RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 IGLV6-57P01721 117 aa2.75□□□□□ -1.97
TSR1-203ENST00000575049 HAMPP81172 84 aa2.75□□□□□ -1.97
TSR1-203ENST00000575049 NREPQ16612 68 aa2.75□□□□□ -1.97
TSR1-203ENST00000575049 DEFB113Q30KQ7 82 aa2.75□□□□□ -1.97
TSR1-203ENST00000575049 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
TSR1-203ENST00000575049 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.75□□□□□ -1.97
TSR1-203ENST00000575049 ATP11AUNQ6ZP68 121 aa2.75□□□□□ -1.97
TSR1-203ENST00000575049 C9orf163Q8N9P6 203 aa2.75□□□□□ -1.97
TSR1-203ENST00000575049 CCL19Q99731 98 aa2.75□□□□□ -1.97
TSR1-203ENST00000575049 NOP10Q9NPE3 64 aaKnown RBP2.75□□□□□ -1.97
TSR1-203ENST00000575049 PRO2289Q9P1D8 64 aa2.75□□□□□ -1.97
TSR1-203ENST00000575049 SNURFQ9Y675 71 aa2.75□□□□□ -1.97
TSR1-203ENST00000575049 WDFY3Q8IZQ1 3526 aa2.74□□□□□ -1.97
TSR1-203ENST00000575049 CEP290O15078 2479 aa2.74□□□□□ -1.97
TSR1-203ENST00000575049 PKDREJQ9NTG1 2253 aa2.74□□□□□ -1.97
TSR1-203ENST00000575049 TRGV2A0A075B6R0 118 aa2.74□□□□□ -1.97
TSR1-203ENST00000575049 A0A087WSZ3 146 aa2.74□□□□□ -1.97
TSR1-203ENST00000575049 IGKV3OR2-268A0A0C4DH90 116 aa2.74□□□□□ -1.97
TSR1-203ENST00000575049 TMEM254Q8TBM7 123 aa2.74□□□□□ -1.97
TSR1-203ENST00000575049 LINC00474Q9P2X8 69 aa2.74□□□□□ -1.97
TSR1-203ENST00000575049 COL6A3P12111 3177 aa2.74□□□□□ -1.97
TSR1-203ENST00000575049 COX7BP24311 80 aa2.73□□□□□ -1.97
TSR1-203ENST00000575049 DEFB136Q30KP8 78 aa2.73□□□□□ -1.97
TSR1-203ENST00000575049 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
TSR1-203ENST00000575049 URB1O60287 2271 aaKnown RBP2.73□□□□□ -1.97
TSR1-203ENST00000575049 PRUNE2Q8WUY3 3088 aa2.73□□□□□ -1.97
TSR1-203ENST00000575049 GVQW2A0A096LPI5 108 aaPredicted RBP2.72□□□□□ -1.97
TSR1-203ENST00000575049 LCE6AA0A183 80 aa2.72□□□□□ -1.97
TSR1-203ENST00000575049 LRCOL1A6NCL2 159 aa2.72□□□□□ -1.97
TSR1-203ENST00000575049 RTL8CO15255 209 aa2.72□□□□□ -1.97
TSR1-203ENST00000575049 ROS1P08922 2347 aa2.72□□□□□ -1.97
TSR1-203ENST00000575049 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
TSR1-203ENST00000575049 Q6ZQY7 126 aa2.72□□□□□ -1.97
TSR1-203ENST00000575049 ABCA4P78363 2273 aa2.72□□□□□ -1.97
TSR1-203ENST00000575049 ZDBF2Q9HCK1 2354 aa2.72□□□□□ -1.97
TSR1-203ENST00000575049 IGKV4-1P06312 121 aa2.71□□□□□ -1.98
TSR1-203ENST00000575049 P0C880 135 aa2.71□□□□□ -1.98
TSR1-203ENST00000575049 ELOF1P60002 83 aaKnown RBP2.71□□□□□ -1.98
TSR1-203ENST00000575049 Q1T7F1 81 aa2.71□□□□□ -1.98
TSR1-203ENST00000575049 WNK2Q9Y3S1 2297 aa2.71□□□□□ -1.98
TSR1-203ENST00000575049 TNRC18O15417 2968 aaPredicted RBP2.7□□□□□ -1.98
TSR1-203ENST00000575049 KRTAP13-2Q52LG2 175 aa2.7□□□□□ -1.98
TSR1-203ENST00000575049 CASC2Q6XLA1 102 aa2.7□□□□□ -1.98
TSR1-203ENST00000575049 PRO0255Q9UI72 69 aa2.7□□□□□ -1.98
TSR1-203ENST00000575049 EYSQ5T1H1 3165 aa2.7□□□□□ -1.98
TSR1-203ENST00000575049 APC2O95996 2303 aa2.69□□□□□ -1.98
TSR1-203ENST00000575049 DSPP15924 2871 aaKnown RBP2.69□□□□□ -1.98
TSR1-203ENST00000575049 DOPEY2Q9Y3R5 2298 aa2.69□□□□□ -1.98
TSR1-203ENST00000575049 SPAG11BQ08648 103 aa2.69□□□□□ -1.98
TSR1-203ENST00000575049 C9orf116Q5BN46 136 aaPredicted RBP2.69□□□□□ -1.98
TSR1-203ENST00000575049 UNQ6190/PRO20217Q6UXQ8 127 aa2.69□□□□□ -1.98
TSR1-203ENST00000575049 ZCCHC13Q8WW36 166 aaKnown RBP2.69□□□□□ -1.98
TSR1-203ENST00000575049 CYP4F30PQ9H0H9 118 aa2.69□□□□□ -1.98
TSR1-203ENST00000575049 MYO15AQ9UKN7 3530 aa2.69□□□□□ -1.98
TSR1-203ENST00000575049 CACNA1BQ00975 2339 aa2.69□□□□□ -1.98
TSR1-203ENST00000575049 VPS13AQ96RL7 3174 aa2.68□□□□□ -1.98
TSR1-203ENST00000575049 ANKHD1Q8IWZ3 2542 aaKnown RBP2.68□□□□□ -1.98
TSR1-203ENST00000575049 OTOGLQ3ZCN5 2332 aa2.68□□□□□ -1.98
TSR1-203ENST00000575049 CFAP47Q6ZTR5 3102 aa2.67□□□□□ -1.98
TSR1-203ENST00000575049 IGLV5-48A0A075B6I7 105 aa2.67□□□□□ -1.98
TSR1-203ENST00000575049 ANGP03950 147 aaKnown RBP2.67□□□□□ -1.98
TSR1-203ENST00000575049 DEFB130BP0DP73 79 aa2.67□□□□□ -1.98
TSR1-203ENST00000575049 DEFB130AP0DP74 79 aa2.67□□□□□ -1.98
TSR1-203ENST00000575049 MIR22HGQ0VDD5 57 aa2.67□□□□□ -1.98
TSR1-203ENST00000575049 CLPSL2Q6UWE3 100 aa2.67□□□□□ -1.98
TSR1-203ENST00000575049 C6orf48Q9UBA6 75 aa2.67□□□□□ -1.98
TSR1-203ENST00000575049 CNOT1A5YKK6 2376 aaKnown RBP2.67□□□□□ -1.98
TSR1-203ENST00000575049 NCOR1O75376 2440 aa2.67□□□□□ -1.98
TSR1-203ENST00000575049 CELSR3Q9NYQ7 3312 aa2.67□□□□□ -1.98
TSR1-203ENST00000575049 A0A0G2JQZ4 141 aa2.66□□□□□ -1.98
TSR1-203ENST00000575049 A0A1W2PNN7 141 aa2.66□□□□□ -1.98
TSR1-203ENST00000575049 TPRXLQ17RH7 258 aa2.66□□□□□ -1.98
TSR1-203ENST00000575049 LELP1Q5T871 98 aa2.66□□□□□ -1.98
TSR1-203ENST00000575049 KRTAP26-1Q6PEX3 210 aa2.66□□□□□ -1.98
TSR1-203ENST00000575049 WFDC10AQ9H1F0 79 aa2.66□□□□□ -1.98
TSR1-203ENST00000575049 SPTBN2O15020 2390 aa2.66□□□□□ -1.98
TSR1-203ENST00000575049 TRIOBPQ9H2D6 2365 aa2.66□□□□□ -1.98
TSR1-203ENST00000575049 ETDCA0A1B0GVM5 59 aa2.65□□□□□ -1.99
TSR1-203ENST00000575049 KRTAP13-3Q3SY46 172 aa2.65□□□□□ -1.99
TSR1-203ENST00000575049 KALRNO60229 2985 aa2.65□□□□□ -1.99
TSR1-203ENST00000575049 CEP250Q9BV73 2442 aa2.64□□□□□ -1.99
TSR1-203ENST00000575049 MED13LQ71F56 2210 aa2.64□□□□□ -1.99
TSR1-203ENST00000575049 NDUFB1O75438 58 aa2.64□□□□□ -1.99
TSR1-203ENST00000575049 SPACA4Q8TDM5 124 aa2.64□□□□□ -1.99
TSR1-203ENST00000575049 SPRR4Q96PI1 79 aa2.64□□□□□ -1.99
TSR1-203ENST00000575049 KCNQ1DNQ9H478 68 aa2.64□□□□□ -1.99
TSR1-203ENST00000575049 ABCA2Q9BZC7 2435 aa2.64□□□□□ -1.99
TSR1-203ENST00000575049 DMXL2Q8TDJ6 3036 aa2.64□□□□□ -1.99
TSR1-203ENST00000575049 BAHCC1Q9P281 2608 aa2.64□□□□□ -1.99
TSR1-203ENST00000575049 TPRP12270 2363 aaKnown RBP2.63□□□□□ -1.99
TSR1-203ENST00000575049 WDFY4Q6ZS81 3184 aa2.63□□□□□ -1.99
TSR1-203ENST00000575049 A0A096LPF7 62 aa2.63□□□□□ -1.99
TSR1-203ENST00000575049 TRAV22A0A0B4J277 110 aa2.63□□□□□ -1.99
TSR1-203ENST00000575049 C1orf137Q5JT78 98 aa2.62□□□□□ -1.99
TSR1-203ENST00000575049 CHD8Q9HCK8 2581 aa2.62□□□□□ -1.99
TSR1-203ENST00000575049 PIEZO2Q9H5I5 2752 aa2.62□□□□□ -1.99
TSR1-203ENST00000575049 LOC400499M0QZD8 3231 aa2.62□□□□□ -1.99
TSR1-203ENST00000575049 PCNX1Q96RV3 2341 aa2.62□□□□□ -1.99
TSR1-203ENST00000575049 SPENQ96T58 3664 aaKnown RBP2.61□□□□□ -1.99
TSR1-203ENST00000575049 MAP1BP46821 2468 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms