RNA–Protein interactions for RNA: ENST00000395146.8

AFF1-202, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene AFF1, Length 9,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-202ENST00000395146 LINC00483Q53H64 154 aa6.5□□□□□ -1.37
AFF1-202ENST00000395146 KRTAP4-16G5E9R7 235 aaPredicted RBP6.49□□□□□ -1.37
AFF1-202ENST00000395146 PRAC1Q96KF2 57 aa6.49□□□□□ -1.37
AFF1-202ENST00000395146 KRTAP1-5Q9BYS1 174 aa6.49□□□□□ -1.37
AFF1-202ENST00000395146 CENPEQ02224 2701 aa6.48□□□□□ -1.37
AFF1-202ENST00000395146 Q6ZR54 194 aa6.48□□□□□ -1.37
AFF1-202ENST00000395146 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
AFF1-202ENST00000395146 S4R3F8 94 aa6.45□□□□□ -1.38
AFF1-202ENST00000395146 CFAP46Q8IYW2 2715 aa6.44□□□□□ -1.38
AFF1-202ENST00000395146 CSAG1Q6PB30 78 aa6.44□□□□□ -1.38
AFF1-202ENST00000395146 ASB16-AS1Q495Z4 193 aa6.42□□□□□ -1.38
AFF1-202ENST00000395146 TRANK1O15050 2925 aa6.42□□□□□ -1.38
AFF1-202ENST00000395146 CAMK2N1Q7Z7J9 78 aa6.42□□□□□ -1.38
AFF1-202ENST00000395146 GCN1Q92616 2671 aaKnown RBP6.41□□□□□ -1.38
AFF1-202ENST00000395146 ZNF292O60281 2723 aa6.4□□□□□ -1.38
AFF1-202ENST00000395146 C5orf42Q9H799 3197 aa6.4□□□□□ -1.39
AFF1-202ENST00000395146 CHD6Q8TD26 2715 aa6.37□□□□□ -1.39
AFF1-202ENST00000395146 UNC79Q9P2D8 2635 aa6.36□□□□□ -1.39
AFF1-202ENST00000395146 H3BS24 57 aa6.35□□□□□ -1.39
AFF1-202ENST00000395146 RPL37P61927 97 aaKnown RBP6.35□□□□□ -1.39
AFF1-202ENST00000395146 H1FX-AS1Q4G0G2 97 aa6.35□□□□□ -1.39
AFF1-202ENST00000395146 LCE6AA0A183 80 aa6.34□□□□□ -1.39
AFF1-202ENST00000395146 ROMO1P60602 79 aa6.34□□□□□ -1.39
AFF1-202ENST00000395146 AKAP13Q12802 2813 aa6.34□□□□□ -1.39
AFF1-202ENST00000395146 NBEAL1Q6ZS30 2694 aa6.34□□□□□ -1.39
AFF1-202ENST00000395146 UTRNP46939 3433 aa6.33□□□□□ -1.4
AFF1-202ENST00000395146 HTTP42858 3142 aa6.31□□□□□ -1.4
AFF1-202ENST00000395146 PANO1I0J062 215 aa6.3□□□□□ -1.4
AFF1-202ENST00000395146 KRTAP10-1P60331 282 aa6.3□□□□□ -1.4
AFF1-202ENST00000395146 R4GN34 69 aa6.3□□□□□ -1.4
AFF1-202ENST00000395146 SPATA8Q6RVD6 105 aa6.29□□□□□ -1.4
AFF1-202ENST00000395146 STAB1Q9NY15 2570 aa6.29□□□□□ -1.4
AFF1-202ENST00000395146 KRTAP10-2P60368 255 aa6.28□□□□□ -1.4
AFF1-202ENST00000395146 TEX15Q9BXT5 2789 aa6.26□□□□□ -1.41
AFF1-202ENST00000395146 MGAQ8IWI9 3026 aa6.26□□□□□ -1.41
AFF1-202ENST00000395146 PCNTO95613 3336 aa6.26□□□□□ -1.41
AFF1-202ENST00000395146 A0A0A0MQY5 61 aa6.25□□□□□ -1.41
AFF1-202ENST00000395146 A0A0C4DFX4 3053 aa6.25□□□□□ -1.41
AFF1-202ENST00000395146 SEC61BP60468 96 aaKnown RBP6.24□□□□□ -1.41
AFF1-202ENST00000395146 A6NN06 94 aa6.24□□□□□ -1.41
AFF1-202ENST00000395146 A0A087X002 238 aa6.23□□□□□ -1.41
AFF1-202ENST00000395146 NOTCH2NLQ7Z3S9 236 aa6.23□□□□□ -1.41
AFF1-202ENST00000395146 SETXQ7Z333 2677 aaKnown RBP6.22□□□□□ -1.41
AFF1-202ENST00000395146 NOTCH1P46531 2555 aa6.22□□□□□ -1.41
AFF1-202ENST00000395146 Q5VSD8 79 aa6.22□□□□□ -1.41
AFF1-202ENST00000395146 TEP1Q99973 2627 aaKnown RBP6.22□□□□□ -1.41
AFF1-202ENST00000395146 CFAP54Q96N23 3096 aa6.22□□□□□ -1.41
AFF1-202ENST00000395146 RPS29P62273 56 aaKnown RBP6.21□□□□□ -1.41
AFF1-202ENST00000395146 KRTAP7-1Q8IUC3 87 aa6.21□□□□□ -1.41
AFF1-202ENST00000395146 M0R2T5 61 aa6.21□□□□□ -1.42
AFF1-202ENST00000395146 COL6A5A8TX70 2615 aa6.21□□□□□ -1.42
AFF1-202ENST00000395146 KRTAP11-1Q8IUC1 163 aa6.2□□□□□ -1.42
AFF1-202ENST00000395146 RANBP2P49792 3224 aaKnown RBP6.2□□□□□ -1.42
AFF1-202ENST00000395146 NBEAL2Q6ZNJ1 2754 aa6.2□□□□□ -1.42
AFF1-202ENST00000395146 M0QZ58 72 aa6.19□□□□□ -1.42
AFF1-202ENST00000395146 IGSF10Q6WRI0 2623 aa6.19□□□□□ -1.42
AFF1-202ENST00000395146 Q6ZRN7 208 aaPredicted RBP6.18□□□□□ -1.42
AFF1-202ENST00000395146 KRTAP13-1Q8IUC0 172 aa6.17□□□□□ -1.42
AFF1-202ENST00000395146 ADM2Q7Z4H4 148 aa6.15□□□□□ -1.42
AFF1-202ENST00000395146 KRTAP25-1Q3LHN0 102 aa6.12□□□□□ -1.43
AFF1-202ENST00000395146 DSPP15924 2871 aaKnown RBP6.11□□□□□ -1.43
AFF1-202ENST00000395146 DMBT1Q9UGM3 2413 aaPredicted RBP6.11□□□□□ -1.43
AFF1-202ENST00000395146 UBR5O95071 2799 aaPredicted RBP6.09□□□□□ -1.43
AFF1-202ENST00000395146 MAP1AP78559 2803 aaPredicted RBP6.08□□□□□ -1.44
AFF1-202ENST00000395146 NSD1Q96L73 2696 aaPredicted RBP6.08□□□□□ -1.44
AFF1-202ENST00000395146 KRTAP13-2Q52LG2 175 aa6.08□□□□□ -1.44
AFF1-202ENST00000395146 FLG2Q5D862 2391 aaPredicted RBP6.07□□□□□ -1.44
AFF1-202ENST00000395146 STAB2Q8WWQ8 2551 aa6.05□□□□□ -1.44
AFF1-202ENST00000395146 BAHCC1Q9P281 2608 aa6.05□□□□□ -1.44
AFF1-202ENST00000395146 MKI67P46013 3256 aaKnown RBP6.05□□□□□ -1.44
AFF1-202ENST00000395146 LAMA3Q16787 3333 aa6.04□□□□□ -1.44
AFF1-202ENST00000395146 A8MU10 97 aa6.03□□□□□ -1.44
AFF1-202ENST00000395146 WDFY4Q6ZS81 3184 aa6.03□□□□□ -1.44
AFF1-202ENST00000395146 FRYQ5TBA9 3013 aa6.03□□□□□ -1.44
AFF1-202ENST00000395146 ITPR1Q14643 2758 aa6.03□□□□□ -1.44
AFF1-202ENST00000395146 LAMA2P24043 3122 aaKnown RBP6.02□□□□□ -1.45
AFF1-202ENST00000395146 ITPR2Q14571 2701 aa6.02□□□□□ -1.45
AFF1-202ENST00000395146 KMT2BQ9UMN6 2715 aaPredicted RBP6.01□□□□□ -1.45
AFF1-202ENST00000395146 PLAC4Q8WY50 150 aa6□□□□□ -1.45
AFF1-202ENST00000395146 FLNCQ14315 2725 aa5.97□□□□□ -1.45
AFF1-202ENST00000395146 TRIOO75962 3097 aa5.96□□□□□ -1.45
AFF1-202ENST00000395146 KRTAP16-1A8MUX0 517 aa5.96□□□□□ -1.46
AFF1-202ENST00000395146 A8MUU9 505 aa5.96□□□□□ -1.46
AFF1-202ENST00000395146 BRCA2P51587 3418 aa5.93□□□□□ -1.46
AFF1-202ENST00000395146 VPS13AQ96RL7 3174 aa5.92□□□□□ -1.46
AFF1-202ENST00000395146 C20orf166-AS1Q96NR2 134 aa5.92□□□□□ -1.46
AFF1-202ENST00000395146 UTP20O75691 2785 aaKnown RBP5.92□□□□□ -1.46
AFF1-202ENST00000395146 PRUNE2Q8WUY3 3088 aa5.91□□□□□ -1.46
AFF1-202ENST00000395146 APCP25054 2843 aa5.89□□□□□ -1.47
AFF1-202ENST00000395146 KALRNO60229 2985 aa5.88□□□□□ -1.47
AFF1-202ENST00000395146 NIPBLQ6KC79 2804 aaeCLIP5.86□□□□□ -1.47
AFF1-202ENST00000395146 UNC80Q8N2C7 3258 aa5.85□□□□□ -1.47
AFF1-202ENST00000395146 NDUFAF8A1L188 74 aa5.85□□□□□ -1.47
AFF1-202ENST00000395146 NBEAQ8NFP9 2946 aa5.85□□□□□ -1.47
AFF1-202ENST00000395146 LRBAP50851 2863 aa5.81□□□□□ -1.48
AFF1-202ENST00000395146 ATMQ13315 3056 aa5.81□□□□□ -1.48
AFF1-202ENST00000395146 XIRP2A4UGR9 3374 aa5.8□□□□□ -1.48
AFF1-202ENST00000395146 HIVEP1P15822 2718 aa5.8□□□□□ -1.48
AFF1-202ENST00000395146 KRTAP1-4P0C5Y4 121 aa5.8□□□□□ -1.48
AFF1-202ENST00000395146 CDH23Q9H251 3354 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms