RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 FAT1Q14517 4588 aa12.31□□□□□ -0.44
TSSC4-203ENST00000380996 LAMTOR3Q9UHA4 124 aa12.31□□□□□ -0.44
TSSC4-203ENST00000380996 LINC00483Q53H64 154 aa12.3□□□□□ -0.44
TSSC4-203ENST00000380996 NDUFV3P56181 108 aaKnown RBP12.29□□□□□ -0.44
TSSC4-203ENST00000380996 SRRM2Q9UQ35 2752 aaKnown RBP12.27□□□□□ -0.45
TSSC4-203ENST00000380996 F8WEM9 126 aa12.26□□□□□ -0.45
TSSC4-203ENST00000380996 C3orf22Q8N5N4 141 aa12.26□□□□□ -0.45
TSSC4-203ENST00000380996 JMJD7-PLA2G4BH0Y9G9 81 aa12.25□□□□□ -0.45
TSSC4-203ENST00000380996 SMIM29Q86T20 159 aa12.25□□□□□ -0.45
TSSC4-203ENST00000380996 ETDBQ3ZM63 59 aa12.23□□□□□ -0.45
TSSC4-203ENST00000380996 TEN1Q86WV5 123 aa12.23□□□□□ -0.45
TSSC4-203ENST00000380996 ANAPC11Q9NYG5 84 aa12.22□□□□□ -0.45
TSSC4-203ENST00000380996 FAM229BQ4G0N7 80 aa12.21□□□□□ -0.45
TSSC4-203ENST00000380996 RBM3P98179 157 aaKnown RBP12.21□□□□□ -0.46
TSSC4-203ENST00000380996 KRTAP1-4P0C5Y4 121 aa12.19□□□□□ -0.46
TSSC4-203ENST00000380996 OBSCN-AS1Q96MR7 158 aa12.19□□□□□ -0.46
TSSC4-203ENST00000380996 A0A1B0GV72 72 aa12.18□□□□□ -0.46
TSSC4-203ENST00000380996 KRTAP17-1Q9BYP8 105 aa12.18□□□□□ -0.46
TSSC4-203ENST00000380996 IGLV9-49A0A0B4J1Y8 123 aa12.16□□□□□ -0.46
TSSC4-203ENST00000380996 CRYGAP11844 174 aa12.16□□□□□ -0.46
TSSC4-203ENST00000380996 DSCR8Q96T75 97 aa12.16□□□□□ -0.46
TSSC4-203ENST00000380996 IGLV8-61A0A075B6I0 122 aa12.16□□□□□ -0.46
TSSC4-203ENST00000380996 C9orf153Q5TBE3 101 aa12.15□□□□□ -0.46
TSSC4-203ENST00000380996 Q6JHZ5 121 aa12.13□□□□□ -0.47
TSSC4-203ENST00000380996 C14orf132Q9NPU4 83 aa12.13□□□□□ -0.47
TSSC4-203ENST00000380996 PDE6GP18545 87 aa12.12□□□□□ -0.47
TSSC4-203ENST00000380996 Q8NBF4 154 aa12.12□□□□□ -0.47
TSSC4-203ENST00000380996 A0A087X002 238 aa12.11□□□□□ -0.47
TSSC4-203ENST00000380996 MOBPQ13875 183 aa12.11□□□□□ -0.47
TSSC4-203ENST00000380996 KRTAP4-5Q9BYR2 181 aa12.11□□□□□ -0.47
TSSC4-203ENST00000380996 TRBV7-4A0A0J9YYF1 115 aa12.11□□□□□ -0.47
TSSC4-203ENST00000380996 PCLOQ9Y6V0 5065 aa12.11□□□□□ -0.47
TSSC4-203ENST00000380996 LOC110117498A0A087WWA1 95 aa12.09□□□□□ -0.47
TSSC4-203ENST00000380996 C21orf62-AS1Q17RA5 79 aa12.09□□□□□ -0.47
TSSC4-203ENST00000380996 SSBP3-AS1Q7Z2R9 100 aa12.09□□□□□ -0.47
TSSC4-203ENST00000380996 KRTAP13-2Q52LG2 175 aa12.07□□□□□ -0.48
TSSC4-203ENST00000380996 IGFL1Q6UW32 110 aa12.07□□□□□ -0.48
TSSC4-203ENST00000380996 Q6ZQT0 140 aa12.06□□□□□ -0.48
TSSC4-203ENST00000380996 PKHD1L1Q86WI1 4243 aa12.05□□□□□ -0.48
TSSC4-203ENST00000380996 PRR26Q8N8Z3 221 aa12.05□□□□□ -0.48
TSSC4-203ENST00000380996 ABCA13Q86UQ4 5058 aa12.04□□□□□ -0.48
TSSC4-203ENST00000380996 TYMSOSQ8TAI1 123 aa12.04□□□□□ -0.48
TSSC4-203ENST00000380996 CCKP06307 115 aa12.02□□□□□ -0.48
TSSC4-203ENST00000380996 VPS25Q9BRG1 176 aa12.01□□□□□ -0.49
TSSC4-203ENST00000380996 A0A0G2JQZ4 141 aa12□□□□□ -0.49
TSSC4-203ENST00000380996 J3QR89 54 aa12□□□□□ -0.49
TSSC4-203ENST00000380996 A0A1W2PNM2 257 aa11.98□□□□□ -0.49
TSSC4-203ENST00000380996 Q6Q795 121 aa11.97□□□□□ -0.49
TSSC4-203ENST00000380996 A0A1B0GW54 56 aa11.96□□□□□ -0.5
TSSC4-203ENST00000380996 CD164Q04900 197 aa11.95□□□□□ -0.5
TSSC4-203ENST00000380996 C4orf48Q5BLP8 95 aa11.93□□□□□ -0.5
TSSC4-203ENST00000380996 K7ERU9 68 aa11.92□□□□□ -0.5
TSSC4-203ENST00000380996 HRCT1Q6UXD1 115 aa11.92□□□□□ -0.5
TSSC4-203ENST00000380996 OXTP01178 125 aa11.91□□□□□ -0.5
TSSC4-203ENST00000380996 ACYP1P07311 99 aa11.91□□□□□ -0.5
TSSC4-203ENST00000380996 TRBV7-7A0A0K0K1E9 115 aa11.9□□□□□ -0.5
TSSC4-203ENST00000380996 FAM240AA0A1B0GVK7 77 aa11.9□□□□□ -0.5
TSSC4-203ENST00000380996 KRTAP10-8P60410 259 aa11.9□□□□□ -0.5
TSSC4-203ENST00000380996 SPAG11AQ6PDA7 123 aa11.9□□□□□ -0.5
TSSC4-203ENST00000380996 LINC00304Q8N9R0 145 aa11.9□□□□□ -0.5
TSSC4-203ENST00000380996 FLG2Q5D862 2391 aaPredicted RBP11.87□□□□□ -0.51
TSSC4-203ENST00000380996 A0A087WSZ3 146 aa11.86□□□□□ -0.51
TSSC4-203ENST00000380996 SPINK1P00995 79 aa11.86□□□□□ -0.51
TSSC4-203ENST00000380996 SS18L2Q9UHA2 77 aa11.84□□□□□ -0.51
TSSC4-203ENST00000380996 LINC00846Q9NV44 126 aa11.82□□□□□ -0.52
TSSC4-203ENST00000380996 KRTAP29-1A8MX34 341 aaPredicted RBP11.81□□□□□ -0.52
TSSC4-203ENST00000380996 LRP1Q07954 4544 aaKnown RBP11.81□□□□□ -0.52
TSSC4-203ENST00000380996 LIMD2Q9BT23 127 aa11.81□□□□□ -0.52
TSSC4-203ENST00000380996 UBL5Q9BZL1 73 aa11.81□□□□□ -0.52
TSSC4-203ENST00000380996 FAT3Q8TDW7 4589 aa11.8□□□□□ -0.52
TSSC4-203ENST00000380996 RPS29P62273 56 aaKnown RBP11.8□□□□□ -0.52
TSSC4-203ENST00000380996 NREPQ16612 68 aa11.79□□□□□ -0.52
TSSC4-203ENST00000380996 MT1HL1P0DM35 61 aa11.78□□□□□ -0.52
TSSC4-203ENST00000380996 Q5XG85 94 aa11.78□□□□□ -0.52
TSSC4-203ENST00000380996 Q6ZVQ6 151 aa11.75□□□□□ -0.53
TSSC4-203ENST00000380996 MYCBP2O75592 4640 aa11.74□□□□□ -0.53
TSSC4-203ENST00000380996 ASB16-AS1Q495Z4 193 aa11.73□□□□□ -0.53
TSSC4-203ENST00000380996 TNXBP22105 4242 aa11.72□□□□□ -0.53
TSSC4-203ENST00000380996 J3QL48 77 aa11.69□□□□□ -0.54
TSSC4-203ENST00000380996 CDIP1Q9H305 208 aa11.67□□□□□ -0.54
TSSC4-203ENST00000380996 LINC00472Q9H8W2 130 aa11.67□□□□□ -0.54
TSSC4-203ENST00000380996 LINC00643Q86TS7 51 aa11.66□□□□□ -0.54
TSSC4-203ENST00000380996 BPY2O14599 106 aa11.65□□□□□ -0.55
TSSC4-203ENST00000380996 J3KT08 172 aa11.64□□□□□ -0.55
TSSC4-203ENST00000380996 C1orf195Q5TG92 126 aa11.63□□□□□ -0.55
TSSC4-203ENST00000380996 Q96NJ1 140 aa11.63□□□□□ -0.55
TSSC4-203ENST00000380996 SIGMAR1Q99720 223 aa11.63□□□□□ -0.55
TSSC4-203ENST00000380996 DEFB116Q30KQ4 102 aa11.62□□□□□ -0.55
TSSC4-203ENST00000380996 ATP5EP2Q5VTU8 51 aa11.62□□□□□ -0.55
TSSC4-203ENST00000380996 DMBT1Q9UGM3 2413 aaPredicted RBP11.6□□□□□ -0.55
TSSC4-203ENST00000380996 IGKV4-1P06312 121 aa11.6□□□□□ -0.55
TSSC4-203ENST00000380996 CXCL6P80162 114 aa11.6□□□□□ -0.55
TSSC4-203ENST00000380996 IGKV3D-7A0A0C4DH55 119 aa11.55□□□□□ -0.56
TSSC4-203ENST00000380996 NDUFB1O75438 58 aa11.54□□□□□ -0.56
TSSC4-203ENST00000380996 A8MWP4 228 aa11.52□□□□□ -0.57
TSSC4-203ENST00000380996 DSCR10P59022 87 aa11.52□□□□□ -0.57
TSSC4-203ENST00000380996 RETNLBQ9BQ08 111 aa11.52□□□□□ -0.57
TSSC4-203ENST00000380996 HERC1Q15751 4861 aa11.5□□□□□ -0.57
TSSC4-203ENST00000380996 FP248Q71RG6 208 aaPredicted RBP11.49□□□□□ -0.57
TSSC4-203ENST00000380996 K7EQZ3 153 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms