RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 SEC61BP60468 96 aaKnown RBP11.45□□□□□ -0.58
TBC1D4-201ENST00000377625 Q5VSD8 79 aa11.45□□□□□ -0.58
TBC1D4-201ENST00000377625 CEP350Q5VT06 3117 aa11.4□□□□□ -0.58
TBC1D4-201ENST00000377625 CYSTM1Q9H1C7 97 aa11.4□□□□□ -0.58
TBC1D4-201ENST00000377625 PRAC1Q96KF2 57 aa11.39□□□□□ -0.59
TBC1D4-201ENST00000377625 KRTAP10-1P60331 282 aa11.39□□□□□ -0.59
TBC1D4-201ENST00000377625 KRTAP26-1Q6PEX3 210 aa11.38□□□□□ -0.59
TBC1D4-201ENST00000377625 Q5XG85 94 aa11.38□□□□□ -0.59
TBC1D4-201ENST00000377625 FP248Q71RG6 208 aaPredicted RBP11.37□□□□□ -0.59
TBC1D4-201ENST00000377625 Q5VV11 94 aa11.36□□□□□ -0.59
TBC1D4-201ENST00000377625 KRTAP10-2P60368 255 aa11.35□□□□□ -0.59
TBC1D4-201ENST00000377625 LCE6AA0A183 80 aa11.33□□□□□ -0.6
TBC1D4-201ENST00000377625 CENPEQ02224 2701 aa11.32□□□□□ -0.6
TBC1D4-201ENST00000377625 AKAP13Q12802 2813 aa11.31□□□□□ -0.6
TBC1D4-201ENST00000377625 FLG2Q5D862 2391 aaPredicted RBP11.31□□□□□ -0.6
TBC1D4-201ENST00000377625 RPL37P61927 97 aaKnown RBP11.26□□□□□ -0.61
TBC1D4-201ENST00000377625 NBEAL1Q6ZS30 2694 aa11.25□□□□□ -0.61
TBC1D4-201ENST00000377625 CHD6Q8TD26 2715 aa11.24□□□□□ -0.61
TBC1D4-201ENST00000377625 M0QZ58 72 aa11.24□□□□□ -0.61
TBC1D4-201ENST00000377625 TEX15Q9BXT5 2789 aa11.22□□□□□ -0.61
TBC1D4-201ENST00000377625 C5orf42Q9H799 3197 aa11.21□□□□□ -0.62
TBC1D4-201ENST00000377625 H1FX-AS1Q4G0G2 97 aa11.19□□□□□ -0.62
TBC1D4-201ENST00000377625 TEP1Q99973 2627 aaKnown RBP11.19□□□□□ -0.62
TBC1D4-201ENST00000377625 ROMO1P60602 79 aa11.19□□□□□ -0.62
TBC1D4-201ENST00000377625 PANO1I0J062 215 aa11.18□□□□□ -0.62
TBC1D4-201ENST00000377625 A0A0A0MQY5 61 aa11.17□□□□□ -0.62
TBC1D4-201ENST00000377625 Q6ZR54 194 aa11.15□□□□□ -0.62
TBC1D4-201ENST00000377625 KRTAP4-16G5E9R7 235 aaPredicted RBP11.14□□□□□ -0.63
TBC1D4-201ENST00000377625 SETXQ7Z333 2677 aaKnown RBP11.13□□□□□ -0.63
TBC1D4-201ENST00000377625 CHD7Q9P2D1 2997 aa11.13□□□□□ -0.63
TBC1D4-201ENST00000377625 ADM2Q7Z4H4 148 aa11.11□□□□□ -0.63
TBC1D4-201ENST00000377625 A0A087X002 238 aa11.09□□□□□ -0.63
TBC1D4-201ENST00000377625 UTRNP46939 3433 aa11.08□□□□□ -0.64
TBC1D4-201ENST00000377625 PLAC4Q8WY50 150 aa11.07□□□□□ -0.64
TBC1D4-201ENST00000377625 OXTP01178 125 aa11.06□□□□□ -0.64
TBC1D4-201ENST00000377625 SPATA8Q6RVD6 105 aa11.06□□□□□ -0.64
TBC1D4-201ENST00000377625 KRTAP29-1A8MX34 341 aaPredicted RBP11.05□□□□□ -0.64
TBC1D4-201ENST00000377625 COL6A5A8TX70 2615 aa11.05□□□□□ -0.64
TBC1D4-201ENST00000377625 UNC79Q9P2D8 2635 aa11.04□□□□□ -0.64
TBC1D4-201ENST00000377625 H3BS24 57 aa11.02□□□□□ -0.65
TBC1D4-201ENST00000377625 GCN1Q92616 2671 aaKnown RBP11.01□□□□□ -0.65
TBC1D4-201ENST00000377625 DMBT1Q9UGM3 2413 aaPredicted RBP11.01□□□□□ -0.65
TBC1D4-201ENST00000377625 NOTCH1P46531 2555 aa11□□□□□ -0.65
TBC1D4-201ENST00000377625 NOTCH2NLQ7Z3S9 236 aa10.96□□□□□ -0.66
TBC1D4-201ENST00000377625 MGAQ8IWI9 3026 aa10.94□□□□□ -0.66
TBC1D4-201ENST00000377625 CFAP54Q96N23 3096 aa10.93□□□□□ -0.66
TBC1D4-201ENST00000377625 CHD9Q3L8U1 2897 aa10.9□□□□□ -0.66
TBC1D4-201ENST00000377625 KRTAP11-1Q8IUC1 163 aa10.88□□□□□ -0.67
TBC1D4-201ENST00000377625 STAB2Q8WWQ8 2551 aa10.87□□□□□ -0.67
TBC1D4-201ENST00000377625 ASB16-AS1Q495Z4 193 aa10.86□□□□□ -0.67
TBC1D4-201ENST00000377625 RPS29P62273 56 aaKnown RBP10.84□□□□□ -0.67
TBC1D4-201ENST00000377625 ZNF292O60281 2723 aa10.82□□□□□ -0.68
TBC1D4-201ENST00000377625 Q6ZRN7 208 aaPredicted RBP10.82□□□□□ -0.68
TBC1D4-201ENST00000377625 A0A0C4DFX4 3053 aa10.81□□□□□ -0.68
TBC1D4-201ENST00000377625 NBEAL2Q6ZNJ1 2754 aa10.8□□□□□ -0.68
TBC1D4-201ENST00000377625 A8MUU9 505 aa10.75□□□□□ -0.69
TBC1D4-201ENST00000377625 PCNTO95613 3336 aa10.75□□□□□ -0.69
TBC1D4-201ENST00000377625 KRTAP7-1Q8IUC3 87 aa10.73□□□□□ -0.69
TBC1D4-201ENST00000377625 RANBP2P49792 3224 aaKnown RBP10.73□□□□□ -0.69
TBC1D4-201ENST00000377625 A8MU10 97 aa10.72□□□□□ -0.69
TBC1D4-201ENST00000377625 KRTAP13-2Q52LG2 175 aa10.71□□□□□ -0.69
TBC1D4-201ENST00000377625 UBR5O95071 2799 aaPredicted RBP10.7□□□□□ -0.7
TBC1D4-201ENST00000377625 BAHCC1Q9P281 2608 aa10.69□□□□□ -0.7
TBC1D4-201ENST00000377625 IGSF10Q6WRI0 2623 aa10.64□□□□□ -0.71
TBC1D4-201ENST00000377625 MAP1AP78559 2803 aaPredicted RBP10.63□□□□□ -0.71
TBC1D4-201ENST00000377625 KRTAP13-1Q8IUC0 172 aa10.63□□□□□ -0.71
TBC1D4-201ENST00000377625 C20orf166-AS1Q96NR2 134 aa10.63□□□□□ -0.71
TBC1D4-201ENST00000377625 WDFY4Q6ZS81 3184 aa10.63□□□□□ -0.71
TBC1D4-201ENST00000377625 HTTP42858 3142 aa10.63□□□□□ -0.71
TBC1D4-201ENST00000377625 DSPP15924 2871 aaKnown RBP10.62□□□□□ -0.71
TBC1D4-201ENST00000377625 KRTAP25-1Q3LHN0 102 aa10.6□□□□□ -0.71
TBC1D4-201ENST00000377625 NSD1Q96L73 2696 aaPredicted RBP10.6□□□□□ -0.71
TBC1D4-201ENST00000377625 TRANK1O15050 2925 aa10.6□□□□□ -0.71
TBC1D4-201ENST00000377625 FRYQ5TBA9 3013 aa10.55□□□□□ -0.72
TBC1D4-201ENST00000377625 A6NN06 94 aa10.54□□□□□ -0.72
TBC1D4-201ENST00000377625 ITPR2Q14571 2701 aa10.54□□□□□ -0.72
TBC1D4-201ENST00000377625 LAMA3Q16787 3333 aa10.53□□□□□ -0.72
TBC1D4-201ENST00000377625 MKI67P46013 3256 aaKnown RBP10.5□□□□□ -0.73
TBC1D4-201ENST00000377625 LAMA2P24043 3122 aaKnown RBP10.47□□□□□ -0.73
TBC1D4-201ENST00000377625 PRUNE2Q8WUY3 3088 aa10.46□□□□□ -0.73
TBC1D4-201ENST00000377625 KRTAP16-1A8MUX0 517 aa10.46□□□□□ -0.73
TBC1D4-201ENST00000377625 TRIOO75962 3097 aa10.44□□□□□ -0.74
TBC1D4-201ENST00000377625 ITPR1Q14643 2758 aa10.42□□□□□ -0.74
TBC1D4-201ENST00000377625 TNP1P09430 55 aa10.42□□□□□ -0.74
TBC1D4-201ENST00000377625 BRCA2P51587 3418 aa10.32□□□□□ -0.76
TBC1D4-201ENST00000377625 NDUFAF8A1L188 74 aa10.31□□□□□ -0.76
TBC1D4-201ENST00000377625 KRTAP21-3Q3LHN1 58 aa10.3□□□□□ -0.76
TBC1D4-201ENST00000377625 XIRP2A4UGR9 3374 aa10.27□□□□□ -0.77
TBC1D4-201ENST00000377625 C10orf95Q9H7T3 257 aa10.25□□□□□ -0.77
TBC1D4-201ENST00000377625 VPS13AQ96RL7 3174 aa10.25□□□□□ -0.77
TBC1D4-201ENST00000377625 TACC2O95359 2948 aa10.25□□□□□ -0.77
TBC1D4-201ENST00000377625 UTP20O75691 2785 aaKnown RBP10.24□□□□□ -0.77
TBC1D4-201ENST00000377625 FREM2Q5SZK8 3169 aa10.24□□□□□ -0.77
TBC1D4-201ENST00000377625 KMT2BQ9UMN6 2715 aaPredicted RBP10.23□□□□□ -0.77
TBC1D4-201ENST00000377625 APCP25054 2843 aa10.23□□□□□ -0.77
TBC1D4-201ENST00000377625 KALRNO60229 2985 aa10.19□□□□□ -0.78
TBC1D4-201ENST00000377625 REV3LO60673 3130 aa10.18□□□□□ -0.78
TBC1D4-201ENST00000377625 HIVEP1P15822 2718 aa10.17□□□□□ -0.78
TBC1D4-201ENST00000377625 XP32Q5T750 250 aa10.17□□□□□ -0.78
TBC1D4-201ENST00000377625 DMXL2Q8TDJ6 3036 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms