RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 M0QZ58 72 aa9.95□□□□□ -0.82
SATB1-201ENST00000338745 DNAH14Q0VDD8 3507 aa9.93□□□□□ -0.82
SATB1-201ENST00000338745 PRRC2CQ9Y520 2896 aaKnown RBP9.92□□□□□ -0.82
SATB1-201ENST00000338745 USP9YO00507 2555 aaPredicted RBP9.92□□□□□ -0.82
SATB1-201ENST00000338745 KRTAP1-5Q9BYS1 174 aa9.92□□□□□ -0.82
SATB1-201ENST00000338745 SPTBN4Q9H254 2564 aa9.91□□□□□ -0.82
SATB1-201ENST00000338745 CFAP54Q96N23 3096 aa9.89□□□□□ -0.83
SATB1-201ENST00000338745 Q6ZR54 194 aa9.89□□□□□ -0.83
SATB1-201ENST00000338745 MTORP42345 2549 aa9.88□□□□□ -0.83
SATB1-201ENST00000338745 Q5VSD8 79 aa9.87□□□□□ -0.83
SATB1-201ENST00000338745 A0A0C4DFX4 3053 aa9.85□□□□□ -0.83
SATB1-201ENST00000338745 KRTAP10-1P60331 282 aa9.83□□□□□ -0.84
SATB1-201ENST00000338745 KRTAP10-2P60368 255 aa9.82□□□□□ -0.84
SATB1-201ENST00000338745 PIEZO1Q92508 2521 aa9.82□□□□□ -0.84
SATB1-201ENST00000338745 SEC61BP60468 96 aaKnown RBP9.81□□□□□ -0.84
SATB1-201ENST00000338745 BRCA2P51587 3418 aa9.77□□□□□ -0.85
SATB1-201ENST00000338745 CELSR3Q9NYQ7 3312 aa9.77□□□□□ -0.85
SATB1-201ENST00000338745 PLAC4Q8WY50 150 aa9.76□□□□□ -0.85
SATB1-201ENST00000338745 PANO1I0J062 215 aa9.75□□□□□ -0.85
SATB1-201ENST00000338745 ASB16-AS1Q495Z4 193 aa9.74□□□□□ -0.85
SATB1-201ENST00000338745 KRTAP29-1A8MX34 341 aaPredicted RBP9.74□□□□□ -0.85
SATB1-201ENST00000338745 CEP295Q9C0D2 2601 aa9.74□□□□□ -0.85
SATB1-201ENST00000338745 KRTAP4-16G5E9R7 235 aaPredicted RBP9.73□□□□□ -0.85
SATB1-201ENST00000338745 CHD7Q9P2D1 2997 aa9.73□□□□□ -0.85
SATB1-201ENST00000338745 A0A087X002 238 aa9.73□□□□□ -0.85
SATB1-201ENST00000338745 NOTCH2NLQ7Z3S9 236 aa9.73□□□□□ -0.85
SATB1-201ENST00000338745 LAMA2P24043 3122 aaKnown RBP9.71□□□□□ -0.86
SATB1-201ENST00000338745 FASNP49327 2511 aaKnown RBP9.71□□□□□ -0.86
SATB1-201ENST00000338745 TRIOO75962 3097 aa9.7□□□□□ -0.86
SATB1-201ENST00000338745 KRTAP16-1A8MUX0 517 aa9.7□□□□□ -0.86
SATB1-201ENST00000338745 A8MU10 97 aa9.69□□□□□ -0.86
SATB1-201ENST00000338745 KRTAP25-1Q3LHN0 102 aa9.69□□□□□ -0.86
SATB1-201ENST00000338745 A6NN06 94 aa9.67□□□□□ -0.86
SATB1-201ENST00000338745 C20orf166-AS1Q96NR2 134 aa9.62□□□□□ -0.87
SATB1-201ENST00000338745 UNC80Q8N2C7 3258 aa9.6□□□□□ -0.87
SATB1-201ENST00000338745 RANBP2P49792 3224 aaKnown RBP9.59□□□□□ -0.87
SATB1-201ENST00000338745 CDH23Q9H251 3354 aa9.58□□□□□ -0.88
SATB1-201ENST00000338745 KRTAP11-1Q8IUC1 163 aa9.58□□□□□ -0.88
SATB1-201ENST00000338745 REV3LO60673 3130 aa9.58□□□□□ -0.88
SATB1-201ENST00000338745 USP24Q9UPU5 2620 aa9.55□□□□□ -0.88
SATB1-201ENST00000338745 SZT2Q5T011 3432 aa9.55□□□□□ -0.88
SATB1-201ENST00000338745 A8MUU9 505 aa9.52□□□□□ -0.88
SATB1-201ENST00000338745 LCE6AA0A183 80 aa9.51□□□□□ -0.89
SATB1-201ENST00000338745 FLNAP21333 2647 aaKnown RBP9.5□□□□□ -0.89
SATB1-201ENST00000338745 NDUFAF8A1L188 74 aa9.5□□□□□ -0.89
SATB1-201ENST00000338745 ITPR3Q14573 2671 aa9.45□□□□□ -0.9
SATB1-201ENST00000338745 HTTP42858 3142 aa9.45□□□□□ -0.9
SATB1-201ENST00000338745 LAMA3Q16787 3333 aa9.45□□□□□ -0.9
SATB1-201ENST00000338745 COL6A3P12111 3177 aa9.43□□□□□ -0.9
SATB1-201ENST00000338745 FREM2Q5SZK8 3169 aa9.42□□□□□ -0.9
SATB1-201ENST00000338745 KRTAP7-1Q8IUC3 87 aa9.4□□□□□ -0.9
SATB1-201ENST00000338745 VPS13AQ96RL7 3174 aa9.39□□□□□ -0.91
SATB1-201ENST00000338745 C10orf95Q9H7T3 257 aa9.34□□□□□ -0.91
SATB1-201ENST00000338745 PRUNE2Q8WUY3 3088 aa9.34□□□□□ -0.91
SATB1-201ENST00000338745 MGAQ8IWI9 3026 aa9.33□□□□□ -0.92
SATB1-201ENST00000338745 RPS29P62273 56 aaKnown RBP9.32□□□□□ -0.92
SATB1-201ENST00000338745 KRTAP13-2Q52LG2 175 aa9.3□□□□□ -0.92
SATB1-201ENST00000338745 FLG2Q5D862 2391 aaPredicted RBP9.29□□□□□ -0.92
SATB1-201ENST00000338745 CHD9Q3L8U1 2897 aa9.27□□□□□ -0.93
SATB1-201ENST00000338745 VCANP13611 3396 aa9.27□□□□□ -0.93
SATB1-201ENST00000338745 Q6ZRN7 208 aaPredicted RBP9.26□□□□□ -0.93
SATB1-201ENST00000338745 SPTBN5Q9NRC6 3674 aaKnown RBP9.26□□□□□ -0.93
SATB1-201ENST00000338745 FRYQ5TBA9 3013 aa9.25□□□□□ -0.93
SATB1-201ENST00000338745 EPG5Q9HCE0 2579 aa9.25□□□□□ -0.93
SATB1-201ENST00000338745 ATRQ13535 2644 aa9.22□□□□□ -0.93
SATB1-201ENST00000338745 KRTAP13-1Q8IUC0 172 aa9.22□□□□□ -0.93
SATB1-201ENST00000338745 CHD6Q8TD26 2715 aa9.21□□□□□ -0.93
SATB1-201ENST00000338745 TRANK1O15050 2925 aa9.21□□□□□ -0.93
SATB1-201ENST00000338745 MGAM2Q2M2H8 2515 aa9.21□□□□□ -0.94
SATB1-201ENST00000338745 TNP1P09430 55 aa9.2□□□□□ -0.94
SATB1-201ENST00000338745 LAMA1P25391 3075 aa9.2□□□□□ -0.94
SATB1-201ENST00000338745 USP34Q70CQ2 3546 aa9.2□□□□□ -0.94
SATB1-201ENST00000338745 WDFY4Q6ZS81 3184 aa9.19□□□□□ -0.94
SATB1-201ENST00000338745 AKAP13Q12802 2813 aa9.19□□□□□ -0.94
SATB1-201ENST00000338745 HECTD1Q9ULT8 2610 aa9.18□□□□□ -0.94
SATB1-201ENST00000338745 KALRNO60229 2985 aa9.15□□□□□ -0.94
SATB1-201ENST00000338745 CFAP46Q8IYW2 2715 aa9.14□□□□□ -0.95
SATB1-201ENST00000338745 CENPEQ02224 2701 aa9.12□□□□□ -0.95
SATB1-201ENST00000338745 LRBAP50851 2863 aa9.1□□□□□ -0.95
SATB1-201ENST00000338745 DMBT1Q9UGM3 2413 aaPredicted RBP9.1□□□□□ -0.95
SATB1-201ENST00000338745 GCN1Q92616 2671 aaKnown RBP9.07□□□□□ -0.96
SATB1-201ENST00000338745 NBEAL1Q6ZS30 2694 aa9.07□□□□□ -0.96
SATB1-201ENST00000338745 SPEGQ15772 3267 aa9.01□□□□□ -0.97
SATB1-201ENST00000338745 TEX15Q9BXT5 2789 aa9□□□□□ -0.97
SATB1-201ENST00000338745 CFAP47Q6ZTR5 3102 aa8.99□□□□□ -0.97
SATB1-201ENST00000338745 MAST4O15021 2626 aa8.99□□□□□ -0.97
SATB1-201ENST00000338745 H0YAA0 97 aa8.98□□□□□ -0.97
SATB1-201ENST00000338745 HELZ2Q9BYK8 2649 aaKnown RBP8.98□□□□□ -0.97
SATB1-201ENST00000338745 NBEAL2Q6ZNJ1 2754 aa8.98□□□□□ -0.97
SATB1-201ENST00000338745 DCHS1Q96JQ0 3298 aa8.96□□□□□ -0.97
SATB1-201ENST00000338745 A0A1B0GVY2 172 aa8.96□□□□□ -0.97
SATB1-201ENST00000338745 KMT2BQ9UMN6 2715 aaPredicted RBP8.96□□□□□ -0.97
SATB1-201ENST00000338745 MYO15AQ9UKN7 3530 aa8.96□□□□□ -0.98
SATB1-201ENST00000338745 DSPP15924 2871 aaKnown RBP8.93□□□□□ -0.98
SATB1-201ENST00000338745 KRTAP10-8P60410 259 aa8.93□□□□□ -0.98
SATB1-201ENST00000338745 ASPMQ8IZT6 3477 aa8.91□□□□□ -0.98
SATB1-201ENST00000338745 WDFY3Q8IZQ1 3526 aa8.91□□□□□ -0.98
SATB1-201ENST00000338745 APCP25054 2843 aa8.9□□□□□ -0.98
SATB1-201ENST00000338745 FRYLO94915 3013 aa8.89□□□□□ -0.99
SATB1-201ENST00000338745 ZZEF1O43149 2961 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms