RNA–Protein interactions for RNA: ENST00000409168.7

SHISA6-202, Transcript of shisa family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA6, Length 7,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA6-202ENST00000409168 MGAM2Q2M2H8 2515 aa9.71□□□□□ -0.86
SHISA6-202ENST00000409168 KRTAP10-2P60368 255 aa9.71□□□□□ -0.86
SHISA6-202ENST00000409168 A8MU10 97 aa9.7□□□□□ -0.86
SHISA6-202ENST00000409168 KRTAP10-1P60331 282 aa9.7□□□□□ -0.86
SHISA6-202ENST00000409168 CYSTM1Q9H1C7 97 aa9.69□□□□□ -0.86
SHISA6-202ENST00000409168 ANKRD11Q6UB99 2663 aaPredicted RBP9.68□□□□□ -0.86
SHISA6-202ENST00000409168 PLAC8Q9NZF1 115 aa9.65□□□□□ -0.86
SHISA6-202ENST00000409168 BRCA2P51587 3418 aa9.65□□□□□ -0.86
SHISA6-202ENST00000409168 EPG5Q9HCE0 2579 aa9.64□□□□□ -0.87
SHISA6-202ENST00000409168 NDUFAF8A1L188 74 aa9.64□□□□□ -0.87
SHISA6-202ENST00000409168 Q6ZR54 194 aa9.63□□□□□ -0.87
SHISA6-202ENST00000409168 Q5XG85 94 aa9.61□□□□□ -0.87
SHISA6-202ENST00000409168 A8MUU9 505 aa9.59□□□□□ -0.87
SHISA6-202ENST00000409168 LAMA3Q16787 3333 aa9.59□□□□□ -0.87
SHISA6-202ENST00000409168 A0A096LNT2 108 aa9.58□□□□□ -0.88
SHISA6-202ENST00000409168 MKI67P46013 3256 aaKnown RBP9.57□□□□□ -0.88
SHISA6-202ENST00000409168 A0A0C4DFX4 3053 aa9.55□□□□□ -0.88
SHISA6-202ENST00000409168 A0A1B0GVY2 172 aa9.52□□□□□ -0.89
SHISA6-202ENST00000409168 SPRR1BP22528 89 aa9.51□□□□□ -0.89
SHISA6-202ENST00000409168 KRTAP26-1Q6PEX3 210 aa9.51□□□□□ -0.89
SHISA6-202ENST00000409168 KRTAP1-3Q8IUG1 177 aa9.51□□□□□ -0.89
SHISA6-202ENST00000409168 DNAH14Q0VDD8 3507 aa9.49□□□□□ -0.89
SHISA6-202ENST00000409168 KRTAP1-5Q9BYS1 174 aa9.49□□□□□ -0.89
SHISA6-202ENST00000409168 ATRQ13535 2644 aa9.48□□□□□ -0.89
SHISA6-202ENST00000409168 XIRP2A4UGR9 3374 aa9.48□□□□□ -0.89
SHISA6-202ENST00000409168 PANO1I0J062 215 aa9.48□□□□□ -0.89
SHISA6-202ENST00000409168 LAMA2P24043 3122 aaKnown RBP9.48□□□□□ -0.89
SHISA6-202ENST00000409168 LINC00472Q9H8W2 130 aa9.48□□□□□ -0.89
SHISA6-202ENST00000409168 OXTP01178 125 aa9.47□□□□□ -0.89
SHISA6-202ENST00000409168 KRTAP1-1Q07627 177 aa9.46□□□□□ -0.9
SHISA6-202ENST00000409168 LCE6AA0A183 80 aa9.44□□□□□ -0.9
SHISA6-202ENST00000409168 HECTD1Q9ULT8 2610 aa9.44□□□□□ -0.9
SHISA6-202ENST00000409168 A0A087X002 238 aa9.43□□□□□ -0.9
SHISA6-202ENST00000409168 KRTAP10-8P60410 259 aa9.41□□□□□ -0.9
SHISA6-202ENST00000409168 DMBT1Q9UGM3 2413 aaPredicted RBP9.4□□□□□ -0.91
SHISA6-202ENST00000409168 CDH23Q9H251 3354 aa9.39□□□□□ -0.91
SHISA6-202ENST00000409168 CEP295Q9C0D2 2601 aa9.38□□□□□ -0.91
SHISA6-202ENST00000409168 NOTCH2NLQ7Z3S9 236 aa9.38□□□□□ -0.91
SHISA6-202ENST00000409168 PRRC2CQ9Y520 2896 aaKnown RBP9.37□□□□□ -0.91
SHISA6-202ENST00000409168 KRTAP25-1Q3LHN0 102 aa9.35□□□□□ -0.91
SHISA6-202ENST00000409168 TNP1P09430 55 aa9.34□□□□□ -0.91
SHISA6-202ENST00000409168 P0C880 135 aa9.34□□□□□ -0.91
SHISA6-202ENST00000409168 CFAP46Q8IYW2 2715 aa9.29□□□□□ -0.92
SHISA6-202ENST00000409168 MAST4O15021 2626 aa9.27□□□□□ -0.93
SHISA6-202ENST00000409168 ITPR3Q14573 2671 aa9.25□□□□□ -0.93
SHISA6-202ENST00000409168 CELSR3Q9NYQ7 3312 aa9.25□□□□□ -0.93
SHISA6-202ENST00000409168 SPRR1AP35321 89 aa9.23□□□□□ -0.93
SHISA6-202ENST00000409168 STAB1Q9NY15 2570 aa9.23□□□□□ -0.93
SHISA6-202ENST00000409168 CFAP54Q96N23 3096 aa9.23□□□□□ -0.93
SHISA6-202ENST00000409168 STAB2Q8WWQ8 2551 aa9.22□□□□□ -0.93
SHISA6-202ENST00000409168 UNC80Q8N2C7 3258 aa9.22□□□□□ -0.93
SHISA6-202ENST00000409168 SZT2Q5T011 3432 aa9.21□□□□□ -0.94
SHISA6-202ENST00000409168 FLNBO75369 2602 aaKnown RBP9.2□□□□□ -0.94
SHISA6-202ENST00000409168 PRUNE2Q8WUY3 3088 aa9.16□□□□□ -0.94
SHISA6-202ENST00000409168 USP34Q70CQ2 3546 aa9.12□□□□□ -0.95
SHISA6-202ENST00000409168 AKAP13Q12802 2813 aa9.12□□□□□ -0.95
SHISA6-202ENST00000409168 NBEAL1Q6ZS30 2694 aa9.11□□□□□ -0.95
SHISA6-202ENST00000409168 FREM2Q5SZK8 3169 aa9.11□□□□□ -0.95
SHISA6-202ENST00000409168 HTTP42858 3142 aa9.1□□□□□ -0.95
SHISA6-202ENST00000409168 RANBP2P49792 3224 aaKnown RBP9.1□□□□□ -0.95
SHISA6-202ENST00000409168 CHD7Q9P2D1 2997 aa9.1□□□□□ -0.95
SHISA6-202ENST00000409168 VPS13AQ96RL7 3174 aa9.05□□□□□ -0.96
SHISA6-202ENST00000409168 KRTAP11-1Q8IUC1 163 aa9.04□□□□□ -0.96
SHISA6-202ENST00000409168 TRIOO75962 3097 aa9.03□□□□□ -0.96
SHISA6-202ENST00000409168 KRTAP10-10P60014 251 aa9.01□□□□□ -0.97
SHISA6-202ENST00000409168 SPEGQ15772 3267 aa8.99□□□□□ -0.97
SHISA6-202ENST00000409168 VCANP13611 3396 aa8.99□□□□□ -0.97
SHISA6-202ENST00000409168 FLNAP21333 2647 aaKnown RBP8.97□□□□□ -0.97
SHISA6-202ENST00000409168 LAMA1P25391 3075 aa8.96□□□□□ -0.98
SHISA6-202ENST00000409168 KRTAP4-16G5E9R7 235 aaPredicted RBP8.95□□□□□ -0.98
SHISA6-202ENST00000409168 MYO15AQ9UKN7 3530 aa8.93□□□□□ -0.98
SHISA6-202ENST00000409168 A6NN06 94 aa8.93□□□□□ -0.98
SHISA6-202ENST00000409168 CHD6Q8TD26 2715 aa8.91□□□□□ -0.98
SHISA6-202ENST00000409168 REV3LO60673 3130 aa8.89□□□□□ -0.99
SHISA6-202ENST00000409168 KRTAP29-1A8MX34 341 aaPredicted RBP8.89□□□□□ -0.99
SHISA6-202ENST00000409168 TEX15Q9BXT5 2789 aa8.89□□□□□ -0.99
SHISA6-202ENST00000409168 KRTAP13-2Q52LG2 175 aa8.86□□□□□ -0.99
SHISA6-202ENST00000409168 ASB16-AS1Q495Z4 193 aa8.8□□□□□ -1
SHISA6-202ENST00000409168 HELZ2Q9BYK8 2649 aaKnown RBP8.78□□□□□ -1
SHISA6-202ENST00000409168 EYSQ5T1H1 3165 aa8.78□□□□□ -1
SHISA6-202ENST00000409168 CENPEQ02224 2701 aa8.77□□□□□ -1.01
SHISA6-202ENST00000409168 COL6A5A8TX70 2615 aa8.77□□□□□ -1.01
SHISA6-202ENST00000409168 KMT2BQ9UMN6 2715 aaPredicted RBP8.75□□□□□ -1.01
SHISA6-202ENST00000409168 SETXQ7Z333 2677 aaKnown RBP8.75□□□□□ -1.01
SHISA6-202ENST00000409168 WDFY3Q8IZQ1 3526 aa8.74□□□□□ -1.01
SHISA6-202ENST00000409168 CRYBG3Q68DQ2 2970 aa8.74□□□□□ -1.01
SHISA6-202ENST00000409168 SPTBN5Q9NRC6 3674 aaKnown RBP8.74□□□□□ -1.01
SHISA6-202ENST00000409168 COL6A3P12111 3177 aa8.73□□□□□ -1.01
SHISA6-202ENST00000409168 BAHCC1Q9P281 2608 aa8.72□□□□□ -1.01
SHISA6-202ENST00000409168 FRYQ5TBA9 3013 aa8.71□□□□□ -1.02
SHISA6-202ENST00000409168 FRYLO94915 3013 aa8.7□□□□□ -1.02
SHISA6-202ENST00000409168 WDFY4Q6ZS81 3184 aa8.69□□□□□ -1.02
SHISA6-202ENST00000409168 Q6ZRN7 208 aaPredicted RBP8.69□□□□□ -1.02
SHISA6-202ENST00000409168 PRO2289Q9P1D8 64 aa8.68□□□□□ -1.02
SHISA6-202ENST00000409168 UNC79Q9P2D8 2635 aa8.68□□□□□ -1.02
SHISA6-202ENST00000409168 TEP1Q99973 2627 aaKnown RBP8.67□□□□□ -1.02
SHISA6-202ENST00000409168 CHD9Q3L8U1 2897 aa8.65□□□□□ -1.02
SHISA6-202ENST00000409168 NOTCH1P46531 2555 aa8.63□□□□□ -1.03
SHISA6-202ENST00000409168 TRANK1O15050 2925 aa8.6□□□□□ -1.03
SHISA6-202ENST00000409168 CRCT1Q9UGL9 99 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms