RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 H7BZZ5 65 aa4.63□□□□□ -1.67
USP47-203ENST00000399455 A0A087X002 238 aa4.63□□□□□ -1.67
USP47-203ENST00000399455 Q75L30 129 aa4.63□□□□□ -1.67
USP47-203ENST00000399455 ASB16-AS1Q495Z4 193 aa4.63□□□□□ -1.67
USP47-203ENST00000399455 Q8N9P0 234 aaPredicted RBP4.63□□□□□ -1.67
USP47-203ENST00000399455 Q8NDZ9 215 aa4.63□□□□□ -1.67
USP47-203ENST00000399455 BAHCC1Q9P281 2608 aa4.62□□□□□ -1.67
USP47-203ENST00000399455 ADM2Q7Z4H4 148 aa4.61□□□□□ -1.67
USP47-203ENST00000399455 GOLGB1Q14789 3259 aaKnown RBP4.6□□□□□ -1.67
USP47-203ENST00000399455 RPL37P61927 97 aaKnown RBP4.59□□□□□ -1.67
USP47-203ENST00000399455 CFAP46Q8IYW2 2715 aa4.59□□□□□ -1.67
USP47-203ENST00000399455 USP24Q9UPU5 2620 aa4.59□□□□□ -1.67
USP47-203ENST00000399455 KMT2BQ9UMN6 2715 aaPredicted RBP4.59□□□□□ -1.68
USP47-203ENST00000399455 MGAM2Q2M2H8 2515 aa4.56□□□□□ -1.68
USP47-203ENST00000399455 KRTAP4-16G5E9R7 235 aaPredicted RBP4.56□□□□□ -1.68
USP47-203ENST00000399455 Q5XG85 94 aa4.56□□□□□ -1.68
USP47-203ENST00000399455 C20orf166-AS1Q96NR2 134 aa4.55□□□□□ -1.68
USP47-203ENST00000399455 MAST4O15021 2626 aa4.53□□□□□ -1.68
USP47-203ENST00000399455 LINC01558Q9Y6Z2 57 aa4.53□□□□□ -1.68
USP47-203ENST00000399455 BPTFQ12830 3046 aa4.52□□□□□ -1.69
USP47-203ENST00000399455 ATRQ13535 2644 aa4.52□□□□□ -1.69
USP47-203ENST00000399455 DNAH12Q6ZR08 3092 aa4.51□□□□□ -1.69
USP47-203ENST00000399455 KTN1-AS1Q86SY8 53 aa4.51□□□□□ -1.69
USP47-203ENST00000399455 KRTAP13-2Q52LG2 175 aa4.49□□□□□ -1.69
USP47-203ENST00000399455 A8MUU9 505 aa4.49□□□□□ -1.69
USP47-203ENST00000399455 ROMO1P60602 79 aa4.47□□□□□ -1.69
USP47-203ENST00000399455 KRTAP13-1Q8IUC0 172 aa4.46□□□□□ -1.7
USP47-203ENST00000399455 KRTAP11-1Q8IUC1 163 aa4.45□□□□□ -1.7
USP47-203ENST00000399455 CHD7Q9P2D1 2997 aa4.44□□□□□ -1.7
USP47-203ENST00000399455 KRTAP29-1A8MX34 341 aaPredicted RBP4.44□□□□□ -1.7
USP47-203ENST00000399455 UTRNP46939 3433 aa4.44□□□□□ -1.7
USP47-203ENST00000399455 TPRXLQ17RH7 258 aa4.43□□□□□ -1.7
USP47-203ENST00000399455 CHD9Q3L8U1 2897 aa4.42□□□□□ -1.7
USP47-203ENST00000399455 ZNF292O60281 2723 aa4.42□□□□□ -1.7
USP47-203ENST00000399455 C5orf42Q9H799 3197 aa4.42□□□□□ -1.7
USP47-203ENST00000399455 TRANK1O15050 2925 aa4.41□□□□□ -1.7
USP47-203ENST00000399455 NOTCH2NLQ7Z3S9 236 aa4.39□□□□□ -1.71
USP47-203ENST00000399455 IGSF10Q6WRI0 2623 aa4.39□□□□□ -1.71
USP47-203ENST00000399455 KRTAP7-1Q8IUC3 87 aa4.38□□□□□ -1.71
USP47-203ENST00000399455 XP32Q5T750 250 aa4.37□□□□□ -1.71
USP47-203ENST00000399455 ITPR2Q14571 2701 aa4.36□□□□□ -1.71
USP47-203ENST00000399455 AKAP13Q12802 2813 aa4.35□□□□□ -1.71
USP47-203ENST00000399455 TEP1Q99973 2627 aaKnown RBP4.35□□□□□ -1.71
USP47-203ENST00000399455 CEP350Q5VT06 3117 aa4.35□□□□□ -1.71
USP47-203ENST00000399455 SPATA8Q6RVD6 105 aa4.35□□□□□ -1.71
USP47-203ENST00000399455 PRO2289Q9P1D8 64 aa4.34□□□□□ -1.71
USP47-203ENST00000399455 UNC79Q9P2D8 2635 aa4.34□□□□□ -1.71
USP47-203ENST00000399455 TEX15Q9BXT5 2789 aa4.34□□□□□ -1.72
USP47-203ENST00000399455 A0A1B0GVY2 172 aa4.33□□□□□ -1.72
USP47-203ENST00000399455 TNP1P09430 55 aa4.33□□□□□ -1.72
USP47-203ENST00000399455 HTTP42858 3142 aa4.31□□□□□ -1.72
USP47-203ENST00000399455 A0A0A0MQY5 61 aa4.31□□□□□ -1.72
USP47-203ENST00000399455 Q5VV11 94 aa4.3□□□□□ -1.72
USP47-203ENST00000399455 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
USP47-203ENST00000399455 KRTAP1-4P0C5Y4 121 aa4.3□□□□□ -1.72
USP47-203ENST00000399455 COL6A5A8TX70 2615 aa4.28□□□□□ -1.72
USP47-203ENST00000399455 GCN1Q92616 2671 aaKnown RBP4.27□□□□□ -1.73
USP47-203ENST00000399455 STAB1Q9NY15 2570 aa4.27□□□□□ -1.73
USP47-203ENST00000399455 PRRC2CQ9Y520 2896 aaKnown RBP4.27□□□□□ -1.73
USP47-203ENST00000399455 KRTAP10-8P60410 259 aa4.26□□□□□ -1.73
USP47-203ENST00000399455 KRTAP13-3Q3SY46 172 aa4.24□□□□□ -1.73
USP47-203ENST00000399455 MGAQ8IWI9 3026 aa4.22□□□□□ -1.73
USP47-203ENST00000399455 SETXQ7Z333 2677 aaKnown RBP4.21□□□□□ -1.73
USP47-203ENST00000399455 CENPEQ02224 2701 aa4.19□□□□□ -1.74
USP47-203ENST00000399455 NSD1Q96L73 2696 aaPredicted RBP4.19□□□□□ -1.74
USP47-203ENST00000399455 NBEAL1Q6ZS30 2694 aa4.18□□□□□ -1.74
USP47-203ENST00000399455 TNRC18O15417 2968 aaPredicted RBP4.18□□□□□ -1.74
USP47-203ENST00000399455 PCNTO95613 3336 aa4.17□□□□□ -1.74
USP47-203ENST00000399455 MAP1AP78559 2803 aaPredicted RBP4.17□□□□□ -1.74
USP47-203ENST00000399455 PRAC1Q96KF2 57 aa4.16□□□□□ -1.74
USP47-203ENST00000399455 CHD6Q8TD26 2715 aa4.16□□□□□ -1.74
USP47-203ENST00000399455 A8MU10 97 aa4.15□□□□□ -1.74
USP47-203ENST00000399455 PP632Q6XCG6 107 aa4.15□□□□□ -1.75
USP47-203ENST00000399455 CYSTM1Q9H1C7 97 aa4.14□□□□□ -1.75
USP47-203ENST00000399455 MKI67P46013 3256 aaKnown RBP4.13□□□□□ -1.75
USP47-203ENST00000399455 DSPP15924 2871 aaKnown RBP4.13□□□□□ -1.75
USP47-203ENST00000399455 USP34Q70CQ2 3546 aa4.13□□□□□ -1.75
USP47-203ENST00000399455 RANBP2P49792 3224 aaKnown RBP4.12□□□□□ -1.75
USP47-203ENST00000399455 HIVEP1P15822 2718 aa4.11□□□□□ -1.75
USP47-203ENST00000399455 UTP20O75691 2785 aaKnown RBP4.08□□□□□ -1.76
USP47-203ENST00000399455 LAMA3Q16787 3333 aa4.08□□□□□ -1.76
USP47-203ENST00000399455 FLG2Q5D862 2391 aaPredicted RBP4.08□□□□□ -1.76
USP47-203ENST00000399455 UNC80Q8N2C7 3258 aa4.07□□□□□ -1.76
USP47-203ENST00000399455 NOTCH1P46531 2555 aa4.06□□□□□ -1.76
USP47-203ENST00000399455 KRTAP25-1Q3LHN0 102 aa4.06□□□□□ -1.76
USP47-203ENST00000399455 PRUNE2Q8WUY3 3088 aa4.06□□□□□ -1.76
USP47-203ENST00000399455 C10orf95Q9H7T3 257 aa4.05□□□□□ -1.76
USP47-203ENST00000399455 TENM4Q6N022 2769 aa4.05□□□□□ -1.76
USP47-203ENST00000399455 DMBT1Q9UGM3 2413 aaPredicted RBP4.05□□□□□ -1.76
USP47-203ENST00000399455 KRTAP16-1A8MUX0 517 aa4.05□□□□□ -1.76
USP47-203ENST00000399455 UBR5O95071 2799 aaPredicted RBP4.05□□□□□ -1.76
USP47-203ENST00000399455 APCP25054 2843 aa4.01□□□□□ -1.77
USP47-203ENST00000399455 STAB2Q8WWQ8 2551 aa4□□□□□ -1.77
USP47-203ENST00000399455 ITPR1Q14643 2758 aa4□□□□□ -1.77
USP47-203ENST00000399455 LAMA1P25391 3075 aa3.99□□□□□ -1.77
USP47-203ENST00000399455 SPTBN5Q9NRC6 3674 aaKnown RBP3.99□□□□□ -1.77
USP47-203ENST00000399455 ALMS1Q8TCU4 4167 aa3.99□□□□□ -1.77
USP47-203ENST00000399455 CDH23Q9H251 3354 aa3.98□□□□□ -1.77
USP47-203ENST00000399455 EYSQ5T1H1 3165 aa3.98□□□□□ -1.77
USP47-203ENST00000399455 WDFY4Q6ZS81 3184 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms