RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 CFAP54Q96N23 3096 aa10.05□□□□□ -0.8
PCDHA12-201ENST00000398631 SPRR1AP35321 89 aa10.04□□□□□ -0.8
PCDHA12-201ENST00000398631 BAHCC1Q9P281 2608 aa10.04□□□□□ -0.8
PCDHA12-201ENST00000398631 DSPP15924 2871 aaKnown RBP10.03□□□□□ -0.8
PCDHA12-201ENST00000398631 UBR5O95071 2799 aaPredicted RBP10.02□□□□□ -0.81
PCDHA12-201ENST00000398631 MAP1AP78559 2803 aaPredicted RBP10.02□□□□□ -0.81
PCDHA12-201ENST00000398631 IGSF10Q6WRI0 2623 aa10.01□□□□□ -0.81
PCDHA12-201ENST00000398631 A0A0C4DFX4 3053 aa10.01□□□□□ -0.81
PCDHA12-201ENST00000398631 A0A0D9SG42 100 aa9.99□□□□□ -0.81
PCDHA12-201ENST00000398631 Q8NDZ9 215 aa9.99□□□□□ -0.81
PCDHA12-201ENST00000398631 WDFY4Q6ZS81 3184 aa9.96□□□□□ -0.82
PCDHA12-201ENST00000398631 KRTAP1-5Q9BYS1 174 aa9.95□□□□□ -0.82
PCDHA12-201ENST00000398631 SPRR1BP22528 89 aa9.94□□□□□ -0.82
PCDHA12-201ENST00000398631 HRES1P13985 223 aa9.93□□□□□ -0.82
PCDHA12-201ENST00000398631 LAMA3Q16787 3333 aa9.93□□□□□ -0.82
PCDHA12-201ENST00000398631 MMP24-AS1A0A0U1RRL7 71 aa9.92□□□□□ -0.82
PCDHA12-201ENST00000398631 Q75L30 129 aa9.91□□□□□ -0.82
PCDHA12-201ENST00000398631 ZCCHC13Q8WW36 166 aaKnown RBP9.89□□□□□ -0.83
PCDHA12-201ENST00000398631 NSD1Q96L73 2696 aaPredicted RBP9.89□□□□□ -0.83
PCDHA12-201ENST00000398631 STAB2Q8WWQ8 2551 aa9.88□□□□□ -0.83
PCDHA12-201ENST00000398631 KRTAP26-1Q6PEX3 210 aa9.88□□□□□ -0.83
PCDHA12-201ENST00000398631 NBEAL2Q6ZNJ1 2754 aa9.86□□□□□ -0.83
PCDHA12-201ENST00000398631 LCE6AA0A183 80 aa9.85□□□□□ -0.83
PCDHA12-201ENST00000398631 LINC01558Q9Y6Z2 57 aa9.84□□□□□ -0.83
PCDHA12-201ENST00000398631 M0R2T5 61 aa9.84□□□□□ -0.83
PCDHA12-201ENST00000398631 LINC00472Q9H8W2 130 aa9.84□□□□□ -0.83
PCDHA12-201ENST00000398631 Q5XG85 94 aa9.83□□□□□ -0.84
PCDHA12-201ENST00000398631 Q8N9P0 234 aaPredicted RBP9.83□□□□□ -0.84
PCDHA12-201ENST00000398631 A0A1B0GU33 70 aa9.82□□□□□ -0.84
PCDHA12-201ENST00000398631 KRTAP10-1P60331 282 aa9.8□□□□□ -0.84
PCDHA12-201ENST00000398631 CAMK2N1Q7Z7J9 78 aa9.8□□□□□ -0.84
PCDHA12-201ENST00000398631 CSAG1Q6PB30 78 aa9.79□□□□□ -0.84
PCDHA12-201ENST00000398631 TRIOO75962 3097 aa9.79□□□□□ -0.84
PCDHA12-201ENST00000398631 MKI67P46013 3256 aaKnown RBP9.79□□□□□ -0.84
PCDHA12-201ENST00000398631 LAMA2P24043 3122 aaKnown RBP9.79□□□□□ -0.84
PCDHA12-201ENST00000398631 Q5VSD8 79 aa9.78□□□□□ -0.84
PCDHA12-201ENST00000398631 FP248Q71RG6 208 aaPredicted RBP9.78□□□□□ -0.84
PCDHA12-201ENST00000398631 PRUNE2Q8WUY3 3088 aa9.77□□□□□ -0.85
PCDHA12-201ENST00000398631 KRTAP10-2P60368 255 aa9.77□□□□□ -0.85
PCDHA12-201ENST00000398631 DMBT1Q9UGM3 2413 aaPredicted RBP9.76□□□□□ -0.85
PCDHA12-201ENST00000398631 Q5W150 140 aa9.76□□□□□ -0.85
PCDHA12-201ENST00000398631 CYSTM1Q9H1C7 97 aa9.75□□□□□ -0.85
PCDHA12-201ENST00000398631 SPINK7P58062 85 aa9.75□□□□□ -0.85
PCDHA12-201ENST00000398631 ITPR2Q14571 2701 aa9.74□□□□□ -0.85
PCDHA12-201ENST00000398631 SEC61BP60468 96 aaKnown RBP9.72□□□□□ -0.85
PCDHA12-201ENST00000398631 ITPR1Q14643 2758 aa9.72□□□□□ -0.85
PCDHA12-201ENST00000398631 S4R3F8 94 aa9.7□□□□□ -0.86
PCDHA12-201ENST00000398631 FRYQ5TBA9 3013 aa9.7□□□□□ -0.86
PCDHA12-201ENST00000398631 LUZP6Q538Z0 58 aa9.69□□□□□ -0.86
PCDHA12-201ENST00000398631 BRCA2P51587 3418 aa9.69□□□□□ -0.86
PCDHA12-201ENST00000398631 FLNCQ14315 2725 aa9.68□□□□□ -0.86
PCDHA12-201ENST00000398631 Q6ZR54 194 aa9.68□□□□□ -0.86
PCDHA12-201ENST00000398631 Q5VV11 94 aa9.68□□□□□ -0.86
PCDHA12-201ENST00000398631 LINC00483Q53H64 154 aa9.66□□□□□ -0.86
PCDHA12-201ENST00000398631 DMAC1Q96GE9 116 aa9.64□□□□□ -0.87
PCDHA12-201ENST00000398631 PANO1I0J062 215 aa9.64□□□□□ -0.87
PCDHA12-201ENST00000398631 KRTAP4-16G5E9R7 235 aaPredicted RBP9.62□□□□□ -0.87
PCDHA12-201ENST00000398631 VPS13AQ96RL7 3174 aa9.61□□□□□ -0.87
PCDHA12-201ENST00000398631 TACC2O95359 2948 aa9.58□□□□□ -0.88
PCDHA12-201ENST00000398631 R4GN34 69 aa9.58□□□□□ -0.88
PCDHA12-201ENST00000398631 XIRP2A4UGR9 3374 aa9.55□□□□□ -0.88
PCDHA12-201ENST00000398631 OXTP01178 125 aa9.53□□□□□ -0.88
PCDHA12-201ENST00000398631 PRAC1Q96KF2 57 aa9.52□□□□□ -0.89
PCDHA12-201ENST00000398631 HIVEP1P15822 2718 aa9.52□□□□□ -0.89
PCDHA12-201ENST00000398631 A0A087X002 238 aa9.5□□□□□ -0.89
PCDHA12-201ENST00000398631 REV3LO60673 3130 aa9.5□□□□□ -0.89
PCDHA12-201ENST00000398631 UNC80Q8N2C7 3258 aa9.5□□□□□ -0.89
PCDHA12-201ENST00000398631 TENM4Q6N022 2769 aa9.48□□□□□ -0.89
PCDHA12-201ENST00000398631 UTP20O75691 2785 aaKnown RBP9.45□□□□□ -0.9
PCDHA12-201ENST00000398631 KMT2BQ9UMN6 2715 aaPredicted RBP9.45□□□□□ -0.9
PCDHA12-201ENST00000398631 ATMQ13315 3056 aa9.45□□□□□ -0.9
PCDHA12-201ENST00000398631 Q6ZRN7 208 aaPredicted RBP9.44□□□□□ -0.9
PCDHA12-201ENST00000398631 KRTAP29-1A8MX34 341 aaPredicted RBP9.43□□□□□ -0.9
PCDHA12-201ENST00000398631 COL12A1Q99715 3063 aa9.42□□□□□ -0.9
PCDHA12-201ENST00000398631 DMXL2Q8TDJ6 3036 aa9.41□□□□□ -0.9
PCDHA12-201ENST00000398631 ASB16-AS1Q495Z4 193 aa9.4□□□□□ -0.9
PCDHA12-201ENST00000398631 FRYLO94915 3013 aa9.4□□□□□ -0.9
PCDHA12-201ENST00000398631 NIPBLQ6KC79 2804 aaeCLIP9.39□□□□□ -0.91
PCDHA12-201ENST00000398631 RPL37P61927 97 aaKnown RBP9.39□□□□□ -0.91
PCDHA12-201ENST00000398631 M0QZ58 72 aa9.37□□□□□ -0.91
PCDHA12-201ENST00000398631 KRTAP11-1Q8IUC1 163 aa9.36□□□□□ -0.91
PCDHA12-201ENST00000398631 KALRNO60229 2985 aa9.35□□□□□ -0.91
PCDHA12-201ENST00000398631 H3BS24 57 aa9.34□□□□□ -0.91
PCDHA12-201ENST00000398631 RPS29P62273 56 aaKnown RBP9.33□□□□□ -0.92
PCDHA12-201ENST00000398631 ROMO1P60602 79 aa9.33□□□□□ -0.92
PCDHA12-201ENST00000398631 H1FX-AS1Q4G0G2 97 aa9.32□□□□□ -0.92
PCDHA12-201ENST00000398631 NOTCH2NLQ7Z3S9 236 aa9.31□□□□□ -0.92
PCDHA12-201ENST00000398631 FREM2Q5SZK8 3169 aa9.3□□□□□ -0.92
PCDHA12-201ENST00000398631 A0A0A0MQY5 61 aa9.3□□□□□ -0.92
PCDHA12-201ENST00000398631 KRTAP7-1Q8IUC3 87 aa9.29□□□□□ -0.92
PCDHA12-201ENST00000398631 LAMA1P25391 3075 aa9.29□□□□□ -0.92
PCDHA12-201ENST00000398631 APCP25054 2843 aa9.28□□□□□ -0.92
PCDHA12-201ENST00000398631 ASH1LQ9NR48 2969 aaKnown RBP9.28□□□□□ -0.92
PCDHA12-201ENST00000398631 KRTAP21-3Q3LHN1 58 aa9.27□□□□□ -0.93
PCDHA12-201ENST00000398631 ADM2Q7Z4H4 148 aa9.26□□□□□ -0.93
PCDHA12-201ENST00000398631 CELSR2Q9HCU4 2923 aa9.24□□□□□ -0.93
PCDHA12-201ENST00000398631 ADGRG4Q8IZF6 3080 aa9.23□□□□□ -0.93
PCDHA12-201ENST00000398631 LRBAP50851 2863 aa9.23□□□□□ -0.93
PCDHA12-201ENST00000398631 CDH23Q9H251 3354 aa9.22□□□□□ -0.93
PCDHA12-201ENST00000398631 KRTAP13-2Q52LG2 175 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms