RNA–Protein interactions for RNA: ENST00000358933.9

EDC4-201, Transcript of enhancer of mRNA decapping 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC4, Length 4,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-201ENST00000358933 CHD9Q3L8U1 2897 aa12.5□□□□□ -0.41
EDC4-201ENST00000358933 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.49□□□□□ -0.41
EDC4-201ENST00000358933 UNC79Q9P2D8 2635 aa12.47□□□□□ -0.41
EDC4-201ENST00000358933 ASB16-AS1Q495Z4 193 aa12.47□□□□□ -0.41
EDC4-201ENST00000358933 LAMA2P24043 3122 aaKnown RBP12.46□□□□□ -0.41
EDC4-201ENST00000358933 KRTAP29-1A8MX34 341 aaPredicted RBP12.45□□□□□ -0.42
EDC4-201ENST00000358933 WWC2-AS2Q96NR7 200 aa12.45□□□□□ -0.42
EDC4-201ENST00000358933 KRTAP26-1Q6PEX3 210 aa12.44□□□□□ -0.42
EDC4-201ENST00000358933 DMAC1Q96GE9 116 aa12.44□□□□□ -0.42
EDC4-201ENST00000358933 GCN1Q92616 2671 aaKnown RBP12.44□□□□□ -0.42
EDC4-201ENST00000358933 Q6ZR54 194 aa12.39□□□□□ -0.43
EDC4-201ENST00000358933 KRTAP4-16G5E9R7 235 aaPredicted RBP12.36□□□□□ -0.43
EDC4-201ENST00000358933 NBEAL1Q6ZS30 2694 aa12.36□□□□□ -0.43
EDC4-201ENST00000358933 SMR3BP02814 79 aaPredicted RBP12.35□□□□□ -0.43
EDC4-201ENST00000358933 A6NN06 94 aa12.34□□□□□ -0.43
EDC4-201ENST00000358933 NOTCH1P46531 2555 aa12.33□□□□□ -0.44
EDC4-201ENST00000358933 MGAQ8IWI9 3026 aa12.33□□□□□ -0.44
EDC4-201ENST00000358933 LCE6AA0A183 80 aa12.32□□□□□ -0.44
EDC4-201ENST00000358933 HTTP42858 3142 aa12.3□□□□□ -0.44
EDC4-201ENST00000358933 PLAC8Q9NZF1 115 aa12.3□□□□□ -0.44
EDC4-201ENST00000358933 CFAP46Q8IYW2 2715 aa12.27□□□□□ -0.45
EDC4-201ENST00000358933 RANBP2P49792 3224 aaKnown RBP12.26□□□□□ -0.45
EDC4-201ENST00000358933 COX6B2Q6YFQ2 88 aa12.24□□□□□ -0.45
EDC4-201ENST00000358933 SPATA8Q6RVD6 105 aa12.24□□□□□ -0.45
EDC4-201ENST00000358933 NBEAL2Q6ZNJ1 2754 aa12.23□□□□□ -0.45
EDC4-201ENST00000358933 STAB1Q9NY15 2570 aa12.22□□□□□ -0.45
EDC4-201ENST00000358933 TRANK1O15050 2925 aa12.21□□□□□ -0.45
EDC4-201ENST00000358933 FLG2Q5D862 2391 aaPredicted RBP12.2□□□□□ -0.46
EDC4-201ENST00000358933 ROMO1P60602 79 aa12.2□□□□□ -0.46
EDC4-201ENST00000358933 RPL37P61927 97 aaKnown RBP12.19□□□□□ -0.46
EDC4-201ENST00000358933 MAP1AP78559 2803 aaPredicted RBP12.17□□□□□ -0.46
EDC4-201ENST00000358933 A0A0A0MQY5 61 aa12.17□□□□□ -0.46
EDC4-201ENST00000358933 HELZ2Q9BYK8 2649 aaKnown RBP12.16□□□□□ -0.46
EDC4-201ENST00000358933 FRYQ5TBA9 3013 aa12.15□□□□□ -0.46
EDC4-201ENST00000358933 FREM2Q5SZK8 3169 aa12.14□□□□□ -0.47
EDC4-201ENST00000358933 LINC00483Q53H64 154 aa12.13□□□□□ -0.47
EDC4-201ENST00000358933 KRTAP1-5Q9BYS1 174 aa12.13□□□□□ -0.47
EDC4-201ENST00000358933 MKI67P46013 3256 aaKnown RBP12.13□□□□□ -0.47
EDC4-201ENST00000358933 TRIOO75962 3097 aa12.13□□□□□ -0.47
EDC4-201ENST00000358933 A8MU10 97 aa12.13□□□□□ -0.47
EDC4-201ENST00000358933 H1FX-AS1Q4G0G2 97 aa12.13□□□□□ -0.47
EDC4-201ENST00000358933 WDFY4Q6ZS81 3184 aa12.12□□□□□ -0.47
EDC4-201ENST00000358933 DMBT1Q9UGM3 2413 aaPredicted RBP12.11□□□□□ -0.47
EDC4-201ENST00000358933 TEX15Q9BXT5 2789 aa12.1□□□□□ -0.47
EDC4-201ENST00000358933 COL6A5A8TX70 2615 aa12.1□□□□□ -0.47
EDC4-201ENST00000358933 CAMK2N1Q7Z7J9 78 aa12.1□□□□□ -0.47
EDC4-201ENST00000358933 S4R3F8 94 aa12.05□□□□□ -0.48
EDC4-201ENST00000358933 NBEAQ8NFP9 2946 aa12.03□□□□□ -0.48
EDC4-201ENST00000358933 VPS13AQ96RL7 3174 aa12.02□□□□□ -0.49
EDC4-201ENST00000358933 Q6ZSA8 131 aa12.02□□□□□ -0.49
EDC4-201ENST00000358933 LAMA3Q16787 3333 aa12.02□□□□□ -0.49
EDC4-201ENST00000358933 ADM2Q7Z4H4 148 aa12.01□□□□□ -0.49
EDC4-201ENST00000358933 DSPP15924 2871 aaKnown RBP12.01□□□□□ -0.49
EDC4-201ENST00000358933 ZNF292O60281 2723 aa12.01□□□□□ -0.49
EDC4-201ENST00000358933 A0A087X002 238 aa12□□□□□ -0.49
EDC4-201ENST00000358933 NOTCH2NLQ7Z3S9 236 aa12□□□□□ -0.49
EDC4-201ENST00000358933 J3QL48 77 aa11.98□□□□□ -0.49
EDC4-201ENST00000358933 KRTAP25-1Q3LHN0 102 aa11.98□□□□□ -0.49
EDC4-201ENST00000358933 BRCA2P51587 3418 aa11.98□□□□□ -0.49
EDC4-201ENST00000358933 TEP1Q99973 2627 aaKnown RBP11.97□□□□□ -0.49
EDC4-201ENST00000358933 KALRNO60229 2985 aa11.92□□□□□ -0.5
EDC4-201ENST00000358933 ITPR1Q14643 2758 aa11.92□□□□□ -0.5
EDC4-201ENST00000358933 PANO1I0J062 215 aa11.9□□□□□ -0.5
EDC4-201ENST00000358933 UBR5O95071 2799 aaPredicted RBP11.88□□□□□ -0.51
EDC4-201ENST00000358933 SETXQ7Z333 2677 aaKnown RBP11.88□□□□□ -0.51
EDC4-201ENST00000358933 KRTAP16-1A8MUX0 517 aa11.87□□□□□ -0.51
EDC4-201ENST00000358933 R4GN34 69 aa11.86□□□□□ -0.51
EDC4-201ENST00000358933 UNC80Q8N2C7 3258 aa11.86□□□□□ -0.51
EDC4-201ENST00000358933 BAHCC1Q9P281 2608 aa11.86□□□□□ -0.51
EDC4-201ENST00000358933 KRTAP7-1Q8IUC3 87 aa11.85□□□□□ -0.51
EDC4-201ENST00000358933 STAB2Q8WWQ8 2551 aa11.83□□□□□ -0.52
EDC4-201ENST00000358933 XIRP2A4UGR9 3374 aa11.8□□□□□ -0.52
EDC4-201ENST00000358933 KRTAP11-1Q8IUC1 163 aa11.8□□□□□ -0.52
EDC4-201ENST00000358933 PRUNE2Q8WUY3 3088 aa11.79□□□□□ -0.52
EDC4-201ENST00000358933 CELSR3Q9NYQ7 3312 aa11.7□□□□□ -0.54
EDC4-201ENST00000358933 ASH1LQ9NR48 2969 aaKnown RBP11.68□□□□□ -0.54
EDC4-201ENST00000358933 M0QZ58 72 aa11.66□□□□□ -0.54
EDC4-201ENST00000358933 NSD1Q96L73 2696 aaPredicted RBP11.65□□□□□ -0.54
EDC4-201ENST00000358933 NDUFAF8A1L188 74 aa11.65□□□□□ -0.54
EDC4-201ENST00000358933 KRTAP10-1P60331 282 aa11.65□□□□□ -0.54
EDC4-201ENST00000358933 KRTAP10-2P60368 255 aa11.62□□□□□ -0.55
EDC4-201ENST00000358933 KRTAP13-1Q8IUC0 172 aa11.62□□□□□ -0.55
EDC4-201ENST00000358933 DMXL2Q8TDJ6 3036 aa11.61□□□□□ -0.55
EDC4-201ENST00000358933 ADGRG4Q8IZF6 3080 aa11.57□□□□□ -0.56
EDC4-201ENST00000358933 APCP25054 2843 aa11.56□□□□□ -0.56
EDC4-201ENST00000358933 IGSF10Q6WRI0 2623 aa11.51□□□□□ -0.57
EDC4-201ENST00000358933 A8MUU9 505 aa11.51□□□□□ -0.57
EDC4-201ENST00000358933 TACC2O95359 2948 aa11.51□□□□□ -0.57
EDC4-201ENST00000358933 LAMA1P25391 3075 aa11.5□□□□□ -0.57
EDC4-201ENST00000358933 Q6ZRN7 208 aaPredicted RBP11.46□□□□□ -0.57
EDC4-201ENST00000358933 VCANP13611 3396 aa11.46□□□□□ -0.58
EDC4-201ENST00000358933 ATMQ13315 3056 aa11.46□□□□□ -0.58
EDC4-201ENST00000358933 RPS29P62273 56 aaKnown RBP11.44□□□□□ -0.58
EDC4-201ENST00000358933 LRBAP50851 2863 aa11.44□□□□□ -0.58
EDC4-201ENST00000358933 KRTAP13-2Q52LG2 175 aa11.41□□□□□ -0.58
EDC4-201ENST00000358933 SEC61BP60468 96 aaKnown RBP11.4□□□□□ -0.58
EDC4-201ENST00000358933 FLNCQ14315 2725 aa11.4□□□□□ -0.58
EDC4-201ENST00000358933 UTP20O75691 2785 aaKnown RBP11.4□□□□□ -0.58
EDC4-201ENST00000358933 CDH23Q9H251 3354 aa11.4□□□□□ -0.59
EDC4-201ENST00000358933 DNAH14Q0VDD8 3507 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms