RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 NOP10Q9NPE3 64 aaKnown RBP2.06□□□□□ -2.08
LMBR1-218ENST00000486837 SPTBN1Q01082 2364 aaKnown RBP2.05□□□□□ -2.08
LMBR1-218ENST00000486837 TRIOBPQ9H2D6 2365 aa2.05□□□□□ -2.08
LMBR1-218ENST00000486837 C10orf95Q9H7T3 257 aa2.05□□□□□ -2.08
LMBR1-218ENST00000486837 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.05□□□□□ -2.08
LMBR1-218ENST00000486837 FBN1P35555 2871 aaKnown RBP2.04□□□□□ -2.08
LMBR1-218ENST00000486837 INE1O15225 51 aa2.04□□□□□ -2.08
LMBR1-218ENST00000486837 RPL37P61927 97 aaKnown RBP2.04□□□□□ -2.08
LMBR1-218ENST00000486837 U3KQA8 63 aa2.04□□□□□ -2.08
LMBR1-218ENST00000486837 BAHCC1Q9P281 2608 aa2.04□□□□□ -2.08
LMBR1-218ENST00000486837 LELP1Q5T871 98 aa2.03□□□□□ -2.08
LMBR1-218ENST00000486837 CNOT1A5YKK6 2376 aaKnown RBP2.02□□□□□ -2.09
LMBR1-218ENST00000486837 DEFB103AP81534 67 aa2.02□□□□□ -2.09
LMBR1-218ENST00000486837 PRO0255Q9UI72 69 aa2.02□□□□□ -2.09
LMBR1-218ENST00000486837 DEFB136Q30KP8 78 aa2.01□□□□□ -2.09
LMBR1-218ENST00000486837 CEP350Q5VT06 3117 aa2.01□□□□□ -2.09
LMBR1-218ENST00000486837 MGAQ8IWI9 3026 aa1.99□□□□□ -2.09
LMBR1-218ENST00000486837 WDR87Q6ZQQ6 2873 aa1.99□□□□□ -2.09
LMBR1-218ENST00000486837 C10orf99Q6UWK7 81 aa1.99□□□□□ -2.09
LMBR1-218ENST00000486837 COL6A6A6NMZ7 2263 aa1.99□□□□□ -2.09
LMBR1-218ENST00000486837 FLG2Q5D862 2391 aaPredicted RBP1.98□□□□□ -2.09
LMBR1-218ENST00000486837 SRCAPQ6ZRS2 3230 aa1.98□□□□□ -2.09
LMBR1-218ENST00000486837 PRLHP81277 87 aa1.98□□□□□ -2.09
LMBR1-218ENST00000486837 CACNA1EQ15878 2313 aa1.98□□□□□ -2.09
LMBR1-218ENST00000486837 DEFB123Q8N688 67 aa1.97□□□□□ -2.09
LMBR1-218ENST00000486837 CACNA1BQ00975 2339 aa1.97□□□□□ -2.09
LMBR1-218ENST00000486837 KRTAP13-4Q3LI77 160 aa1.96□□□□□ -2.1
LMBR1-218ENST00000486837 IGF2RP11717 2491 aa1.96□□□□□ -2.1
LMBR1-218ENST00000486837 SPINK1P00995 79 aa1.95□□□□□ -2.1
LMBR1-218ENST00000486837 TPRP12270 2363 aaKnown RBP1.94□□□□□ -2.1
LMBR1-218ENST00000486837 CHD7Q9P2D1 2997 aa1.94□□□□□ -2.1
LMBR1-218ENST00000486837 PCNX1Q96RV3 2341 aa1.94□□□□□ -2.1
LMBR1-218ENST00000486837 A0A096LPF7 62 aa1.94□□□□□ -2.1
LMBR1-218ENST00000486837 UBE2DNLQ8IWF7 75 aa1.94□□□□□ -2.1
LMBR1-218ENST00000486837 CENPFP49454 3210 aa1.93□□□□□ -2.1
LMBR1-218ENST00000486837 J3QKU1 62 aa1.93□□□□□ -2.1
LMBR1-218ENST00000486837 S4R3F8 94 aa1.93□□□□□ -2.1
LMBR1-218ENST00000486837 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
LMBR1-218ENST00000486837 SPTBN2O15020 2390 aa1.92□□□□□ -2.1
LMBR1-218ENST00000486837 ZDBF2Q9HCK1 2354 aa1.91□□□□□ -2.1
LMBR1-218ENST00000486837 GOLGB1Q14789 3259 aaKnown RBP1.91□□□□□ -2.1
LMBR1-218ENST00000486837 PCNTO95613 3336 aa1.9□□□□□ -2.1
LMBR1-218ENST00000486837 PKDREJQ9NTG1 2253 aa1.89□□□□□ -2.11
LMBR1-218ENST00000486837 ACACAQ13085 2346 aa1.89□□□□□ -2.11
LMBR1-218ENST00000486837 ZZEF1O43149 2961 aa1.89□□□□□ -2.11
LMBR1-218ENST00000486837 CFAP54Q96N23 3096 aa1.88□□□□□ -2.11
LMBR1-218ENST00000486837 AKAP6Q13023 2319 aa1.88□□□□□ -2.11
LMBR1-218ENST00000486837 A0A096LNI7 61 aa1.88□□□□□ -2.11
LMBR1-218ENST00000486837 CEP250Q9BV73 2442 aa1.88□□□□□ -2.11
LMBR1-218ENST00000486837 H3BNG1 76 aa1.87□□□□□ -2.11
LMBR1-218ENST00000486837 KRTAP12-1P59990 96 aa1.87□□□□□ -2.11
LMBR1-218ENST00000486837 APLNQ9ULZ1 77 aa1.87□□□□□ -2.11
LMBR1-218ENST00000486837 TENM2Q9NT68 2774 aa1.87□□□□□ -2.11
LMBR1-218ENST00000486837 PTPRZ1P23471 2315 aaPredicted RBP1.86□□□□□ -2.11
LMBR1-218ENST00000486837 LINC01556Q5JQF7 62 aa1.86□□□□□ -2.11
LMBR1-218ENST00000486837 TNRC18O15417 2968 aaPredicted RBP1.85□□□□□ -2.11
LMBR1-218ENST00000486837 SPTA1P02549 2419 aa1.85□□□□□ -2.11
LMBR1-218ENST00000486837 OTOGQ6ZRI0 2925 aa1.85□□□□□ -2.11
LMBR1-218ENST00000486837 SZT2Q5T011 3432 aa1.85□□□□□ -2.11
LMBR1-218ENST00000486837 APC2O95996 2303 aa1.84□□□□□ -2.11
LMBR1-218ENST00000486837 FAM186AA6NE01 2351 aa1.84□□□□□ -2.11
LMBR1-218ENST00000486837 A0A0D9SG42 100 aa1.84□□□□□ -2.11
LMBR1-218ENST00000486837 VPS13AQ96RL7 3174 aa1.84□□□□□ -2.12
LMBR1-218ENST00000486837 UTRNP46939 3433 aa1.84□□□□□ -2.12
LMBR1-218ENST00000486837 CFAP47Q6ZTR5 3102 aa1.84□□□□□ -2.12
LMBR1-218ENST00000486837 SPINK6Q6UWN8 80 aa1.83□□□□□ -2.12
LMBR1-218ENST00000486837 CHD6Q8TD26 2715 aa1.83□□□□□ -2.12
LMBR1-218ENST00000486837 NBEAQ8NFP9 2946 aa1.83□□□□□ -2.12
LMBR1-218ENST00000486837 MAP1BP46821 2468 aaKnown RBP1.82□□□□□ -2.12
LMBR1-218ENST00000486837 DEFB124Q8NES8 71 aa1.82□□□□□ -2.12
LMBR1-218ENST00000486837 RANBP2P49792 3224 aaKnown RBP1.82□□□□□ -2.12
LMBR1-218ENST00000486837 VPS13DQ5THJ4 4388 aa1.82□□□□□ -2.12
LMBR1-218ENST00000486837 SPTBN4Q9H254 2564 aa1.82□□□□□ -2.12
LMBR1-218ENST00000486837 PRUNE2Q8WUY3 3088 aa1.82□□□□□ -2.12
LMBR1-218ENST00000486837 MKI67P46013 3256 aaKnown RBP1.81□□□□□ -2.12
LMBR1-218ENST00000486837 SPART-AS1P0CW21 52 aa1.81□□□□□ -2.12
LMBR1-218ENST00000486837 C2CD3Q4AC94 2353 aa1.81□□□□□ -2.12
LMBR1-218ENST00000486837 ASH1LQ9NR48 2969 aaKnown RBP1.8□□□□□ -2.12
LMBR1-218ENST00000486837 WDFY4Q6ZS81 3184 aa1.8□□□□□ -2.12
LMBR1-218ENST00000486837 FRYLO94915 3013 aa1.79□□□□□ -2.12
LMBR1-218ENST00000486837 PIEZO2Q9H5I5 2752 aa1.78□□□□□ -2.12
LMBR1-218ENST00000486837 GVINP1Q7Z2Y8 2422 aa1.78□□□□□ -2.12
LMBR1-218ENST00000486837 NCOR1O75376 2440 aa1.78□□□□□ -2.12
LMBR1-218ENST00000486837 UNC80Q8N2C7 3258 aa1.78□□□□□ -2.13
LMBR1-218ENST00000486837 OTOGLQ3ZCN5 2332 aa1.77□□□□□ -2.13
LMBR1-218ENST00000486837 HTN3P15516 51 aa1.77□□□□□ -2.13
LMBR1-218ENST00000486837 CELSR2Q9HCU4 2923 aa1.77□□□□□ -2.13
LMBR1-218ENST00000486837 EP300Q09472 2414 aaPredicted RBP1.77□□□□□ -2.13
LMBR1-218ENST00000486837 M0QZ58 72 aa1.76□□□□□ -2.13
LMBR1-218ENST00000486837 KRTAP21-3Q3LHN1 58 aa1.76□□□□□ -2.13
LMBR1-218ENST00000486837 Q5VSD8 79 aa1.76□□□□□ -2.13
LMBR1-218ENST00000486837 CACNA1HO95180 2353 aa1.76□□□□□ -2.13
LMBR1-218ENST00000486837 ROS1P08922 2347 aa1.75□□□□□ -2.13
LMBR1-218ENST00000486837 FAM208BQ5VWN6 2430 aa1.75□□□□□ -2.13
LMBR1-218ENST00000486837 BOD1L1Q8NFC6 3051 aa1.74□□□□□ -2.13
LMBR1-218ENST00000486837 ITPR1Q14643 2758 aa1.74□□□□□ -2.13
LMBR1-218ENST00000486837 DEFB4AO15263 64 aa1.74□□□□□ -2.13
LMBR1-218ENST00000486837 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
LMBR1-218ENST00000486837 DSPP15924 2871 aaKnown RBP1.74□□□□□ -2.13
LMBR1-218ENST00000486837 DCHS1Q96JQ0 3298 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms