RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 CACNA1BQ00975 2339 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 NOTCH3Q9UM47 2321 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 DNAH5Q8TE73 4624 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 CNOT1A5YKK6 2376 aaKnown RBP0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 TPRP12270 2363 aaKnown RBP0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 WNK1Q9H4A3 2382 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 SPART-AS1P0CW21 52 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 KRTAP12-2P59991 146 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 KRTAP13-4Q3LI77 160 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 LINC01556Q5JQF7 62 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 XP32Q5T750 250 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 KRTAP7-1Q8IUC3 87 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 PTPRZ1P23471 2315 aaPredicted RBP0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 TRRAPQ9Y4A5 3859 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 BRCA2P51587 3418 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 LAMA2P24043 3122 aaKnown RBP0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 PLECQ15149 4684 aaKnown RBP0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 RELNP78509 3460 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 TRIOO75962 3097 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 BOD1L1Q8NFC6 3051 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 DNAH7Q8WXX0 4024 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 FAT3Q8TDW7 4589 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 IGF2RP11717 2491 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 DMXL1Q9Y485 3027 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 DNAH3Q8TD57 4116 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 SPTBN2O15020 2390 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 LCE2CQ5TA81 110 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 DEFB123Q8N688 67 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 KRTAP3-1Q9BYR8 98 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 PRKDCP78527 4128 aaKnown RBP0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 LOC400499M0QZD8 3231 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 AKAP6Q13023 2319 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 PCNX1Q96RV3 2341 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 ANKRD17O75179 2603 aaKnown RBP0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 DNAH6Q9C0G6 4158 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 CEP250Q9BV73 2442 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 VPS13CQ709C8 3753 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 DYNC1H1Q14204 4646 aaKnown RBP0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 DNAH12Q6ZR08 3092 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 CHD6Q8TD26 2715 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 GPR179Q6PRD1 2367 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 LAMA3Q16787 3333 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 ACACAQ13085 2346 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 ASH1LQ9NR48 2969 aaKnown RBP0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 TENM2Q9NT68 2774 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 CELSR2Q9HCU4 2923 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 PKDREJQ9NTG1 2253 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 C9orf92A6NGG3 77 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 LORP23490 312 aaPredicted RBP0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 KRTAP12-1P59990 96 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 KRTAP19-4Q3LI73 84 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 LCE2AQ5TA79 106 aaPredicted RBP0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 MAPK1IP1LQ8NDC0 245 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 CELSR1Q9NYQ6 3014 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 EP400Q96L91 3159 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 F8P00451 2351 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 CSMD3Q7Z407 3707 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 CSPG4Q6UVK1 2322 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 NBEAQ8NFP9 2946 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 COL12A1Q99715 3063 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 VCANP13611 3396 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 FREM2Q5SZK8 3169 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 CUBNO60494 3623 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 PKD1P98161 4303 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 VPS13BQ7Z7G8 4022 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 CRYBG3Q68DQ2 2970 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 OTOGQ6ZRI0 2925 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 PKHD1L1Q86WI1 4243 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 HECTD4Q9Y4D8 3996 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 M0QZ58 72 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 LCE2BO14633 110 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 KALRNO60229 2985 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 KRTAP10-6P60371 365 aaPredicted RBP0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 DEFB124Q8NES8 71 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 FRYQ5TBA9 3013 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 DMXL2Q8TDJ6 3036 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 OTOGLQ3ZCN5 2332 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 HTTP42858 3142 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 MYO15AQ9UKN7 3530 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 NCOR1O75376 2440 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 LAMA1P25391 3075 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 ASPMQ8IZT6 3477 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 C2CD3Q4AC94 2353 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 ZNF469Q96JG9 3925 aaPredicted RBP0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 APC2O95996 2303 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 HSPG2P98160 4391 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 ATMQ13315 3056 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 SPTA1P02549 2419 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 HIVEP2P31629 2446 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 H3BNG1 76 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 KRTAP13-2Q52LG2 175 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 KRTAP13-1Q8IUC0 172 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 PIEZO2Q9H5I5 2752 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 DSPP15924 2871 aaKnown RBP0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 PRRC2CQ9Y520 2896 aaKnown RBP0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 KMT2AQ03164 3969 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 MAP1BP46821 2468 aaKnown RBP0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 SPTBN4Q9H254 2564 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 CDH23Q9H251 3354 aa0.4□□□□□ -2.34
RPL39P28-201ENST00000465655 FAT1Q14517 4588 aa0.4□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms