RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 COL6A5A8TX70 2615 aa-0.76□□□□□ -2.53
RNU6-28P-201ENST00000362378 KANTRA0A1W2PQU2 76 aa-0.76□□□□□ -2.53
RNU6-28P-201ENST00000362378 PRO3102Q9H379 93 aa-0.76□□□□□ -2.53
RNU6-28P-201ENST00000362378 DIP2BQ9P265 1576 aa-0.76□□□□□ -2.53
RNU6-28P-201ENST00000362378 PIK3C2BO00750 1634 aa-0.76□□□□□ -2.53
RNU6-28P-201ENST00000362378 WIZO95785 1651 aa-0.76□□□□□ -2.53
RNU6-28P-201ENST00000362378 MXRA5Q9NR99 2828 aa-0.77□□□□□ -2.53
RNU6-28P-201ENST00000362378 CCDC88BA6NC98 1476 aa-0.77□□□□□ -2.53
RNU6-28P-201ENST00000362378 GNG2P59768 71 aa-0.77□□□□□ -2.53
RNU6-28P-201ENST00000362378 ARFGEF2Q9Y6D5 1785 aa-0.78□□□□□ -2.53
RNU6-28P-201ENST00000362378 LCE6AA0A183 80 aa-0.78□□□□□ -2.53
RNU6-28P-201ENST00000362378 FAT1Q14517 4588 aa-0.78□□□□□ -2.53
RNU6-28P-201ENST00000362378 CELSR3Q9NYQ7 3312 aa-0.78□□□□□ -2.53
RNU6-28P-201ENST00000362378 STARD9Q9P2P6 4700 aa-0.78□□□□□ -2.53
RNU6-28P-201ENST00000362378 LINC00158P58513 81 aa-0.79□□□□□ -2.54
RNU6-28P-201ENST00000362378 DSPP15924 2871 aaKnown RBP-0.79□□□□□ -2.54
RNU6-28P-201ENST00000362378 NBPF19A0A087WUL8 3843 aa-0.8□□□□□ -2.54
RNU6-28P-201ENST00000362378 UMAD1C9J7I0 102 aa-0.8□□□□□ -2.54
RNU6-28P-201ENST00000362378 RB1CC1Q8TDY2 1594 aa-0.8□□□□□ -2.54
RNU6-28P-201ENST00000362378 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.8□□□□□ -2.54
RNU6-28P-201ENST00000362378 KRTAP19-6Q3LI70 58 aa-0.81□□□□□ -2.54
RNU6-28P-201ENST00000362378 SCN11AQ9UI33 1791 aa-0.81□□□□□ -2.54
RNU6-28P-201ENST00000362378 MED14O60244 1454 aa-0.81□□□□□ -2.54
RNU6-28P-201ENST00000362378 DEPDC5O75140 1603 aa-0.82□□□□□ -2.54
RNU6-28P-201ENST00000362378 PKHD1L1Q86WI1 4243 aa-0.82□□□□□ -2.54
RNU6-28P-201ENST00000362378 IFI6P09912 130 aa-0.82□□□□□ -2.54
RNU6-28P-201ENST00000362378 IFI27P40305 119 aaPredicted RBP-0.82□□□□□ -2.54
RNU6-28P-201ENST00000362378 ATP5EP2Q5VTU8 51 aa-0.82□□□□□ -2.54
RNU6-28P-201ENST00000362378 AKAP9Q99996 3911 aa-0.83□□□□□ -2.54
RNU6-28P-201ENST00000362378 SMARCA2P51531 1590 aa-0.83□□□□□ -2.54
RNU6-28P-201ENST00000362378 SPG11Q96JI7 2443 aa-0.84□□□□□ -2.54
RNU6-28P-201ENST00000362378 H0YAA0 97 aa-0.84□□□□□ -2.54
RNU6-28P-201ENST00000362378 MT1AP04731 61 aa-0.84□□□□□ -2.54
RNU6-28P-201ENST00000362378 DEFB121Q5J5C9 76 aa-0.84□□□□□ -2.54
RNU6-28P-201ENST00000362378 SPRR2FQ96RM1 72 aa-0.84□□□□□ -2.54
RNU6-28P-201ENST00000362378 ST20Q9HBF5 79 aa-0.84□□□□□ -2.54
RNU6-28P-201ENST00000362378 HTTP42858 3142 aa-0.84□□□□□ -2.54
RNU6-28P-201ENST00000362378 EPG5Q9HCE0 2579 aa-0.85□□□□□ -2.54
RNU6-28P-201ENST00000362378 DNAH3Q8TD57 4116 aa-0.85□□□□□ -2.55
RNU6-28P-201ENST00000362378 ANK3Q12955 4377 aaKnown RBP-0.85□□□□□ -2.55
RNU6-28P-201ENST00000362378 VPS13BQ7Z7G8 4022 aa-0.86□□□□□ -2.55
RNU6-28P-201ENST00000362378 ZZEF1O43149 2961 aa-0.86□□□□□ -2.55
RNU6-28P-201ENST00000362378 CUBNO60494 3623 aa-0.86□□□□□ -2.55
RNU6-28P-201ENST00000362378 VPS13DQ5THJ4 4388 aa-0.87□□□□□ -2.55
RNU6-28P-201ENST00000362378 C9orf92A6NGG3 77 aa-0.87□□□□□ -2.55
RNU6-28P-201ENST00000362378 H3BNG1 76 aa-0.87□□□□□ -2.55
RNU6-28P-201ENST00000362378 NDUFA4O00483 81 aa-0.87□□□□□ -2.55
RNU6-28P-201ENST00000362378 ADIRFQ15847 76 aa-0.87□□□□□ -2.55
RNU6-28P-201ENST00000362378 NREPQ16612 68 aa-0.87□□□□□ -2.55
RNU6-28P-201ENST00000362378 PLCH1Q4KWH8 1693 aa-0.88□□□□□ -2.55
RNU6-28P-201ENST00000362378 DCAF1Q9Y4B6 1507 aa-0.88□□□□□ -2.55
RNU6-28P-201ENST00000362378 DDX60LQ5H9U9 1706 aaKnown RBP-0.88□□□□□ -2.55
RNU6-28P-201ENST00000362378 LYNX1G3V0Z9 82 aa-0.88□□□□□ -2.55
RNU6-28P-201ENST00000362378 S100A13Q99584 98 aa-0.88□□□□□ -2.55
RNU6-28P-201ENST00000362378 TACC2O95359 2948 aa-0.88□□□□□ -2.55
RNU6-28P-201ENST00000362378 CFAP43Q8NDM7 1665 aa-0.88□□□□□ -2.55
RNU6-28P-201ENST00000362378 COL12A1Q99715 3063 aa-0.88□□□□□ -2.55
RNU6-28P-201ENST00000362378 APOBP04114 4563 aaKnown RBP-0.89□□□□□ -2.55
RNU6-28P-201ENST00000362378 NIPBLQ6KC79 2804 aaeCLIP-0.89□□□□□ -2.55
RNU6-28P-201ENST00000362378 USP9XQ93008 2570 aaPredicted RBP-0.9□□□□□ -2.55
RNU6-28P-201ENST00000362378 DMXL1Q9Y485 3027 aa-0.9□□□□□ -2.55
RNU6-28P-201ENST00000362378 HMGA1P17096 107 aaKnown RBP-0.9□□□□□ -2.55
RNU6-28P-201ENST00000362378 MYO18BQ8IUG5 2567 aa-0.91□□□□□ -2.55
RNU6-28P-201ENST00000362378 ABCC1P33527 1531 aa-0.91□□□□□ -2.56
RNU6-28P-201ENST00000362378 KDM5DQ9BY66 1539 aa-0.91□□□□□ -2.56
RNU6-28P-201ENST00000362378 ERVK-7P63135 1459 aa-0.92□□□□□ -2.56
RNU6-28P-201ENST00000362378 CCDC18Q5T9S5 1454 aa-0.92□□□□□ -2.56
RNU6-28P-201ENST00000362378 DNHD1Q96M86 4753 aa-0.92□□□□□ -2.56
RNU6-28P-201ENST00000362378 A0A087WXM4 84 aa-0.92□□□□□ -2.56
RNU6-28P-201ENST00000362378 H3BUT2 72 aa-0.92□□□□□ -2.56
RNU6-28P-201ENST00000362378 SMIM13P0DJ93 91 aa-0.92□□□□□ -2.56
RNU6-28P-201ENST00000362378 DEFA5Q01523 94 aa-0.92□□□□□ -2.56
RNU6-28P-201ENST00000362378 MUC17Q685J3 4493 aa-0.92□□□□□ -2.56
RNU6-28P-201ENST00000362378 USP9YO00507 2555 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-28P-201ENST00000362378 ANKRD11Q6UB99 2663 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-28P-201ENST00000362378 BIRC6Q9NR09 4857 aa-0.93□□□□□ -2.56
RNU6-28P-201ENST00000362378 PRLHP81277 87 aa-0.93□□□□□ -2.56
RNU6-28P-201ENST00000362378 RICTORQ6R327 1708 aa-0.93□□□□□ -2.56
RNU6-28P-201ENST00000362378 FASNP49327 2511 aaKnown RBP-0.93□□□□□ -2.56
RNU6-28P-201ENST00000362378 THOC2Q8NI27 1593 aaKnown RBP-0.94□□□□□ -2.56
RNU6-28P-201ENST00000362378 CFAP74Q9C0B2 1584 aa-0.94□□□□□ -2.56
RNU6-28P-201ENST00000362378 ANKRD50Q9ULJ7 1429 aa-0.94□□□□□ -2.56
RNU6-28P-201ENST00000362378 MAP3K1Q13233 1512 aa-0.94□□□□□ -2.56
RNU6-28P-201ENST00000362378 RIF1Q5UIP0 2472 aaKnown RBP-0.95□□□□□ -2.56
RNU6-28P-201ENST00000362378 WDR87Q6ZQQ6 2873 aa-0.95□□□□□ -2.56
RNU6-28P-201ENST00000362378 DEFB130BP0DP73 79 aa-0.95□□□□□ -2.56
RNU6-28P-201ENST00000362378 DEFB130AP0DP74 79 aa-0.95□□□□□ -2.56
RNU6-28P-201ENST00000362378 BVES-AS1Q5T3Y7 98 aa-0.95□□□□□ -2.56
RNU6-28P-201ENST00000362378 ITSN1Q15811 1721 aa-0.95□□□□□ -2.56
RNU6-28P-201ENST00000362378 DNAH11Q96DT5 4516 aa-0.96□□□□□ -2.56
RNU6-28P-201ENST00000362378 DEFB131BA0A096LNP1 70 aa-0.96□□□□□ -2.56
RNU6-28P-201ENST00000362378 IAPPP10997 89 aa-0.96□□□□□ -2.56
RNU6-28P-201ENST00000362378 LAMA1P25391 3075 aa-0.97□□□□□ -2.56
RNU6-28P-201ENST00000362378 CD163L1Q9NR16 1453 aa-0.97□□□□□ -2.56
RNU6-28P-201ENST00000362378 GCN1Q92616 2671 aaKnown RBP-0.98□□□□□ -2.57
RNU6-28P-201ENST00000362378 LAMA3Q16787 3333 aa-0.98□□□□□ -2.57
RNU6-28P-201ENST00000362378 ARHGAP35Q9NRY4 1499 aa-0.99□□□□□ -2.57
RNU6-28P-201ENST00000362378 RNF17Q9BXT8 1623 aaKnown RBP-1□□□□□ -2.57
RNU6-28P-201ENST00000362378 EIF2AK4Q9P2K8 1649 aaKnown RBP-1□□□□□ -2.57
RNU6-28P-201ENST00000362378 ZC3H13Q5T200 1668 aaKnown RBP-1□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms