC79 2804 aaeCLIP3.13□□□□□ -1.91
LINC02397-201ENST00000504409 STAB1Q9NY15 2570 aa3.1□□□□□ -1.91
LINC02397-201ENST00000504409 CENPFP49454 3210 aa3.1□□□□□ -1.91
LINC02397-201ENST00000504409 KRTAP12-2P59991 146 aa3.08□□□□□ -1.92
LINC02397-201ENST00000504409 KRTAP1-4P0C5Y4 121 aa3.08□□□□□ -1.92
LINC02397-201ENST00000504409 UBR5O95071 2799 aaPredicted RBP3.07□□□□□ -1.92
LINC02397-201ENST00000504409 KRTAP10-1P60331 282 aa3.06□□□□□ -1.92
LINC02397-201ENST00000504409 HECTD1Q9ULT8 2610 aa3.06□□□□□ -1.92
LINC02397-201ENST00000504409 TGP01266 2768 aa3.05□□□□□ -1.92
LINC02397-201ENST00000504409 KRTAP12-1P59990 96 aa3.05□□□□□ -1.92
LINC02397-201ENST00000504409 FLNBO75369 2602 aaKnown RBP3.04□□□□□ -1.92
LINC02397-201ENST00000504409 KRTAP19-4Q3LI73 84 aa3.04□□□□□ -1.92
LINC02397-201ENST00000504409 SMR3BP02814 79 aaPredicted RBP3.03□□□□□ -1.92
LINC02397-201ENST00000504409 NBEAL2Q6ZNJ1 2754 aa3.03□□□□□ -1.92
LINC02397-201ENST00000504409 M0R2T5 61 aa3.02□□□□□ -1.93
LINC02397-201ENST00000504409 ALMS1Q8TCU4 4167 aa3.01□□□□□ -1.93
LINC02397-201ENST00000504409 A0A0C4DFX4 3053 aa3□□□□□ -1.93
LINC02397-201ENST00000504409 IGSF10Q6WRI0 2623 aa2.99□□□□□ -1.93
LINC02397-201ENST00000504409 CHD9Q3L8U1 2897 aa2.99□□□□□ -1.93
LINC02397-201ENST00000504409 KRTAP10-2P60368 255 aa2.99□□□□□ -1.93
LINC02397-201ENST00000504409 KRTAP21-3Q3LHN1 58 aa2.98□□□□□ -1.93
LINC02397-201ENST00000504409 DSPP15924 2871 aaKnown RBP2.95□□□□□ -1.94
LINC02397-201ENST00000504409 KRTAP10-6P60371 365 aaPredicted RBP2.95□□□□□ -1.94
LINC02397-201ENST00000504409 KRTAP10-8P60410 259 aa2.94□□□□□ -1.94
LINC02397-201ENST00000504409 TNRC18O15417 2968 aaPredicted RBP2.94□□□□□ -1.94
LINC02397-201ENST00000504409 DNAH12Q6ZR08 3092 aa2.93□□□□□ -1.94
LINC02397-201ENST00000504409 LRBAP50851 2863 aa2.93□□□□□ -1.94
LINC02397-201ENST00000504409 CHD7Q9P2D1 2997 aa2.91□□□□□ -1.94
LINC02397-201ENST00000504409 HRNRQ86YZ3 2850 aaPredicted RBP2.9□□□□□ -1.95
LINC02397-201ENST00000504409 SRCAPQ6ZRS2 3230 aa2.89□□□□□ -1.95
LINC02397-201ENST00000504409 FLNCQ14315 2725 aa2.88□□□□□ -1.95
LINC02397-201ENST00000504409 MGAQ8IWI9 3026 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms