RNA–Protein interactions for RNA: ENST00000504082.1

AC004069.1-201, humanhuman

TSL 4 BASIC

Gene AC004069.1, Length 549 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004069.1-201ENST00000504082 H1FX-AS1Q4G0G2 97 aa3.11□□□□□ -1.91
AC004069.1-201ENST00000504082 DEFB124Q8NES8 71 aa3.11□□□□□ -1.91
AC004069.1-201ENST00000504082 CRIPTQ9P021 101 aa3.11□□□□□ -1.91
AC004069.1-201ENST00000504082 DNAH14Q0VDD8 3507 aa3.11□□□□□ -1.91
AC004069.1-201ENST00000504082 ANKRD17O75179 2603 aaKnown RBP3.1□□□□□ -1.91
AC004069.1-201ENST00000504082 CACNA1HO95180 2353 aa3.1□□□□□ -1.91
AC004069.1-201ENST00000504082 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.91
AC004069.1-201ENST00000504082 CIRBP-AS1Q8TBR5 109 aa3.09□□□□□ -1.91
AC004069.1-201ENST00000504082 PRUNE2Q8WUY3 3088 aa3.09□□□□□ -1.91
AC004069.1-201ENST00000504082 ACACAQ13085 2346 aa3.09□□□□□ -1.92
AC004069.1-201ENST00000504082 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.09□□□□□ -1.92
AC004069.1-201ENST00000504082 ANKHD1Q8IWZ3 2542 aaKnown RBP3.08□□□□□ -1.92
AC004069.1-201ENST00000504082 A0A096LNI7 61 aa3.08□□□□□ -1.92
AC004069.1-201ENST00000504082 KRTAP10-9P60411 292 aa3.08□□□□□ -1.92
AC004069.1-201ENST00000504082 TPRXLQ17RH7 258 aa3.08□□□□□ -1.92
AC004069.1-201ENST00000504082 WDFY4Q6ZS81 3184 aa3.08□□□□□ -1.92
AC004069.1-201ENST00000504082 ABCA2Q9BZC7 2435 aa3.08□□□□□ -1.92
AC004069.1-201ENST00000504082 DEFB4AO15263 64 aa3.07□□□□□ -1.92
AC004069.1-201ENST00000504082 DEFB135Q30KP9 77 aa3.06□□□□□ -1.92
AC004069.1-201ENST00000504082 CAMK2N1Q7Z7J9 78 aa3.06□□□□□ -1.92
AC004069.1-201ENST00000504082 LAMA2P24043 3122 aaKnown RBP3.06□□□□□ -1.92
AC004069.1-201ENST00000504082 MAP1AP78559 2803 aaPredicted RBP3.06□□□□□ -1.92
AC004069.1-201ENST00000504082 TRIOBPQ9H2D6 2365 aa3.05□□□□□ -1.92
AC004069.1-201ENST00000504082 NOTCH3Q9UM47 2321 aa3.05□□□□□ -1.92
AC004069.1-201ENST00000504082 COX6B2Q6YFQ2 88 aa3.05□□□□□ -1.92
AC004069.1-201ENST00000504082 TACC2O95359 2948 aa3.05□□□□□ -1.92
AC004069.1-201ENST00000504082 LAMA1P25391 3075 aa3.04□□□□□ -1.92
AC004069.1-201ENST00000504082 SPINK1P00995 79 aa3.04□□□□□ -1.92
AC004069.1-201ENST00000504082 CREBBPQ92793 2442 aa3.03□□□□□ -1.92
AC004069.1-201ENST00000504082 SPTA1P02549 2419 aa3.03□□□□□ -1.92
AC004069.1-201ENST00000504082 FREM2Q5SZK8 3169 aa3.03□□□□□ -1.92
AC004069.1-201ENST00000504082 RPL37P61927 97 aaKnown RBP3.02□□□□□ -1.93
AC004069.1-201ENST00000504082 C14orf177Q52M58 125 aa3.02□□□□□ -1.93
AC004069.1-201ENST00000504082 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
AC004069.1-201ENST00000504082 KRTAP13-1Q8IUC0 172 aa3.02□□□□□ -1.93
AC004069.1-201ENST00000504082 CEP290O15078 2479 aa3.02□□□□□ -1.93
AC004069.1-201ENST00000504082 IGF2RP11717 2491 aa3.02□□□□□ -1.93
AC004069.1-201ENST00000504082 DMXL2Q8TDJ6 3036 aa3.02□□□□□ -1.93
AC004069.1-201ENST00000504082 ITPR1Q14643 2758 aa3.01□□□□□ -1.93
AC004069.1-201ENST00000504082 USP34Q70CQ2 3546 aa3.01□□□□□ -1.93
AC004069.1-201ENST00000504082 PRRC2CQ9Y520 2896 aaKnown RBP3.01□□□□□ -1.93
AC004069.1-201ENST00000504082 TENM2Q9NT68 2774 aa3.01□□□□□ -1.93
AC004069.1-201ENST00000504082 ZDBF2Q9HCK1 2354 aa3.01□□□□□ -1.93
AC004069.1-201ENST00000504082 SPTBN5Q9NRC6 3674 aaKnown RBP3□□□□□ -1.93
AC004069.1-201ENST00000504082 LAMA3Q16787 3333 aa3□□□□□ -1.93
AC004069.1-201ENST00000504082 SPINK6Q6UWN8 80 aa3□□□□□ -1.93
AC004069.1-201ENST00000504082 REV3LO60673 3130 aa2.99□□□□□ -1.93
AC004069.1-201ENST00000504082 SPTAN1Q13813 2472 aaKnown RBP2.99□□□□□ -1.93
AC004069.1-201ENST00000504082 SPTBN4Q9H254 2564 aa2.99□□□□□ -1.93
AC004069.1-201ENST00000504082 TYMSOSQ8TAI1 123 aa2.99□□□□□ -1.93
AC004069.1-201ENST00000504082 SPG11Q96JI7 2443 aa2.99□□□□□ -1.93
AC004069.1-201ENST00000504082 KRTAP24-1Q3LI83 254 aa2.98□□□□□ -1.93
AC004069.1-201ENST00000504082 NCOR2Q9Y618 2525 aa2.98□□□□□ -1.93
AC004069.1-201ENST00000504082 DMDP11532 3685 aa2.96□□□□□ -1.94
AC004069.1-201ENST00000504082 C10orf95Q9H7T3 257 aa2.96□□□□□ -1.94
AC004069.1-201ENST00000504082 DCHS1Q96JQ0 3298 aa2.95□□□□□ -1.94
AC004069.1-201ENST00000504082 HRNRQ86YZ3 2850 aaPredicted RBP2.95□□□□□ -1.94
AC004069.1-201ENST00000504082 BRCA2P51587 3418 aa2.94□□□□□ -1.94
AC004069.1-201ENST00000504082 GVINP1Q7Z2Y8 2422 aa2.94□□□□□ -1.94
AC004069.1-201ENST00000504082 OTOGQ6ZRI0 2925 aa2.94□□□□□ -1.94
AC004069.1-201ENST00000504082 NBASA2RRP1 2371 aa2.94□□□□□ -1.94
AC004069.1-201ENST00000504082 VCANP13611 3396 aa2.94□□□□□ -1.94
AC004069.1-201ENST00000504082 DCHS2Q6V1P9 2916 aa2.93□□□□□ -1.94
AC004069.1-201ENST00000504082 KRTAP10-7P60409 375 aaPredicted RBP2.93□□□□□ -1.94
AC004069.1-201ENST00000504082 ASH1LQ9NR48 2969 aaKnown RBP2.93□□□□□ -1.94
AC004069.1-201ENST00000504082 BOD1L1Q8NFC6 3051 aa2.92□□□□□ -1.94
AC004069.1-201ENST00000504082 MAPK1IP1LQ8NDC0 245 aa2.92□□□□□ -1.94
AC004069.1-201ENST00000504082 PLAC4Q8WY50 150 aa2.92□□□□□ -1.94
AC004069.1-201ENST00000504082 WDFY3Q8IZQ1 3526 aa2.92□□□□□ -1.94
AC004069.1-201ENST00000504082 KRTAP2-2Q9BYT5 123 aa2.91□□□□□ -1.94
AC004069.1-201ENST00000504082 CDH23Q9H251 3354 aa2.91□□□□□ -1.94
AC004069.1-201ENST00000504082 CELSR2Q9HCU4 2923 aa2.91□□□□□ -1.94
AC004069.1-201ENST00000504082 LRBAP50851 2863 aa2.9□□□□□ -1.95
AC004069.1-201ENST00000504082 KRTAP1-5Q9BYS1 174 aa2.9□□□□□ -1.95
AC004069.1-201ENST00000504082 FLG2Q5D862 2391 aaPredicted RBP2.9□□□□□ -1.95
AC004069.1-201ENST00000504082 CSPG4Q6UVK1 2322 aa2.9□□□□□ -1.95
AC004069.1-201ENST00000504082 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
AC004069.1-201ENST00000504082 SETXQ7Z333 2677 aaKnown RBP2.88□□□□□ -1.95
AC004069.1-201ENST00000504082 CSMD1Q96PZ7 3565 aa2.87□□□□□ -1.95
AC004069.1-201ENST00000504082 TLN1Q9Y490 2541 aaKnown RBP2.87□□□□□ -1.95
AC004069.1-201ENST00000504082 RIF1Q5UIP0 2472 aaKnown RBP2.87□□□□□ -1.95
AC004069.1-201ENST00000504082 SPEGQ15772 3267 aa2.87□□□□□ -1.95
AC004069.1-201ENST00000504082 ZFHX4Q86UP3 3567 aa2.86□□□□□ -1.95
AC004069.1-201ENST00000504082 TLN2Q9Y4G6 2542 aa2.86□□□□□ -1.95
AC004069.1-201ENST00000504082 PRO2289Q9P1D8 64 aa2.86□□□□□ -1.95
AC004069.1-201ENST00000504082 APLNQ9ULZ1 77 aa2.86□□□□□ -1.95
AC004069.1-201ENST00000504082 S4R3F8 94 aa2.86□□□□□ -1.95
AC004069.1-201ENST00000504082 ATRXP46100 2492 aa2.86□□□□□ -1.95
AC004069.1-201ENST00000504082 APCP25054 2843 aa2.86□□□□□ -1.95
AC004069.1-201ENST00000504082 CELSR3Q9NYQ7 3312 aa2.85□□□□□ -1.95
AC004069.1-201ENST00000504082 CELSR1Q9NYQ6 3014 aa2.84□□□□□ -1.95
AC004069.1-201ENST00000504082 COL12A1Q99715 3063 aa2.84□□□□□ -1.95
AC004069.1-201ENST00000504082 KRTAP10-6P60371 365 aaPredicted RBP2.84□□□□□ -1.95
AC004069.1-201ENST00000504082 FN1P02751 2386 aaKnown RBP2.84□□□□□ -1.95
AC004069.1-201ENST00000504082 TEX15Q9BXT5 2789 aa2.83□□□□□ -1.96
AC004069.1-201ENST00000504082 JMJD1CQ15652 2540 aa2.83□□□□□ -1.96
AC004069.1-201ENST00000504082 A0A0D9SG42 100 aa2.83□□□□□ -1.96
AC004069.1-201ENST00000504082 KRTAP10-3P60369 221 aa2.83□□□□□ -1.96
AC004069.1-201ENST00000504082 SPACA4Q8TDM5 124 aa2.83□□□□□ -1.96
AC004069.1-201ENST00000504082 NF1P21359 2839 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms