RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 COX7CP15954 63 aa10.97□□□□□ -0.65
CCDC78-201ENST00000293889 PDE6GP18545 87 aa10.96□□□□□ -0.65
CCDC78-201ENST00000293889 Q6ZQT0 140 aa10.96□□□□□ -0.65
CCDC78-201ENST00000293889 LINC00528Q8N1L1 170 aa10.96□□□□□ -0.65
CCDC78-201ENST00000293889 KRTAP4-16G5E9R7 235 aaPredicted RBP10.95□□□□□ -0.66
CCDC78-201ENST00000293889 GHRHP01286 108 aa10.95□□□□□ -0.66
CCDC78-201ENST00000293889 RBM3P98179 157 aaKnown RBP10.95□□□□□ -0.66
CCDC78-201ENST00000293889 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.95□□□□□ -0.66
CCDC78-201ENST00000293889 DIRC1Q969H9 104 aa10.95□□□□□ -0.66
CCDC78-201ENST00000293889 KRTAP4-5Q9BYR2 181 aa10.95□□□□□ -0.66
CCDC78-201ENST00000293889 IGKV3D-7A0A0C4DH55 119 aa10.95□□□□□ -0.66
CCDC78-201ENST00000293889 BCE1O60756 84 aa10.94□□□□□ -0.66
CCDC78-201ENST00000293889 C1orf137Q5JT78 98 aa10.94□□□□□ -0.66
CCDC78-201ENST00000293889 ELOF1P60002 83 aaKnown RBP10.93□□□□□ -0.66
CCDC78-201ENST00000293889 VPS13BQ7Z7G8 4022 aa10.92□□□□□ -0.66
CCDC78-201ENST00000293889 ETDCA0A1B0GVM5 59 aa10.92□□□□□ -0.66
CCDC78-201ENST00000293889 CRYGAP11844 174 aa10.92□□□□□ -0.66
CCDC78-201ENST00000293889 COX7BP24311 80 aa10.92□□□□□ -0.66
CCDC78-201ENST00000293889 FAM19A1Q7Z5A9 133 aa10.91□□□□□ -0.66
CCDC78-201ENST00000293889 Q5VSD8 79 aa10.91□□□□□ -0.66
CCDC78-201ENST00000293889 RPL37AP61513 92 aaKnown RBP10.9□□□□□ -0.66
CCDC78-201ENST00000293889 C9orf153Q5TBE3 101 aa10.9□□□□□ -0.66
CCDC78-201ENST00000293889 Q6ZQY7 126 aa10.9□□□□□ -0.66
CCDC78-201ENST00000293889 UBL5Q9BZL1 73 aa10.9□□□□□ -0.66
CCDC78-201ENST00000293889 PRLHP81277 87 aa10.89□□□□□ -0.67
CCDC78-201ENST00000293889 UBE2AP49459 152 aa10.88□□□□□ -0.67
CCDC78-201ENST00000293889 Q6ZRX8 168 aa10.88□□□□□ -0.67
CCDC78-201ENST00000293889 SERP2Q8N6R1 65 aa10.88□□□□□ -0.67
CCDC78-201ENST00000293889 FAM229AH3BQW9 127 aa10.87□□□□□ -0.67
CCDC78-201ENST00000293889 IGLV7-43P04211 117 aa10.87□□□□□ -0.67
CCDC78-201ENST00000293889 KRTAP13-1Q8IUC0 172 aa10.87□□□□□ -0.67
CCDC78-201ENST00000293889 LAMTOR3Q9UHA4 124 aa10.87□□□□□ -0.67
CCDC78-201ENST00000293889 SRRM2Q9UQ35 2752 aaKnown RBP10.86□□□□□ -0.67
CCDC78-201ENST00000293889 TRBV7-4A0A0J9YYF1 115 aa10.86□□□□□ -0.67
CCDC78-201ENST00000293889 H0Y9J4 135 aa10.86□□□□□ -0.67
CCDC78-201ENST00000293889 KRTAP10-4P60372 401 aaPredicted RBP10.85□□□□□ -0.67
CCDC78-201ENST00000293889 DSCR8Q96T75 97 aa10.85□□□□□ -0.67
CCDC78-201ENST00000293889 Q9BRP9 147 aa10.85□□□□□ -0.67
CCDC78-201ENST00000293889 A0A087WVE0 104 aa10.84□□□□□ -0.67
CCDC78-201ENST00000293889 ZNF861PO60384 105 aa10.84□□□□□ -0.67
CCDC78-201ENST00000293889 HIGD2AQ9BW72 106 aa10.82□□□□□ -0.68
CCDC78-201ENST00000293889 PLA2G1BP04054 148 aaKnown RBP10.81□□□□□ -0.68
CCDC78-201ENST00000293889 DHRS4-AS1Q9P1J3 65 aa10.8□□□□□ -0.68
CCDC78-201ENST00000293889 ABCA13Q86UQ4 5058 aa10.8□□□□□ -0.68
CCDC78-201ENST00000293889 ERC2-IT1O76042 136 aa10.8□□□□□ -0.68
CCDC78-201ENST00000293889 CXCL6P80162 114 aa10.8□□□□□ -0.68
CCDC78-201ENST00000293889 Q6ZVQ6 151 aa10.79□□□□□ -0.68
CCDC78-201ENST00000293889 LINC01547P58512 204 aaPredicted RBP10.77□□□□□ -0.68
CCDC78-201ENST00000293889 PCLOQ9Y6V0 5065 aa10.75□□□□□ -0.69
CCDC78-201ENST00000293889 ST20-AS1Q8NBB2 130 aa10.73□□□□□ -0.69
CCDC78-201ENST00000293889 SPINK6Q6UWN8 80 aa10.73□□□□□ -0.69
CCDC78-201ENST00000293889 SMIM20Q8N5G0 67 aa10.73□□□□□ -0.69
CCDC78-201ENST00000293889 TMEM258P61165 79 aa10.72□□□□□ -0.69
CCDC78-201ENST00000293889 RPS28P62857 69 aaKnown RBP10.72□□□□□ -0.69
CCDC78-201ENST00000293889 FLG2Q5D862 2391 aaPredicted RBP10.69□□□□□ -0.7
CCDC78-201ENST00000293889 A0A1B0GW54 56 aa10.69□□□□□ -0.7
CCDC78-201ENST00000293889 SVIPQ8NHG7 77 aa10.69□□□□□ -0.7
CCDC78-201ENST00000293889 PKHD1L1Q86WI1 4243 aa10.69□□□□□ -0.7
CCDC78-201ENST00000293889 TRAV7A0A075B6U4 112 aa10.68□□□□□ -0.7
CCDC78-201ENST00000293889 DEFB105AQ8NG35 78 aa10.68□□□□□ -0.7
CCDC78-201ENST00000293889 SPRR4Q96PI1 79 aa10.68□□□□□ -0.7
CCDC78-201ENST00000293889 IGLV5-48A0A075B6I7 105 aa10.67□□□□□ -0.7
CCDC78-201ENST00000293889 CYSTM1Q9H1C7 97 aa10.67□□□□□ -0.7
CCDC78-201ENST00000293889 ZNF706Q9Y5V0 76 aaPredicted RBP10.66□□□□□ -0.7
CCDC78-201ENST00000293889 Q8N377 158 aa10.65□□□□□ -0.7
CCDC78-201ENST00000293889 ANAPC11Q9NYG5 84 aa10.64□□□□□ -0.71
CCDC78-201ENST00000293889 J3KT08 172 aa10.63□□□□□ -0.71
CCDC78-201ENST00000293889 MYCBP2O75592 4640 aa10.63□□□□□ -0.71
CCDC78-201ENST00000293889 LINC00483Q53H64 154 aa10.62□□□□□ -0.71
CCDC78-201ENST00000293889 KRTAP1-4P0C5Y4 121 aa10.62□□□□□ -0.71
CCDC78-201ENST00000293889 SPRR1BP22528 89 aa10.62□□□□□ -0.71
CCDC78-201ENST00000293889 KLKP1Q107X0 134 aa10.58□□□□□ -0.72
CCDC78-201ENST00000293889 LRP1Q07954 4544 aaKnown RBP10.57□□□□□ -0.72
CCDC78-201ENST00000293889 SMIM29Q86T20 159 aa10.57□□□□□ -0.72
CCDC78-201ENST00000293889 NREPQ16612 68 aa10.55□□□□□ -0.72
CCDC78-201ENST00000293889 FAM229BQ4G0N7 80 aa10.55□□□□□ -0.72
CCDC78-201ENST00000293889 A0A087X002 238 aa10.54□□□□□ -0.72
CCDC78-201ENST00000293889 C20orf197Q8N268 126 aa10.54□□□□□ -0.72
CCDC78-201ENST00000293889 IGKV4-1P06312 121 aa10.53□□□□□ -0.72
CCDC78-201ENST00000293889 FAT3Q8TDW7 4589 aa10.52□□□□□ -0.72
CCDC78-201ENST00000293889 IGLV9-49A0A0B4J1Y8 123 aa10.51□□□□□ -0.73
CCDC78-201ENST00000293889 A0A1W2PNM2 257 aa10.51□□□□□ -0.73
CCDC78-201ENST00000293889 Q8NBF4 154 aa10.51□□□□□ -0.73
CCDC78-201ENST00000293889 KRTAP29-1A8MX34 341 aaPredicted RBP10.5□□□□□ -0.73
CCDC78-201ENST00000293889 H7BZZ5 65 aa10.5□□□□□ -0.73
CCDC78-201ENST00000293889 KRTAP13-2Q52LG2 175 aa10.5□□□□□ -0.73
CCDC78-201ENST00000293889 PRR26Q8N8Z3 221 aa10.5□□□□□ -0.73
CCDC78-201ENST00000293889 BPY2O14599 106 aa10.48□□□□□ -0.73
CCDC78-201ENST00000293889 F8WEM9 126 aa10.47□□□□□ -0.73
CCDC78-201ENST00000293889 NDUFC1O43677 76 aa10.47□□□□□ -0.73
CCDC78-201ENST00000293889 OXTP01178 125 aa10.47□□□□□ -0.73
CCDC78-201ENST00000293889 MOBPQ13875 183 aa10.47□□□□□ -0.73
CCDC78-201ENST00000293889 FAM236DA0A1B0GTK5 79 aa10.44□□□□□ -0.74
CCDC78-201ENST00000293889 FAM236CP0DP71 79 aa10.44□□□□□ -0.74
CCDC78-201ENST00000293889 OCR1Q9BZK8 76 aa10.44□□□□□ -0.74
CCDC78-201ENST00000293889 DMBT1Q9UGM3 2413 aaPredicted RBP10.44□□□□□ -0.74
CCDC78-201ENST00000293889 IGLV8-61A0A075B6I0 122 aa10.44□□□□□ -0.74
CCDC78-201ENST00000293889 TYMSOSQ8TAI1 123 aa10.43□□□□□ -0.74
CCDC78-201ENST00000293889 MT1HL1P0DM35 61 aa10.42□□□□□ -0.74
CCDC78-201ENST00000293889 J3QL48 77 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms