RNA–Protein interactions for RNA: ENST00000441719.5

KDM3A-205, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 8,741 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-205ENST00000441719 Q75L30 129 aa6.38□□□□□ -1.39
KDM3A-205ENST00000441719 MKI67P46013 3256 aaKnown RBP6.38□□□□□ -1.39
KDM3A-205ENST00000441719 LINC01558Q9Y6Z2 57 aa6.37□□□□□ -1.39
KDM3A-205ENST00000441719 CYSTM1Q9H1C7 97 aa6.36□□□□□ -1.39
KDM3A-205ENST00000441719 HTTP42858 3142 aa6.34□□□□□ -1.39
KDM3A-205ENST00000441719 MGAM2Q2M2H8 2515 aa6.33□□□□□ -1.4
KDM3A-205ENST00000441719 ITPR3Q14573 2671 aa6.32□□□□□ -1.4
KDM3A-205ENST00000441719 FLNAP21333 2647 aaKnown RBP6.32□□□□□ -1.4
KDM3A-205ENST00000441719 A0A087X002 238 aa6.32□□□□□ -1.4
KDM3A-205ENST00000441719 PRRC2CQ9Y520 2896 aaKnown RBP6.31□□□□□ -1.4
KDM3A-205ENST00000441719 Q6ZR54 194 aa6.3□□□□□ -1.4
KDM3A-205ENST00000441719 USP24Q9UPU5 2620 aa6.3□□□□□ -1.4
KDM3A-205ENST00000441719 PRAC1Q96KF2 57 aa6.3□□□□□ -1.4
KDM3A-205ENST00000441719 M0QZ58 72 aa6.29□□□□□ -1.4
KDM3A-205ENST00000441719 CHD9Q3L8U1 2897 aa6.29□□□□□ -1.4
KDM3A-205ENST00000441719 OXTP01178 125 aa6.27□□□□□ -1.4
KDM3A-205ENST00000441719 FLNBO75369 2602 aaKnown RBP6.27□□□□□ -1.41
KDM3A-205ENST00000441719 Q5VV11 94 aa6.27□□□□□ -1.41
KDM3A-205ENST00000441719 ADM2Q7Z4H4 148 aa6.27□□□□□ -1.41
KDM3A-205ENST00000441719 FP248Q71RG6 208 aaPredicted RBP6.26□□□□□ -1.41
KDM3A-205ENST00000441719 Q5XG85 94 aa6.26□□□□□ -1.41
KDM3A-205ENST00000441719 KRTAP4-16G5E9R7 235 aaPredicted RBP6.25□□□□□ -1.41
KDM3A-205ENST00000441719 KRTAP11-1Q8IUC1 163 aa6.25□□□□□ -1.41
KDM3A-205ENST00000441719 LAMA3Q16787 3333 aa6.24□□□□□ -1.41
KDM3A-205ENST00000441719 H1FX-AS1Q4G0G2 97 aa6.23□□□□□ -1.41
KDM3A-205ENST00000441719 NOTCH2NLQ7Z3S9 236 aa6.22□□□□□ -1.41
KDM3A-205ENST00000441719 SPATA8Q6RVD6 105 aa6.22□□□□□ -1.41
KDM3A-205ENST00000441719 CFAP54Q96N23 3096 aa6.21□□□□□ -1.41
KDM3A-205ENST00000441719 HELZ2Q9BYK8 2649 aaKnown RBP6.21□□□□□ -1.42
KDM3A-205ENST00000441719 PLAC4Q8WY50 150 aa6.21□□□□□ -1.42
KDM3A-205ENST00000441719 RPL37P61927 97 aaKnown RBP6.21□□□□□ -1.42
KDM3A-205ENST00000441719 BRCA2P51587 3418 aa6.2□□□□□ -1.42
KDM3A-205ENST00000441719 RANBP2P49792 3224 aaKnown RBP6.19□□□□□ -1.42
KDM3A-205ENST00000441719 ATRQ13535 2644 aa6.18□□□□□ -1.42
KDM3A-205ENST00000441719 ROMO1P60602 79 aa6.17□□□□□ -1.42
KDM3A-205ENST00000441719 MGAQ8IWI9 3026 aa6.17□□□□□ -1.42
KDM3A-205ENST00000441719 Q6ZRN7 208 aaPredicted RBP6.17□□□□□ -1.42
KDM3A-205ENST00000441719 CFAP46Q8IYW2 2715 aa6.16□□□□□ -1.42
KDM3A-205ENST00000441719 KRTAP29-1A8MX34 341 aaPredicted RBP6.15□□□□□ -1.43
KDM3A-205ENST00000441719 KRTAP7-1Q8IUC3 87 aa6.13□□□□□ -1.43
KDM3A-205ENST00000441719 TRIOO75962 3097 aa6.13□□□□□ -1.43
KDM3A-205ENST00000441719 PRUNE2Q8WUY3 3088 aa6.13□□□□□ -1.43
KDM3A-205ENST00000441719 XIRP2A4UGR9 3374 aa6.1□□□□□ -1.43
KDM3A-205ENST00000441719 UNC80Q8N2C7 3258 aa6.09□□□□□ -1.43
KDM3A-205ENST00000441719 KRTAP13-2Q52LG2 175 aa6.09□□□□□ -1.43
KDM3A-205ENST00000441719 MAST4O15021 2626 aa6.09□□□□□ -1.43
KDM3A-205ENST00000441719 CDH23Q9H251 3354 aa6.09□□□□□ -1.43
KDM3A-205ENST00000441719 WDFY4Q6ZS81 3184 aa6.07□□□□□ -1.44
KDM3A-205ENST00000441719 A0A0C4DFX4 3053 aa6.07□□□□□ -1.44
KDM3A-205ENST00000441719 AKAP13Q12802 2813 aa6.06□□□□□ -1.44
KDM3A-205ENST00000441719 CELSR3Q9NYQ7 3312 aa6.06□□□□□ -1.44
KDM3A-205ENST00000441719 TRANK1O15050 2925 aa6.06□□□□□ -1.44
KDM3A-205ENST00000441719 LAMA2P24043 3122 aaKnown RBP6.05□□□□□ -1.44
KDM3A-205ENST00000441719 ASB16-AS1Q495Z4 193 aa6.05□□□□□ -1.44
KDM3A-205ENST00000441719 RPS29P62273 56 aaKnown RBP6.04□□□□□ -1.44
KDM3A-205ENST00000441719 A8MUU9 505 aa6.04□□□□□ -1.44
KDM3A-205ENST00000441719 A8MU10 97 aa6.03□□□□□ -1.44
KDM3A-205ENST00000441719 C20orf166-AS1Q96NR2 134 aa6.01□□□□□ -1.45
KDM3A-205ENST00000441719 A0A0A0MQY5 61 aa6□□□□□ -1.45
KDM3A-205ENST00000441719 KRTAP13-1Q8IUC0 172 aa6□□□□□ -1.45
KDM3A-205ENST00000441719 TEX15Q9BXT5 2789 aa5.98□□□□□ -1.45
KDM3A-205ENST00000441719 CHD6Q8TD26 2715 aa5.97□□□□□ -1.45
KDM3A-205ENST00000441719 DNAH14Q0VDD8 3507 aa5.96□□□□□ -1.46
KDM3A-205ENST00000441719 COL6A3P12111 3177 aa5.95□□□□□ -1.46
KDM3A-205ENST00000441719 SZT2Q5T011 3432 aa5.93□□□□□ -1.46
KDM3A-205ENST00000441719 H3BS24 57 aa5.93□□□□□ -1.46
KDM3A-205ENST00000441719 KRTAP21-3Q3LHN1 58 aa5.93□□□□□ -1.46
KDM3A-205ENST00000441719 TEP1Q99973 2627 aaKnown RBP5.9□□□□□ -1.46
KDM3A-205ENST00000441719 ZNF292O60281 2723 aa5.88□□□□□ -1.47
KDM3A-205ENST00000441719 CENPEQ02224 2701 aa5.87□□□□□ -1.47
KDM3A-205ENST00000441719 FRYQ5TBA9 3013 aa5.87□□□□□ -1.47
KDM3A-205ENST00000441719 VPS13AQ96RL7 3174 aa5.87□□□□□ -1.47
KDM3A-205ENST00000441719 A0A1B0GVY2 172 aa5.86□□□□□ -1.47
KDM3A-205ENST00000441719 FREM2Q5SZK8 3169 aa5.85□□□□□ -1.47
KDM3A-205ENST00000441719 STAB1Q9NY15 2570 aa5.84□□□□□ -1.47
KDM3A-205ENST00000441719 DSPP15924 2871 aaKnown RBP5.84□□□□□ -1.48
KDM3A-205ENST00000441719 BAHCC1Q9P281 2608 aa5.84□□□□□ -1.48
KDM3A-205ENST00000441719 NBEAL1Q6ZS30 2694 aa5.83□□□□□ -1.48
KDM3A-205ENST00000441719 VCANP13611 3396 aa5.83□□□□□ -1.48
KDM3A-205ENST00000441719 KRTAP25-1Q3LHN0 102 aa5.82□□□□□ -1.48
KDM3A-205ENST00000441719 NBEAL2Q6ZNJ1 2754 aa5.82□□□□□ -1.48
KDM3A-205ENST00000441719 IGSF10Q6WRI0 2623 aa5.81□□□□□ -1.48
KDM3A-205ENST00000441719 GCN1Q92616 2671 aaKnown RBP5.81□□□□□ -1.48
KDM3A-205ENST00000441719 COL6A5A8TX70 2615 aa5.8□□□□□ -1.48
KDM3A-205ENST00000441719 LAMA1P25391 3075 aa5.79□□□□□ -1.48
KDM3A-205ENST00000441719 TNP1P09430 55 aa5.78□□□□□ -1.48
KDM3A-205ENST00000441719 XP32Q5T750 250 aa5.77□□□□□ -1.49
KDM3A-205ENST00000441719 UNC79Q9P2D8 2635 aa5.77□□□□□ -1.49
KDM3A-205ENST00000441719 A6NN06 94 aa5.77□□□□□ -1.49
KDM3A-205ENST00000441719 KRTAP1-4P0C5Y4 121 aa5.76□□□□□ -1.49
KDM3A-205ENST00000441719 SETXQ7Z333 2677 aaKnown RBP5.76□□□□□ -1.49
KDM3A-205ENST00000441719 KALRNO60229 2985 aa5.75□□□□□ -1.49
KDM3A-205ENST00000441719 DMBT1Q9UGM3 2413 aaPredicted RBP5.74□□□□□ -1.49
KDM3A-205ENST00000441719 ITPR2Q14571 2701 aa5.73□□□□□ -1.49
KDM3A-205ENST00000441719 KRTAP10-8P60410 259 aa5.73□□□□□ -1.49
KDM3A-205ENST00000441719 CFAP47Q6ZTR5 3102 aa5.73□□□□□ -1.49
KDM3A-205ENST00000441719 SPTBN5Q9NRC6 3674 aaKnown RBP5.71□□□□□ -1.5
KDM3A-205ENST00000441719 LRBAP50851 2863 aa5.7□□□□□ -1.5
KDM3A-205ENST00000441719 C10orf95Q9H7T3 257 aa5.7□□□□□ -1.5
KDM3A-205ENST00000441719 ATMQ13315 3056 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms