RNA–Protein interactions for RNA: ENST00000373821.6

SRPK1-203, Transcript of SRSF protein kinase 1, humanhuman

TSL 5

Gene SRPK1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-203ENST00000373821 NIPBLQ6KC79 2804 aaeCLIP0.23□□□□□ -2.37
SRPK1-203ENST00000373821 H1FX-AS1Q4G0G2 97 aa0.23□□□□□ -2.37
SRPK1-203ENST00000373821 USMG5Q96IX5 58 aa0.23□□□□□ -2.37
SRPK1-203ENST00000373821 GAFA1Q96PS6 74 aa0.23□□□□□ -2.37
SRPK1-203ENST00000373821 FXYD6Q9H0Q3 95 aa0.23□□□□□ -2.37
SRPK1-203ENST00000373821 APLNQ9ULZ1 77 aa0.23□□□□□ -2.37
SRPK1-203ENST00000373821 BCORQ6W2J9 1755 aa0.23□□□□□ -2.37
SRPK1-203ENST00000373821 PREX1Q8TCU6 1659 aa0.23□□□□□ -2.37
SRPK1-203ENST00000373821 ASPMQ8IZT6 3477 aa0.23□□□□□ -2.37
SRPK1-203ENST00000373821 NBPF19A0A087WUL8 3843 aa0.23□□□□□ -2.37
SRPK1-203ENST00000373821 MUC3AQ02505 3323 aa0.23□□□□□ -2.37
SRPK1-203ENST00000373821 WNK2Q9Y3S1 2297 aa0.22□□□□□ -2.37
SRPK1-203ENST00000373821 SCN11AQ9UI33 1791 aa0.22□□□□□ -2.37
SRPK1-203ENST00000373821 ARFGEF2Q9Y6D5 1785 aa0.22□□□□□ -2.37
SRPK1-203ENST00000373821 USP34Q70CQ2 3546 aa0.22□□□□□ -2.37
SRPK1-203ENST00000373821 SPTY2D1-AS1A0A0U1RR47 76 aa0.22□□□□□ -2.37
SRPK1-203ENST00000373821 KANTRA0A1W2PQU2 76 aa0.22□□□□□ -2.37
SRPK1-203ENST00000373821 PRM1P04553 51 aa0.22□□□□□ -2.37
SRPK1-203ENST00000373821 U3KQA8 63 aa0.22□□□□□ -2.37
SRPK1-203ENST00000373821 IQGAP3Q86VI3 1631 aa0.22□□□□□ -2.37
SRPK1-203ENST00000373821 UBR3Q6ZT12 1888 aa0.22□□□□□ -2.37
SRPK1-203ENST00000373821 CENPFP49454 3210 aa0.22□□□□□ -2.37
SRPK1-203ENST00000373821 MAGI3Q5TCQ9 1506 aa0.22□□□□□ -2.37
SRPK1-203ENST00000373821 SPTAN1Q13813 2472 aaKnown RBP0.21□□□□□ -2.38
SRPK1-203ENST00000373821 I3L3M4 83 aa0.21□□□□□ -2.38
SRPK1-203ENST00000373821 DEFB121Q5J5C9 76 aa0.21□□□□□ -2.38
SRPK1-203ENST00000373821 URB2Q14146 1524 aaKnown RBP0.21□□□□□ -2.38
SRPK1-203ENST00000373821 CCDC141Q6ZP82 1450 aa0.21□□□□□ -2.38
SRPK1-203ENST00000373821 ITPR2Q14571 2701 aa0.21□□□□□ -2.38
SRPK1-203ENST00000373821 WDR87Q6ZQQ6 2873 aa0.2□□□□□ -2.38
SRPK1-203ENST00000373821 CSMD2Q7Z408 3487 aa0.2□□□□□ -2.38
SRPK1-203ENST00000373821 IFI6P09912 130 aa0.2□□□□□ -2.38
SRPK1-203ENST00000373821 COX8AP10176 69 aa0.2□□□□□ -2.38
SRPK1-203ENST00000373821 WFDC9Q8NEX5 89 aa0.2□□□□□ -2.38
SRPK1-203ENST00000373821 MYCBP2O75592 4640 aa0.2□□□□□ -2.38
SRPK1-203ENST00000373821 MTORP42345 2549 aa0.2□□□□□ -2.38
SRPK1-203ENST00000373821 TIAM2Q8IVF5 1701 aa0.19□□□□□ -2.38
SRPK1-203ENST00000373821 MYO5CQ9NQX4 1742 aa0.19□□□□□ -2.38
SRPK1-203ENST00000373821 CD163L1Q9NR16 1453 aa0.19□□□□□ -2.38
SRPK1-203ENST00000373821 SPTBN5Q9NRC6 3674 aaKnown RBP0.19□□□□□ -2.38
SRPK1-203ENST00000373821 RGPD8O14715 1765 aaPredicted RBP0.19□□□□□ -2.38
SRPK1-203ENST00000373821 RGPD5Q99666 1765 aa0.19□□□□□ -2.38
SRPK1-203ENST00000373821 CSPG4Q6UVK1 2322 aa0.19□□□□□ -2.38
SRPK1-203ENST00000373821 CUBNO60494 3623 aa0.19□□□□□ -2.38
SRPK1-203ENST00000373821 HRNRQ86YZ3 2850 aaPredicted RBP0.19□□□□□ -2.38
SRPK1-203ENST00000373821 SVEP1Q4LDE5 3571 aa0.19□□□□□ -2.38
SRPK1-203ENST00000373821 RICTORQ6R327 1708 aa0.18□□□□□ -2.38
SRPK1-203ENST00000373821 ABCC1P33527 1531 aa0.18□□□□□ -2.38
SRPK1-203ENST00000373821 CFAP43Q8NDM7 1665 aa0.18□□□□□ -2.38
SRPK1-203ENST00000373821 TNRC6CQ9HCJ0 1690 aaKnown RBP0.18□□□□□ -2.38
SRPK1-203ENST00000373821 LRBAP50851 2863 aa0.18□□□□□ -2.38
SRPK1-203ENST00000373821 LPAP08519 4548 aa0.18□□□□□ -2.38
SRPK1-203ENST00000373821 NWD1Q149M9 1564 aa0.18□□□□□ -2.38
SRPK1-203ENST00000373821 WDFY3Q8IZQ1 3526 aa0.18□□□□□ -2.38
SRPK1-203ENST00000373821 LAMA5O15230 3695 aa0.18□□□□□ -2.38
SRPK1-203ENST00000373821 PLCH1Q4KWH8 1693 aa0.18□□□□□ -2.38
SRPK1-203ENST00000373821 NESP48681 1621 aa0.17□□□□□ -2.38
SRPK1-203ENST00000373821 PTPN23Q9H3S7 1636 aa0.17□□□□□ -2.38
SRPK1-203ENST00000373821 C4AP0C0L4 1744 aa0.17□□□□□ -2.38
SRPK1-203ENST00000373821 C4BP0C0L5 1744 aa0.17□□□□□ -2.38
SRPK1-203ENST00000373821 SMIM13P0DJ93 91 aa0.17□□□□□ -2.38
SRPK1-203ENST00000373821 HMGA1P17096 107 aaKnown RBP0.17□□□□□ -2.38
SRPK1-203ENST00000373821 C18orf32Q8TCD1 76 aa0.17□□□□□ -2.38
SRPK1-203ENST00000373821 LRP2P98164 4655 aa0.17□□□□□ -2.38
SRPK1-203ENST00000373821 ALMS1Q8TCU4 4167 aa0.16□□□□□ -2.38
SRPK1-203ENST00000373821 CRYBG3Q68DQ2 2970 aa0.16□□□□□ -2.38
SRPK1-203ENST00000373821 LAMA1P25391 3075 aa0.16□□□□□ -2.38
SRPK1-203ENST00000373821 LRP1BQ9NZR2 4599 aa0.16□□□□□ -2.38
SRPK1-203ENST00000373821 CNOT1A5YKK6 2376 aaKnown RBP0.16□□□□□ -2.38
SRPK1-203ENST00000373821 CCDC88BA6NC98 1476 aa0.16□□□□□ -2.38
SRPK1-203ENST00000373821 PARP4Q9UKK3 1724 aaKnown RBP0.16□□□□□ -2.38
SRPK1-203ENST00000373821 ADAMTS12P58397 1594 aa0.15□□□□□ -2.38
SRPK1-203ENST00000373821 FREM2Q5SZK8 3169 aa0.15□□□□□ -2.39
SRPK1-203ENST00000373821 ANKARQ7Z5J8 1434 aa0.15□□□□□ -2.39
SRPK1-203ENST00000373821 LCE6AA0A183 80 aa0.15□□□□□ -2.39
SRPK1-203ENST00000373821 CEP290O15078 2479 aa0.14□□□□□ -2.39
SRPK1-203ENST00000373821 CLIP1P30622 1438 aa0.14□□□□□ -2.39
SRPK1-203ENST00000373821 SPTA1P02549 2419 aa0.14□□□□□ -2.39
SRPK1-203ENST00000373821 UTRNP46939 3433 aa0.14□□□□□ -2.39
SRPK1-203ENST00000373821 EIF2AK4Q9P2K8 1649 aaKnown RBP0.14□□□□□ -2.39
SRPK1-203ENST00000373821 NDUFA3O95167 84 aa0.14□□□□□ -2.39
SRPK1-203ENST00000373821 NREPQ16612 68 aa0.14□□□□□ -2.39
SRPK1-203ENST00000373821 ATP5EP2Q5VTU8 51 aa0.14□□□□□ -2.39
SRPK1-203ENST00000373821 HEPN1Q6WQI6 88 aa0.14□□□□□ -2.39
SRPK1-203ENST00000373821 DNAH14Q0VDD8 3507 aa0.14□□□□□ -2.39
SRPK1-203ENST00000373821 MYO15AQ9UKN7 3530 aa0.14□□□□□ -2.39
SRPK1-203ENST00000373821 KNL1Q8NG31 2342 aa0.14□□□□□ -2.39
SRPK1-203ENST00000373821 HSPG2P98160 4391 aa0.13□□□□□ -2.39
SRPK1-203ENST00000373821 UGGT2Q9NYU1 1516 aa0.13□□□□□ -2.39
SRPK1-203ENST00000373821 ITSN1Q15811 1721 aa0.13□□□□□ -2.39
SRPK1-203ENST00000373821 DMXL2Q8TDJ6 3036 aa0.13□□□□□ -2.39
SRPK1-203ENST00000373821 UMAD1C9J7I0 102 aa0.13□□□□□ -2.39
SRPK1-203ENST00000373821 WFDC13Q8IUB5 93 aa0.13□□□□□ -2.39
SRPK1-203ENST00000373821 DNMBPQ6XZF7 1577 aa0.13□□□□□ -2.39
SRPK1-203ENST00000373821 WIZO95785 1651 aa0.12□□□□□ -2.39
SRPK1-203ENST00000373821 A0A087WXM4 84 aa0.12□□□□□ -2.39
SRPK1-203ENST00000373821 CCL22O00626 93 aa0.12□□□□□ -2.39
SRPK1-203ENST00000373821 NDUFB1O75438 58 aa0.12□□□□□ -2.39
SRPK1-203ENST00000373821 IFI27P40305 119 aaPredicted RBP0.12□□□□□ -2.39
SRPK1-203ENST00000373821 SRRM2Q9UQ35 2752 aaKnown RBP0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms