RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 RYR1P21817 5038 aa1.57□□□□□ -2.16
HMGB1P12-201ENST00000438594 CRIP1P50238 77 aa1.57□□□□□ -2.16
HMGB1P12-201ENST00000438594 UBE2DNLQ8IWF7 75 aa1.57□□□□□ -2.16
HMGB1P12-201ENST00000438594 CRIPTQ9P021 101 aa1.57□□□□□ -2.16
HMGB1P12-201ENST00000438594 IGSF10Q6WRI0 2623 aa1.57□□□□□ -2.16
HMGB1P12-201ENST00000438594 CELSR3Q9NYQ7 3312 aa1.57□□□□□ -2.16
HMGB1P12-201ENST00000438594 ASPMQ8IZT6 3477 aa1.56□□□□□ -2.16
HMGB1P12-201ENST00000438594 BSNQ9UPA5 3926 aa1.56□□□□□ -2.16
HMGB1P12-201ENST00000438594 DEFB131BA0A096LNP1 70 aa1.56□□□□□ -2.16
HMGB1P12-201ENST00000438594 SPINK4O60575 86 aa1.56□□□□□ -2.16
HMGB1P12-201ENST00000438594 U3KQA8 63 aa1.56□□□□□ -2.16
HMGB1P12-201ENST00000438594 KRTAP12-1P59990 96 aa1.55□□□□□ -2.16
HMGB1P12-201ENST00000438594 TIMM8BQ9Y5J9 83 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P12-201ENST00000438594 ZFYVE26Q68DK2 2539 aa1.55□□□□□ -2.16
HMGB1P12-201ENST00000438594 FLNCQ14315 2725 aa1.54□□□□□ -2.16
HMGB1P12-201ENST00000438594 TRIOO75962 3097 aa1.54□□□□□ -2.16
HMGB1P12-201ENST00000438594 H0YGG7 62 aa1.54□□□□□ -2.16
HMGB1P12-201ENST00000438594 CRCT1Q9UGL9 99 aa1.54□□□□□ -2.16
HMGB1P12-201ENST00000438594 TENM4Q6N022 2769 aa1.54□□□□□ -2.16
HMGB1P12-201ENST00000438594 MACF1Q9UPN3 7388 aaKnown RBP1.53□□□□□ -2.16
HMGB1P12-201ENST00000438594 H0YGX0 51 aa1.53□□□□□ -2.16
HMGB1P12-201ENST00000438594 I3L2K1 104 aa1.53□□□□□ -2.16
HMGB1P12-201ENST00000438594 MRPL33O75394 65 aaKnown RBP1.53□□□□□ -2.16
HMGB1P12-201ENST00000438594 KRTAP10-10P60014 251 aa1.53□□□□□ -2.16
HMGB1P12-201ENST00000438594 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
HMGB1P12-201ENST00000438594 C2CD3Q4AC94 2353 aa1.53□□□□□ -2.16
HMGB1P12-201ENST00000438594 CACNA1HO95180 2353 aa1.52□□□□□ -2.17
HMGB1P12-201ENST00000438594 OTOGLQ3ZCN5 2332 aa1.52□□□□□ -2.17
HMGB1P12-201ENST00000438594 USP9YO00507 2555 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P12-201ENST00000438594 K7EIL1 84 aa1.52□□□□□ -2.17
HMGB1P12-201ENST00000438594 NDUFA3O95167 84 aa1.52□□□□□ -2.17
HMGB1P12-201ENST00000438594 SPG11Q96JI7 2443 aa1.52□□□□□ -2.17
HMGB1P12-201ENST00000438594 ZDBF2Q9HCK1 2354 aa1.52□□□□□ -2.17
HMGB1P12-201ENST00000438594 TTC28Q96AY4 2481 aa1.51□□□□□ -2.17
HMGB1P12-201ENST00000438594 LYNX1P0DP58 116 aa1.51□□□□□ -2.17
HMGB1P12-201ENST00000438594 DEFB110Q30KQ9 67 aa1.51□□□□□ -2.17
HMGB1P12-201ENST00000438594 CDKN2A-AS1Q9UH64 79 aa1.51□□□□□ -2.17
HMGB1P12-201ENST00000438594 FREM2Q5SZK8 3169 aa1.51□□□□□ -2.17
HMGB1P12-201ENST00000438594 LAMA1P25391 3075 aa1.51□□□□□ -2.17
HMGB1P12-201ENST00000438594 URB1O60287 2271 aaKnown RBP1.51□□□□□ -2.17
HMGB1P12-201ENST00000438594 CFAP54Q96N23 3096 aa1.51□□□□□ -2.17
HMGB1P12-201ENST00000438594 HIVEP2P31629 2446 aa1.5□□□□□ -2.17
HMGB1P12-201ENST00000438594 VPS13AQ96RL7 3174 aa1.5□□□□□ -2.17
HMGB1P12-201ENST00000438594 CEP295Q9C0D2 2601 aa1.5□□□□□ -2.17
HMGB1P12-201ENST00000438594 STATHP02808 62 aa1.5□□□□□ -2.17
HMGB1P12-201ENST00000438594 LINC00158P58513 81 aa1.5□□□□□ -2.17
HMGB1P12-201ENST00000438594 KRTAP6-3Q3LI67 103 aa1.5□□□□□ -2.17
HMGB1P12-201ENST00000438594 DEFB123Q8N688 67 aa1.5□□□□□ -2.17
HMGB1P12-201ENST00000438594 LAMA5O15230 3695 aa1.5□□□□□ -2.17
HMGB1P12-201ENST00000438594 CFAP47Q6ZTR5 3102 aa1.5□□□□□ -2.17
HMGB1P12-201ENST00000438594 LOC400499M0QZD8 3231 aa1.49□□□□□ -2.17
HMGB1P12-201ENST00000438594 GVINP1Q7Z2Y8 2422 aa1.49□□□□□ -2.17
HMGB1P12-201ENST00000438594 TENM1Q9UKZ4 2725 aa1.49□□□□□ -2.17
HMGB1P12-201ENST00000438594 KNL1Q8NG31 2342 aa1.49□□□□□ -2.17
HMGB1P12-201ENST00000438594 ATRQ13535 2644 aa1.49□□□□□ -2.17
HMGB1P12-201ENST00000438594 AHCTF1Q8WYP5 2266 aa1.49□□□□□ -2.17
HMGB1P12-201ENST00000438594 K7EQZ3 153 aa1.49□□□□□ -2.17
HMGB1P12-201ENST00000438594 TP53AIP1Q9HCN2 124 aa1.49□□□□□ -2.17
HMGB1P12-201ENST00000438594 DCHS1Q96JQ0 3298 aa1.49□□□□□ -2.17
HMGB1P12-201ENST00000438594 PDZD2O15018 2839 aa1.48□□□□□ -2.17
HMGB1P12-201ENST00000438594 DNHD1Q96M86 4753 aa1.48□□□□□ -2.17
HMGB1P12-201ENST00000438594 KNTC1P50748 2209 aa1.48□□□□□ -2.17
HMGB1P12-201ENST00000438594 GOLGA4Q13439 2230 aaKnown RBP1.48□□□□□ -2.17
HMGB1P12-201ENST00000438594 CFAP46Q8IYW2 2715 aa1.48□□□□□ -2.17
HMGB1P12-201ENST00000438594 FLG2Q5D862 2391 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P12-201ENST00000438594 RPS27P42677 84 aaKnown RBP1.48□□□□□ -2.17
HMGB1P12-201ENST00000438594 Q8IZM0 81 aa1.48□□□□□ -2.17
HMGB1P12-201ENST00000438594 MRPL34Q9BQ48 92 aaKnown RBP1.48□□□□□ -2.17
HMGB1P12-201ENST00000438594 RYR3Q15413 4870 aa1.48□□□□□ -2.17
HMGB1P12-201ENST00000438594 MUC6Q6W4X9 2439 aa1.47□□□□□ -2.17
HMGB1P12-201ENST00000438594 PKD1L1Q8TDX9 2849 aa1.47□□□□□ -2.17
HMGB1P12-201ENST00000438594 DEFB133Q30KQ1 61 aa1.47□□□□□ -2.17
HMGB1P12-201ENST00000438594 USMG5Q96IX5 58 aa1.47□□□□□ -2.17
HMGB1P12-201ENST00000438594 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.47□□□□□ -2.17
HMGB1P12-201ENST00000438594 MAP1BP46821 2468 aaKnown RBP1.47□□□□□ -2.17
HMGB1P12-201ENST00000438594 SMG1Q96Q15 3661 aaKnown RBP1.47□□□□□ -2.17
HMGB1P12-201ENST00000438594 NBEAL1Q6ZS30 2694 aa1.46□□□□□ -2.18
HMGB1P12-201ENST00000438594 FRYLO94915 3013 aa1.46□□□□□ -2.18
HMGB1P12-201ENST00000438594 HIVEP3Q5T1R4 2406 aa1.46□□□□□ -2.18
HMGB1P12-201ENST00000438594 FAM208BQ5VWN6 2430 aa1.46□□□□□ -2.18
HMGB1P12-201ENST00000438594 RELNP78509 3460 aa1.46□□□□□ -2.18
HMGB1P12-201ENST00000438594 TTTY10Q9BZA0 68 aa1.46□□□□□ -2.18
HMGB1P12-201ENST00000438594 CREBBPQ92793 2442 aa1.46□□□□□ -2.18
HMGB1P12-201ENST00000438594 POLQO75417 2590 aa1.46□□□□□ -2.18
HMGB1P12-201ENST00000438594 UBR5O95071 2799 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P12-201ENST00000438594 CEP250Q9BV73 2442 aa1.45□□□□□ -2.18
HMGB1P12-201ENST00000438594 COX6A2Q02221 97 aa1.45□□□□□ -2.18
HMGB1P12-201ENST00000438594 PIGYQ3MUY2 71 aa1.45□□□□□ -2.18
HMGB1P12-201ENST00000438594 LINC00308Q8TCZ7 52 aa1.45□□□□□ -2.18
HMGB1P12-201ENST00000438594 ARHGAP5-AS1Q96IT6 56 aa1.45□□□□□ -2.18
HMGB1P12-201ENST00000438594 C10orf95Q9H7T3 257 aa1.45□□□□□ -2.18
HMGB1P12-201ENST00000438594 TLN1Q9Y490 2541 aaKnown RBP1.45□□□□□ -2.18
HMGB1P12-201ENST00000438594 AKAP13Q12802 2813 aa1.44□□□□□ -2.18
HMGB1P12-201ENST00000438594 NSD1Q96L73 2696 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P12-201ENST00000438594 DMXL1Q9Y485 3027 aa1.44□□□□□ -2.18
HMGB1P12-201ENST00000438594 COX6B2Q6YFQ2 88 aa1.44□□□□□ -2.18
HMGB1P12-201ENST00000438594 USF3Q68DE3 2245 aa1.44□□□□□ -2.18
HMGB1P12-201ENST00000438594 FLNAP21333 2647 aaKnown RBP1.44□□□□□ -2.18
HMGB1P12-201ENST00000438594 SPTAN1Q13813 2472 aaKnown RBP1.44□□□□□ -2.18
HMGB1P12-201ENST00000438594 WDR87Q6ZQQ6 2873 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms