RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 WDFY3Q8IZQ1 3526 aa1.94□□□□□ -2.1
FXN-204ENST00000484259 ITPR2Q14571 2701 aa1.93□□□□□ -2.1
FXN-204ENST00000484259 IGKV2D-24A0A075B6R9 120 aa1.93□□□□□ -2.1
FXN-204ENST00000484259 H3BRN7 92 aa1.93□□□□□ -2.1
FXN-204ENST00000484259 LINC00315P59091 139 aa1.93□□□□□ -2.1
FXN-204ENST00000484259 FXYD4P59646 89 aa1.93□□□□□ -2.1
FXN-204ENST00000484259 CCL19Q99731 98 aa1.93□□□□□ -2.1
FXN-204ENST00000484259 POLQO75417 2590 aa1.93□□□□□ -2.1
FXN-204ENST00000484259 RTTNQ86VV8 2226 aa1.93□□□□□ -2.1
FXN-204ENST00000484259 PRR14LQ5THK1 2151 aa1.92□□□□□ -2.1
FXN-204ENST00000484259 F8P00451 2351 aa1.92□□□□□ -2.1
FXN-204ENST00000484259 DEFB108AA8MXU0 73 aa1.92□□□□□ -2.1
FXN-204ENST00000484259 Q6ZQY7 126 aa1.92□□□□□ -2.1
FXN-204ENST00000484259 USF3Q68DE3 2245 aa1.92□□□□□ -2.1
FXN-204ENST00000484259 MED13LQ71F56 2210 aa1.92□□□□□ -2.1
FXN-204ENST00000484259 PRRC2AP48634 2157 aaKnown RBP1.92□□□□□ -2.1
FXN-204ENST00000484259 PIN1P1O15428 100 aa1.91□□□□□ -2.1
FXN-204ENST00000484259 ANAPC11Q9NYG5 84 aa1.91□□□□□ -2.1
FXN-204ENST00000484259 HIVEP2P31629 2446 aa1.91□□□□□ -2.1
FXN-204ENST00000484259 SMG1Q96Q15 3661 aaKnown RBP1.91□□□□□ -2.1
FXN-204ENST00000484259 NAV3Q8IVL0 2385 aa1.91□□□□□ -2.1
FXN-204ENST00000484259 ACANP16112 2415 aa1.9□□□□□ -2.1
FXN-204ENST00000484259 CSPG4Q6UVK1 2322 aa1.9□□□□□ -2.1
FXN-204ENST00000484259 ITPR3Q14573 2671 aa1.9□□□□□ -2.1
FXN-204ENST00000484259 C2CD3Q4AC94 2353 aa1.9□□□□□ -2.11
FXN-204ENST00000484259 APCP25054 2843 aa1.9□□□□□ -2.11
FXN-204ENST00000484259 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.9□□□□□ -2.11
FXN-204ENST00000484259 ABCA1O95477 2261 aa1.9□□□□□ -2.11
FXN-204ENST00000484259 ARFGEF3Q5TH69 2177 aa1.9□□□□□ -2.11
FXN-204ENST00000484259 COL12A1Q99715 3063 aa1.9□□□□□ -2.11
FXN-204ENST00000484259 MTORP42345 2549 aa1.9□□□□□ -2.11
FXN-204ENST00000484259 TEX15Q9BXT5 2789 aa1.9□□□□□ -2.11
FXN-204ENST00000484259 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.9□□□□□ -2.112e-15■■■■■ 31
FXN-204ENST00000484259 ZFHX3Q15911 3703 aa1.9□□□□□ -2.11
FXN-204ENST00000484259 TLN2Q9Y4G6 2542 aa1.89□□□□□ -2.11
FXN-204ENST00000484259 UTP20O75691 2785 aaKnown RBP1.89□□□□□ -2.11
FXN-204ENST00000484259 ARHGAP32A7KAX9 2087 aa1.89□□□□□ -2.11
FXN-204ENST00000484259 DEFB131BA0A096LNP1 70 aa1.89□□□□□ -2.11
FXN-204ENST00000484259 SMIM11BQ8TCY0 68 aa1.89□□□□□ -2.11
FXN-204ENST00000484259 FLNAP21333 2647 aaKnown RBP1.88□□□□□ -2.11
FXN-204ENST00000484259 TEP1Q99973 2627 aaKnown RBP1.88□□□□□ -2.11
FXN-204ENST00000484259 WNK2Q9Y3S1 2297 aa1.88□□□□□ -2.11
FXN-204ENST00000484259 IGKV2-28A0A075B6P5 120 aa1.88□□□□□ -2.11
FXN-204ENST00000484259 LY6G6CO95867 125 aa1.88□□□□□ -2.11
FXN-204ENST00000484259 IGKV2D-28P01615 120 aa1.88□□□□□ -2.11
FXN-204ENST00000484259 C10orf99Q6UWK7 81 aa1.88□□□□□ -2.11
FXN-204ENST00000484259 ABCA2Q9BZC7 2435 aa1.88□□□□□ -2.11
FXN-204ENST00000484259 SETD2Q9BYW2 2564 aaPredicted RBP1.88□□□□□ -2.11
FXN-204ENST00000484259 RELNP78509 3460 aa1.87□□□□□ -2.11
FXN-204ENST00000484259 CELSR2Q9HCU4 2923 aa1.87□□□□□ -2.11
FXN-204ENST00000484259 JMJD1CQ15652 2540 aa1.87□□□□□ -2.11
FXN-204ENST00000484259 SONP18583 2426 aaKnown RBP1.87□□□□□ -2.11
FXN-204ENST00000484259 BSNQ9UPA5 3926 aa1.87□□□□□ -2.11
FXN-204ENST00000484259 SMIM2Q9BVW6 85 aa1.87□□□□□ -2.11
FXN-204ENST00000484259 HIVEP1P15822 2718 aa1.87□□□□□ -2.11
FXN-204ENST00000484259 CRYBG3Q68DQ2 2970 aa1.86□□□□□ -2.11
FXN-204ENST00000484259 PDZD2O15018 2839 aa1.86□□□□□ -2.11
FXN-204ENST00000484259 IGKV2-24A0A0C4DH68 120 aa1.86□□□□□ -2.11
FXN-204ENST00000484259 KRTAP21-3Q3LHN1 58 aa1.86□□□□□ -2.11
FXN-204ENST00000484259 LINC01590Q5TEZ4 76 aa1.86□□□□□ -2.11
FXN-204ENST00000484259 Q6ZRX8 168 aa1.86□□□□□ -2.11
FXN-204ENST00000484259 LRBAP50851 2863 aa1.86□□□□□ -2.11
FXN-204ENST00000484259 ADGRG4Q8IZF6 3080 aa1.85□□□□□ -2.11
FXN-204ENST00000484259 TACC2O95359 2948 aa1.85□□□□□ -2.11
FXN-204ENST00000484259 MAP1AP78559 2803 aaPredicted RBP1.85□□□□□ -2.11
FXN-204ENST00000484259 LYNX1G3V0Z9 82 aa1.85□□□□□ -2.11
FXN-204ENST00000484259 G3V318 75 aa1.85□□□□□ -2.11
FXN-204ENST00000484259 ANGP03950 147 aaKnown RBP1.85□□□□□ -2.11
FXN-204ENST00000484259 LYNX1P0DP58 116 aa1.85□□□□□ -2.11
FXN-204ENST00000484259 RPS27P42677 84 aaKnown RBP1.85□□□□□ -2.11
FXN-204ENST00000484259 DSCR10P59022 87 aa1.85□□□□□ -2.11
FXN-204ENST00000484259 PRR9Q5T870 116 aa1.85□□□□□ -2.11
FXN-204ENST00000484259 PP632Q6XCG6 107 aa1.85□□□□□ -2.11
FXN-204ENST00000484259 SSBP3-AS1Q7Z2R9 100 aa1.85□□□□□ -2.11
FXN-204ENST00000484259 PLAC4Q8WY50 150 aa1.85□□□□□ -2.11
FXN-204ENST00000484259 SMR3AQ99954 134 aa1.85□□□□□ -2.11
FXN-204ENST00000484259 CNFNQ9BYD5 112 aa1.85□□□□□ -2.11
FXN-204ENST00000484259 KAAG1Q9UBP8 84 aa1.85□□□□□ -2.11
FXN-204ENST00000484259 NSD1Q96L73 2696 aaPredicted RBP1.85□□□□□ -2.11
FXN-204ENST00000484259 OBSCNQ5VST9 7968 aa1.84□□□□□ -2.11
FXN-204ENST00000484259 FN1P02751 2386 aaKnown RBP1.84□□□□□ -2.11
FXN-204ENST00000484259 HRNRQ86YZ3 2850 aaPredicted RBP1.84□□□□□ -2.11
FXN-204ENST00000484259 A0A096LNT2 108 aa1.84□□□□□ -2.11
FXN-204ENST00000484259 KRTAP13-2Q52LG2 175 aa1.84□□□□□ -2.11
FXN-204ENST00000484259 DEFB108BQ8NET1 73 aa1.84□□□□□ -2.11
FXN-204ENST00000484259 DCHS2Q6V1P9 2916 aa1.84□□□□□ -2.11
FXN-204ENST00000484259 ATRQ13535 2644 aa1.84□□□□□ -2.12
FXN-204ENST00000484259 OTOGQ6ZRI0 2925 aa1.84□□□□□ -2.12
FXN-204ENST00000484259 FBN2P35556 2912 aa1.83□□□□□ -2.12
FXN-204ENST00000484259 GVQW2A0A096LPI5 108 aaPredicted RBP1.83□□□□□ -2.12
FXN-204ENST00000484259 LINC00158P58513 81 aa1.83□□□□□ -2.12
FXN-204ENST00000484259 LINC00308Q8TCZ7 52 aa1.83□□□□□ -2.12
FXN-204ENST00000484259 KRTAP4-3Q9BYR4 195 aa1.83□□□□□ -2.12
FXN-204ENST00000484259 TTTY10Q9BZA0 68 aa1.83□□□□□ -2.12
FXN-204ENST00000484259 COL6A5A8TX70 2615 aa1.83□□□□□ -2.12
FXN-204ENST00000484259 NDUFA1O15239 70 aa1.82□□□□□ -2.12
FXN-204ENST00000484259 PRB2P02812 416 aaPredicted RBP1.82□□□□□ -2.12
FXN-204ENST00000484259 Q6ZRN7 208 aaPredicted RBP1.82□□□□□ -2.12
FXN-204ENST00000484259 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
FXN-204ENST00000484259 SPENQ96T58 3664 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms