RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 ROMO1P60602 79 aa9.78□□□□□ -0.84
RGP1-201ENST00000378078 FP248Q71RG6 208 aaPredicted RBP9.77□□□□□ -0.84
RGP1-201ENST00000378078 USP24Q9UPU5 2620 aa9.75□□□□□ -0.85
RGP1-201ENST00000378078 DNAH14Q0VDD8 3507 aa9.74□□□□□ -0.85
RGP1-201ENST00000378078 LAMA3Q16787 3333 aa9.74□□□□□ -0.85
RGP1-201ENST00000378078 SZT2Q5T011 3432 aa9.73□□□□□ -0.85
RGP1-201ENST00000378078 USP9YO00507 2555 aaPredicted RBP9.73□□□□□ -0.85
RGP1-201ENST00000378078 CELSR3Q9NYQ7 3312 aa9.73□□□□□ -0.85
RGP1-201ENST00000378078 CDH23Q9H251 3354 aa9.72□□□□□ -0.85
RGP1-201ENST00000378078 LCE6AA0A183 80 aa9.72□□□□□ -0.85
RGP1-201ENST00000378078 CYSTM1Q9H1C7 97 aa9.72□□□□□ -0.85
RGP1-201ENST00000378078 RPL37P61927 97 aaKnown RBP9.71□□□□□ -0.85
RGP1-201ENST00000378078 LINC01558Q9Y6Z2 57 aa9.71□□□□□ -0.86
RGP1-201ENST00000378078 C20orf166-AS1Q96NR2 134 aa9.7□□□□□ -0.86
RGP1-201ENST00000378078 Q5VV11 94 aa9.68□□□□□ -0.86
RGP1-201ENST00000378078 CEP295Q9C0D2 2601 aa9.67□□□□□ -0.86
RGP1-201ENST00000378078 KRTAP26-1Q6PEX3 210 aa9.66□□□□□ -0.86
RGP1-201ENST00000378078 PRRC2CQ9Y520 2896 aaKnown RBP9.65□□□□□ -0.86
RGP1-201ENST00000378078 PRUNE2Q8WUY3 3088 aa9.64□□□□□ -0.87
RGP1-201ENST00000378078 PANO1I0J062 215 aa9.64□□□□□ -0.87
RGP1-201ENST00000378078 Q6ZR54 194 aa9.63□□□□□ -0.87
RGP1-201ENST00000378078 LINC00472Q9H8W2 130 aa9.63□□□□□ -0.87
RGP1-201ENST00000378078 CFAP54Q96N23 3096 aa9.6□□□□□ -0.87
RGP1-201ENST00000378078 OXTP01178 125 aa9.59□□□□□ -0.87
RGP1-201ENST00000378078 A0A087X002 238 aa9.59□□□□□ -0.87
RGP1-201ENST00000378078 Q5XG85 94 aa9.57□□□□□ -0.88
RGP1-201ENST00000378078 A8MU10 97 aa9.53□□□□□ -0.88
RGP1-201ENST00000378078 UNC80Q8N2C7 3258 aa9.53□□□□□ -0.88
RGP1-201ENST00000378078 LAMA2P24043 3122 aaKnown RBP9.53□□□□□ -0.88
RGP1-201ENST00000378078 RANBP2P49792 3224 aaKnown RBP9.52□□□□□ -0.89
RGP1-201ENST00000378078 SPRR1AP35321 89 aa9.52□□□□□ -0.89
RGP1-201ENST00000378078 FLG2Q5D862 2391 aaPredicted RBP9.52□□□□□ -0.89
RGP1-201ENST00000378078 A8MUU9 505 aa9.5□□□□□ -0.89
RGP1-201ENST00000378078 TRIOO75962 3097 aa9.48□□□□□ -0.89
RGP1-201ENST00000378078 MGAM2Q2M2H8 2515 aa9.48□□□□□ -0.89
RGP1-201ENST00000378078 NOTCH2NLQ7Z3S9 236 aa9.47□□□□□ -0.89
RGP1-201ENST00000378078 CHD7Q9P2D1 2997 aa9.46□□□□□ -0.9
RGP1-201ENST00000378078 HECTD1Q9ULT8 2610 aa9.45□□□□□ -0.9
RGP1-201ENST00000378078 A0A1B0GVY2 172 aa9.41□□□□□ -0.9
RGP1-201ENST00000378078 A0A0C4DFX4 3053 aa9.4□□□□□ -0.9
RGP1-201ENST00000378078 SPRR1BP22528 89 aa9.39□□□□□ -0.91
RGP1-201ENST00000378078 C10orf95Q9H7T3 257 aa9.37□□□□□ -0.91
RGP1-201ENST00000378078 FREM2Q5SZK8 3169 aa9.36□□□□□ -0.91
RGP1-201ENST00000378078 COL6A3P12111 3177 aa9.35□□□□□ -0.91
RGP1-201ENST00000378078 KRTAP11-1Q8IUC1 163 aa9.32□□□□□ -0.92
RGP1-201ENST00000378078 HTTP42858 3142 aa9.32□□□□□ -0.92
RGP1-201ENST00000378078 ITPR3Q14573 2671 aa9.31□□□□□ -0.92
RGP1-201ENST00000378078 REV3LO60673 3130 aa9.3□□□□□ -0.92
RGP1-201ENST00000378078 FLNAP21333 2647 aaKnown RBP9.3□□□□□ -0.92
RGP1-201ENST00000378078 USP34Q70CQ2 3546 aa9.26□□□□□ -0.93
RGP1-201ENST00000378078 SPTBN5Q9NRC6 3674 aaKnown RBP9.26□□□□□ -0.93
RGP1-201ENST00000378078 KRTAP16-1A8MUX0 517 aa9.25□□□□□ -0.93
RGP1-201ENST00000378078 CFAP46Q8IYW2 2715 aa9.24□□□□□ -0.93
RGP1-201ENST00000378078 WDFY4Q6ZS81 3184 aa9.23□□□□□ -0.93
RGP1-201ENST00000378078 VPS13AQ96RL7 3174 aa9.22□□□□□ -0.93
RGP1-201ENST00000378078 EPG5Q9HCE0 2579 aa9.22□□□□□ -0.93
RGP1-201ENST00000378078 VCANP13611 3396 aa9.21□□□□□ -0.94
RGP1-201ENST00000378078 KRTAP10-8P60410 259 aa9.19□□□□□ -0.94
RGP1-201ENST00000378078 MGAQ8IWI9 3026 aa9.19□□□□□ -0.94
RGP1-201ENST00000378078 NDUFAF8A1L188 74 aa9.18□□□□□ -0.94
RGP1-201ENST00000378078 KRTAP25-1Q3LHN0 102 aa9.15□□□□□ -0.94
RGP1-201ENST00000378078 SPEGQ15772 3267 aa9.15□□□□□ -0.94
RGP1-201ENST00000378078 FLNBO75369 2602 aaKnown RBP9.15□□□□□ -0.94
RGP1-201ENST00000378078 TNP1P09430 55 aa9.14□□□□□ -0.95
RGP1-201ENST00000378078 ATRQ13535 2644 aa9.13□□□□□ -0.95
RGP1-201ENST00000378078 MYO15AQ9UKN7 3530 aa9.11□□□□□ -0.95
RGP1-201ENST00000378078 CFAP47Q6ZTR5 3102 aa9.1□□□□□ -0.95
RGP1-201ENST00000378078 KRTAP4-16G5E9R7 235 aaPredicted RBP9.1□□□□□ -0.95
RGP1-201ENST00000378078 KRTAP13-2Q52LG2 175 aa9.09□□□□□ -0.95
RGP1-201ENST00000378078 KRTAP29-1A8MX34 341 aaPredicted RBP9.07□□□□□ -0.96
RGP1-201ENST00000378078 AKAP13Q12802 2813 aa9.06□□□□□ -0.96
RGP1-201ENST00000378078 EYSQ5T1H1 3165 aa9.05□□□□□ -0.96
RGP1-201ENST00000378078 MAST4O15021 2626 aa9.05□□□□□ -0.96
RGP1-201ENST00000378078 DMBT1Q9UGM3 2413 aaPredicted RBP9.03□□□□□ -0.96
RGP1-201ENST00000378078 TEX15Q9BXT5 2789 aa9.02□□□□□ -0.96
RGP1-201ENST00000378078 CHD6Q8TD26 2715 aa9.02□□□□□ -0.96
RGP1-201ENST00000378078 HELZ2Q9BYK8 2649 aaKnown RBP9.02□□□□□ -0.97
RGP1-201ENST00000378078 LAMA1P25391 3075 aa9.01□□□□□ -0.97
RGP1-201ENST00000378078 CRYBG3Q68DQ2 2970 aa9□□□□□ -0.97
RGP1-201ENST00000378078 NBEAL1Q6ZS30 2694 aa8.96□□□□□ -0.97
RGP1-201ENST00000378078 Q6ZRN7 208 aaPredicted RBP8.95□□□□□ -0.98
RGP1-201ENST00000378078 CHD9Q3L8U1 2897 aa8.95□□□□□ -0.98
RGP1-201ENST00000378078 KRTAP7-1Q8IUC3 87 aa8.94□□□□□ -0.98
RGP1-201ENST00000378078 ASPMQ8IZT6 3477 aa8.94□□□□□ -0.98
RGP1-201ENST00000378078 FRYQ5TBA9 3013 aa8.94□□□□□ -0.98
RGP1-201ENST00000378078 KRTAP10-10P60014 251 aa8.92□□□□□ -0.98
RGP1-201ENST00000378078 WDFY3Q8IZQ1 3526 aa8.88□□□□□ -0.99
RGP1-201ENST00000378078 A6NN06 94 aa8.85□□□□□ -0.99
RGP1-201ENST00000378078 RPS29P62273 56 aaKnown RBP8.85□□□□□ -0.99
RGP1-201ENST00000378078 ASB16-AS1Q495Z4 193 aa8.82□□□□□ -1
RGP1-201ENST00000378078 TEP1Q99973 2627 aaKnown RBP8.79□□□□□ -1
RGP1-201ENST00000378078 STAB1Q9NY15 2570 aa8.78□□□□□ -1
RGP1-201ENST00000378078 CENPEQ02224 2701 aa8.78□□□□□ -1
RGP1-201ENST00000378078 BOD1L1Q8NFC6 3051 aa8.76□□□□□ -1.01
RGP1-201ENST00000378078 COL6A5A8TX70 2615 aa8.75□□□□□ -1.01
RGP1-201ENST00000378078 P0C880 135 aa8.74□□□□□ -1.01
RGP1-201ENST00000378078 LRBAP50851 2863 aa8.74□□□□□ -1.01
RGP1-201ENST00000378078 XP32Q5T750 250 aa8.73□□□□□ -1.01
RGP1-201ENST00000378078 NBEAL2Q6ZNJ1 2754 aa8.72□□□□□ -1.01
RGP1-201ENST00000378078 KALRNO60229 2985 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms