RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 NUPR2A6NF83 97 aa2.91□□□□□ -1.94
MSL3-217ENST00000494268 SPINK7P58062 85 aa2.91□□□□□ -1.94
MSL3-217ENST00000494268 SMR3AQ99954 134 aa2.91□□□□□ -1.94
MSL3-217ENST00000494268 WFDC10AQ9H1F0 79 aa2.91□□□□□ -1.94
MSL3-217ENST00000494268 CSMD1Q96PZ7 3565 aa2.9□□□□□ -1.94
MSL3-217ENST00000494268 MAP1AP78559 2803 aaPredicted RBP2.9□□□□□ -1.94
MSL3-217ENST00000494268 ABCA12Q86UK0 2595 aa2.9□□□□□ -1.94
MSL3-217ENST00000494268 ITPR2Q14571 2701 aa2.9□□□□□ -1.95
MSL3-217ENST00000494268 ARHGAP32A7KAX9 2087 aa2.9□□□□□ -1.95
MSL3-217ENST00000494268 LYNX1G3V0Z9 82 aa2.9□□□□□ -1.95
MSL3-217ENST00000494268 NDUFA4O00483 81 aa2.9□□□□□ -1.95
MSL3-217ENST00000494268 NCR3O14931 201 aa2.9□□□□□ -1.95
MSL3-217ENST00000494268 NDUFA1O15239 70 aa2.9□□□□□ -1.95
MSL3-217ENST00000494268 LYNX1P0DP58 116 aa2.9□□□□□ -1.95
MSL3-217ENST00000494268 ERHP84090 104 aaKnown RBP2.9□□□□□ -1.95
MSL3-217ENST00000494268 PRR9Q5T870 116 aa2.9□□□□□ -1.95
MSL3-217ENST00000494268 LINC00308Q8TCZ7 52 aa2.9□□□□□ -1.95
MSL3-217ENST00000494268 USF3Q68DE3 2245 aa2.9□□□□□ -1.95
MSL3-217ENST00000494268 SETXQ7Z333 2677 aaKnown RBP2.9□□□□□ -1.95
MSL3-217ENST00000494268 CR1P17927 2039 aa2.9□□□□□ -1.95
MSL3-217ENST00000494268 ETDCA0A1B0GVM5 59 aa2.89□□□□□ -1.95
MSL3-217ENST00000494268 IGKV2-29A2NJV5 120 aaPredicted RBP2.89□□□□□ -1.95
MSL3-217ENST00000494268 UQCR11O14957 56 aa2.89□□□□□ -1.95
MSL3-217ENST00000494268 IGKV4-1P06312 121 aa2.89□□□□□ -1.95
MSL3-217ENST00000494268 MGPP08493 103 aa2.89□□□□□ -1.95
MSL3-217ENST00000494268 CRIP1P50238 77 aa2.89□□□□□ -1.95
MSL3-217ENST00000494268 CCDC168Q8NDH2 2452 aa2.89□□□□□ -1.95
MSL3-217ENST00000494268 RNF5Q99942 180 aa2.89□□□□□ -1.95
MSL3-217ENST00000494268 PDZD2O15018 2839 aa2.89□□□□□ -1.95
MSL3-217ENST00000494268 VPS13CQ709C8 3753 aa2.88□□□□□ -1.95
MSL3-217ENST00000494268 CREBBPQ92793 2442 aa2.88□□□□□ -1.95
MSL3-217ENST00000494268 CSMD2Q7Z408 3487 aa2.88□□□□□ -1.95
MSL3-217ENST00000494268 IGKV3-7A0A075B6H7 116 aa2.88□□□□□ -1.95
MSL3-217ENST00000494268 IGHV3-64A0A075B6Q5 118 aa2.88□□□□□ -1.95
MSL3-217ENST00000494268 CCL3L1P16619 93 aa2.88□□□□□ -1.95
MSL3-217ENST00000494268 HAMPP81172 84 aa2.88□□□□□ -1.95
MSL3-217ENST00000494268 C9orf163Q8N9P6 203 aa2.88□□□□□ -1.95
MSL3-217ENST00000494268 GAFA1Q96PS6 74 aa2.88□□□□□ -1.95
MSL3-217ENST00000494268 CCL19Q99731 98 aa2.88□□□□□ -1.95
MSL3-217ENST00000494268 ABCA2Q9BZC7 2435 aa2.88□□□□□ -1.95
MSL3-217ENST00000494268 UNC79Q9P2D8 2635 aa2.88□□□□□ -1.95
MSL3-217ENST00000494268 NAV2Q8IVL1 2488 aa2.87□□□□□ -1.95
MSL3-217ENST00000494268 CELSR1Q9NYQ6 3014 aa2.87□□□□□ -1.95
MSL3-217ENST00000494268 TRGV2A0A075B6R0 118 aa2.87□□□□□ -1.95
MSL3-217ENST00000494268 WNK2Q9Y3S1 2297 aa2.87□□□□□ -1.95
MSL3-217ENST00000494268 MED13LQ71F56 2210 aa2.87□□□□□ -1.95
MSL3-217ENST00000494268 MALRD1Q5VYJ5 2156 aa2.86□□□□□ -1.95
MSL3-217ENST00000494268 TRGV4A0A0C4DH28 118 aa2.86□□□□□ -1.95
MSL3-217ENST00000494268 LINC00959A0A1B0GUT2 108 aa2.86□□□□□ -1.95
MSL3-217ENST00000494268 COA5Q86WW8 74 aa2.86□□□□□ -1.95
MSL3-217ENST00000494268 CSPG4Q6UVK1 2322 aa2.86□□□□□ -1.95
MSL3-217ENST00000494268 ZANQ9Y493 2812 aa2.86□□□□□ -1.95
MSL3-217ENST00000494268 AKAP9Q99996 3911 aa2.85□□□□□ -1.95
MSL3-217ENST00000494268 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.85□□□□□ -1.955e-6■□□□□ 9.7
MSL3-217ENST00000494268 PRB3Q04118 309 aaPredicted RBP2.85□□□□□ -1.95
MSL3-217ENST00000494268 ACANP16112 2415 aa2.85□□□□□ -1.95
MSL3-217ENST00000494268 TEX15Q9BXT5 2789 aa2.84□□□□□ -1.95
MSL3-217ENST00000494268 PIGYQ3MUY2 71 aa2.84□□□□□ -1.95
MSL3-217ENST00000494268 DEFB108BQ8NET1 73 aa2.84□□□□□ -1.95
MSL3-217ENST00000494268 ZNF469Q96JG9 3925 aaPredicted RBP2.84□□□□□ -1.95
MSL3-217ENST00000494268 MYO9AB2RTY4 2548 aa2.84□□□□□ -1.96
MSL3-217ENST00000494268 MAST4O15021 2626 aa2.84□□□□□ -1.96
MSL3-217ENST00000494268 TEP1Q99973 2627 aaKnown RBP2.84□□□□□ -1.96
MSL3-217ENST00000494268 ITPR3Q14573 2671 aa2.83□□□□□ -1.96
MSL3-217ENST00000494268 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.83□□□□□ -1.96
MSL3-217ENST00000494268 A0A1B0GU33 70 aa2.83□□□□□ -1.96
MSL3-217ENST00000494268 POLR2KP53803 58 aaKnown RBP2.83□□□□□ -1.96
MSL3-217ENST00000494268 Q6ZTI0 123 aa2.83□□□□□ -1.96
MSL3-217ENST00000494268 FLNAP21333 2647 aaKnown RBP2.82□□□□□ -1.96
MSL3-217ENST00000494268 A0A096LNT2 108 aa2.82□□□□□ -1.96
MSL3-217ENST00000494268 IGKV3OR2-268A0A0C4DH90 116 aa2.82□□□□□ -1.96
MSL3-217ENST00000494268 PRCDQ00LT1 54 aa2.82□□□□□ -1.96
MSL3-217ENST00000494268 DEFB112Q30KQ8 113 aa2.82□□□□□ -1.96
MSL3-217ENST00000494268 SMIM11BQ8TCY0 68 aa2.82□□□□□ -1.96
MSL3-217ENST00000494268 F8P00451 2351 aa2.82□□□□□ -1.96
MSL3-217ENST00000494268 MTORP42345 2549 aa2.82□□□□□ -1.96
MSL3-217ENST00000494268 ABCA1O95477 2261 aa2.81□□□□□ -1.96
MSL3-217ENST00000494268 OTOGQ6ZRI0 2925 aa2.81□□□□□ -1.96
MSL3-217ENST00000494268 MINOS1-NBL1R4GNA1 71 aa2.81□□□□□ -1.96
MSL3-217ENST00000494268 MXRA5Q9NR99 2828 aa2.81□□□□□ -1.96
MSL3-217ENST00000494268 HIVEP1P15822 2718 aa2.8□□□□□ -1.96
MSL3-217ENST00000494268 SONP18583 2426 aaKnown RBP2.8□□□□□ -1.96
MSL3-217ENST00000494268 TRBV6-4A0A1B0GX49 114 aa2.8□□□□□ -1.96
MSL3-217ENST00000494268 FN1P02751 2386 aaKnown RBP2.8□□□□□ -1.96
MSL3-217ENST00000494268 TNCP24821 2201 aa2.8□□□□□ -1.96
MSL3-217ENST00000494268 A0A087WTM6 91 aa2.79□□□□□ -1.96
MSL3-217ENST00000494268 IGLV7-43P04211 117 aa2.79□□□□□ -1.96
MSL3-217ENST00000494268 COX17Q14061 63 aa2.79□□□□□ -1.96
MSL3-217ENST00000494268 LINC00472Q9H8W2 130 aa2.79□□□□□ -1.96
MSL3-217ENST00000494268 TLN2Q9Y4G6 2542 aa2.79□□□□□ -1.96
MSL3-217ENST00000494268 SVEP1Q4LDE5 3571 aa2.78□□□□□ -1.96
MSL3-217ENST00000494268 RNASE3P12724 160 aaKnown RBP2.78□□□□□ -1.96
MSL3-217ENST00000494268 COX7BP24311 80 aa2.78□□□□□ -1.96
MSL3-217ENST00000494268 SPINK9Q5DT21 86 aa2.78□□□□□ -1.96
MSL3-217ENST00000494268 JMJD1CQ15652 2540 aa2.78□□□□□ -1.96
MSL3-217ENST00000494268 HIVEP2P31629 2446 aa2.78□□□□□ -1.97
MSL3-217ENST00000494268 DEFB131BA0A096LNP1 70 aa2.77□□□□□ -1.97
MSL3-217ENST00000494268 BRD3OSQ6XYD6 125 aa2.77□□□□□ -1.97
MSL3-217ENST00000494268 C4orf3Q8WVX3 66 aa2.77□□□□□ -1.97
MSL3-217ENST00000494268 LEAP2Q969E1 77 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms