RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 SMR3AQ99954 134 aa2.78□□□□□ -1.96
SKP1-213ENST00000524288 UPK3BQ9BT76 320 aa2.78□□□□□ -1.96
SKP1-213ENST00000524288 C16orf95Q9H693 158 aa2.78□□□□□ -1.96
SKP1-213ENST00000524288 CDC42SE2Q9NRR3 84 aa2.78□□□□□ -1.96
SKP1-213ENST00000524288 KLK5Q9Y337 293 aaPredicted RBP2.78□□□□□ -1.96
SKP1-213ENST00000524288 ASPMQ8IZT6 3477 aa2.77□□□□□ -1.97
SKP1-213ENST00000524288 KNCNA6PVL3 124 aa2.77□□□□□ -1.97
SKP1-213ENST00000524288 IBA57-AS1B1ANH7 110 aa2.77□□□□□ -1.97
SKP1-213ENST00000524288 C3orf84H3BNL1 204 aa2.77□□□□□ -1.97
SKP1-213ENST00000524288 BCE1O60756 84 aa2.77□□□□□ -1.97
SKP1-213ENST00000524288 DEFB131AP59861 70 aa2.77□□□□□ -1.97
SKP1-213ENST00000524288 NPC2P61916 151 aa2.77□□□□□ -1.97
SKP1-213ENST00000524288 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
SKP1-213ENST00000524288 C10orf99Q6UWK7 81 aa2.77□□□□□ -1.97
SKP1-213ENST00000524288 COX7B2Q8TF08 81 aa2.77□□□□□ -1.97
SKP1-213ENST00000524288 C4orf3Q8WVX3 66 aa2.77□□□□□ -1.97
SKP1-213ENST00000524288 AKAP6Q13023 2319 aa2.77□□□□□ -1.97
SKP1-213ENST00000524288 IGSF10Q6WRI0 2623 aa2.76□□□□□ -1.97
SKP1-213ENST00000524288 ZNF462Q96JM2 2506 aa2.76□□□□□ -1.97
SKP1-213ENST00000524288 IGHV3-73A0A0B4J1V6 119 aa2.76□□□□□ -1.97
SKP1-213ENST00000524288 TRBV10-3A0A0K0K1G6 114 aa2.76□□□□□ -1.97
SKP1-213ENST00000524288 ZNF73O43830 326 aaPredicted RBP2.76□□□□□ -1.97
SKP1-213ENST00000524288 DNAL4O96015 105 aa2.76□□□□□ -1.97
SKP1-213ENST00000524288 SS18Q15532 418 aa2.76□□□□□ -1.97
SKP1-213ENST00000524288 LYPD5Q6UWN5 251 aa2.76□□□□□ -1.97
SKP1-213ENST00000524288 C1orf158Q8N1D5 194 aa2.76□□□□□ -1.97
SKP1-213ENST00000524288 SERP2Q8N6R1 65 aa2.76□□□□□ -1.97
SKP1-213ENST00000524288 LAMA5O15230 3695 aa2.76□□□□□ -1.97
SKP1-213ENST00000524288 SORL1Q92673 2214 aa2.76□□□□□ -1.97
SKP1-213ENST00000524288 TRBV6-4A0A1B0GX49 114 aa2.75□□□□□ -1.97
SKP1-213ENST00000524288 CCL18P55774 89 aa2.75□□□□□ -1.97
SKP1-213ENST00000524288 DEFB114Q30KQ6 69 aa2.75□□□□□ -1.97
SKP1-213ENST00000524288 S100A7L2Q5SY68 101 aa2.75□□□□□ -1.97
SKP1-213ENST00000524288 SMIM11BQ8TCY0 68 aa2.75□□□□□ -1.97
SKP1-213ENST00000524288 ITPR1Q14643 2758 aa2.75□□□□□ -1.97
SKP1-213ENST00000524288 NBASA2RRP1 2371 aa2.74□□□□□ -1.97
SKP1-213ENST00000524288 EPG5Q9HCE0 2579 aa2.74□□□□□ -1.97
SKP1-213ENST00000524288 SMIM9A6NGZ8 99 aa2.74□□□□□ -1.97
SKP1-213ENST00000524288 JMJD7-PLA2G4BH0Y9G9 81 aa2.74□□□□□ -1.97
SKP1-213ENST00000524288 NDUFC2O95298 119 aa2.74□□□□□ -1.97
SKP1-213ENST00000524288 CCKP06307 115 aa2.74□□□□□ -1.97
SKP1-213ENST00000524288 OR13C6PQ8NH95 151 aa2.74□□□□□ -1.97
SKP1-213ENST00000524288 LINC00846Q9NV44 126 aa2.74□□□□□ -1.97
SKP1-213ENST00000524288 HIVEP2P31629 2446 aa2.74□□□□□ -1.97
SKP1-213ENST00000524288 DOPEY1Q5JWR5 2465 aa2.74□□□□□ -1.97
SKP1-213ENST00000524288 TRGV1A0A0A0MS02 117 aa2.73□□□□□ -1.97
SKP1-213ENST00000524288 TRAV13-1A0A0B4J241 112 aa2.73□□□□□ -1.97
SKP1-213ENST00000524288 hADV29S1A0JD25 119 aa2.73□□□□□ -1.97
SKP1-213ENST00000524288 Q6ZTI0 123 aa2.73□□□□□ -1.97
SKP1-213ENST00000524288 Q8IZM0 81 aa2.73□□□□□ -1.97
SKP1-213ENST00000524288 DYNLRB2Q8TF09 96 aa2.73□□□□□ -1.97
SKP1-213ENST00000524288 C20orf166-AS1Q96NR2 134 aa2.73□□□□□ -1.97
SKP1-213ENST00000524288 C14orf132Q9NPU4 83 aa2.73□□□□□ -1.97
SKP1-213ENST00000524288 ORMDL1Q9P0S3 153 aa2.73□□□□□ -1.97
SKP1-213ENST00000524288 CSPG4Q6UVK1 2322 aa2.73□□□□□ -1.97
SKP1-213ENST00000524288 CSMD1Q96PZ7 3565 aa2.72□□□□□ -1.97
SKP1-213ENST00000524288 UBR5O95071 2799 aaPredicted RBP2.72□□□□□ -1.97
SKP1-213ENST00000524288 LOC110117498A0A087WWA1 95 aa2.72□□□□□ -1.97
SKP1-213ENST00000524288 TRBV6-8A0A0A6YYG3 113 aa2.72□□□□□ -1.97
SKP1-213ENST00000524288 UBE2L6O14933 153 aa2.72□□□□□ -1.97
SKP1-213ENST00000524288 ANKRD17O75179 2603 aaKnown RBP2.72□□□□□ -1.97
SKP1-213ENST00000524288 PRM2P04554 102 aa2.72□□□□□ -1.97
SKP1-213ENST00000524288 COX17Q14061 63 aa2.72□□□□□ -1.97
SKP1-213ENST00000524288 C1orf195Q5TG92 126 aa2.72□□□□□ -1.97
SKP1-213ENST00000524288 C3orf56Q8N813 242 aa2.72□□□□□ -1.97
SKP1-213ENST00000524288 DPH3Q96FX2 82 aa2.72□□□□□ -1.97
SKP1-213ENST00000524288 CYSTM1Q9H1C7 97 aa2.72□□□□□ -1.97
SKP1-213ENST00000524288 CELSR1Q9NYQ6 3014 aa2.72□□□□□ -1.97
SKP1-213ENST00000524288 LINC00959A0A1B0GUT2 108 aa2.71□□□□□ -1.98
SKP1-213ENST00000524288 TMEM256-PLSCR3K7ERE1 68 aa2.71□□□□□ -1.98
SKP1-213ENST00000524288 HTN1P15515 57 aa2.71□□□□□ -1.98
SKP1-213ENST00000524288 LINC00158P58513 81 aa2.71□□□□□ -1.98
SKP1-213ENST00000524288 DEFB136Q30KP8 78 aa2.71□□□□□ -1.98
SKP1-213ENST00000524288 MYO18BQ8IUG5 2567 aa2.7□□□□□ -1.98
SKP1-213ENST00000524288 TRAV7A0A075B6U4 112 aa2.7□□□□□ -1.98
SKP1-213ENST00000524288 IGKV3D-7A0A0C4DH55 119 aa2.7□□□□□ -1.98
SKP1-213ENST00000524288 LOC107984640A0A0U1RRK4 108 aa2.7□□□□□ -1.98
SKP1-213ENST00000524288 NCR3O14931 201 aa2.7□□□□□ -1.98
SKP1-213ENST00000524288 KLKP1Q107X0 134 aa2.7□□□□□ -1.98
SKP1-213ENST00000524288 Q5XG85 94 aa2.7□□□□□ -1.98
SKP1-213ENST00000524288 Q6ZQT0 140 aa2.7□□□□□ -1.98
SKP1-213ENST00000524288 Q8N814 137 aa2.7□□□□□ -1.98
SKP1-213ENST00000524288 ZFYVE26Q68DK2 2539 aa2.7□□□□□ -1.98
SKP1-213ENST00000524288 ASH1LQ9NR48 2969 aaKnown RBP2.7□□□□□ -1.98
SKP1-213ENST00000524288 AKAP9Q99996 3911 aa2.69□□□□□ -1.98
SKP1-213ENST00000524288 A0A087WVE0 104 aa2.69□□□□□ -1.98
SKP1-213ENST00000524288 PDE6GP18545 87 aa2.69□□□□□ -1.98
SKP1-213ENST00000524288 ATP5EP56381 51 aaPredicted RBP2.69□□□□□ -1.98
SKP1-213ENST00000524288 LINC00575Q6W349 94 aa2.69□□□□□ -1.98
SKP1-213ENST00000524288 UBL5Q9BZL1 73 aa2.69□□□□□ -1.98
SKP1-213ENST00000524288 NOP10Q9NPE3 64 aaKnown RBP2.69□□□□□ -1.98
SKP1-213ENST00000524288 SERP1Q9Y6X1 66 aa2.69□□□□□ -1.98
SKP1-213ENST00000524288 RELNP78509 3460 aa2.69□□□□□ -1.98
SKP1-213ENST00000524288 CHD6Q8TD26 2715 aa2.69□□□□□ -1.98
SKP1-213ENST00000524288 CFAP46Q8IYW2 2715 aa2.68□□□□□ -1.98
SKP1-213ENST00000524288 TRGV2A0A075B6R0 118 aa2.68□□□□□ -1.98
SKP1-213ENST00000524288 GVQW2A0A096LPI5 108 aaPredicted RBP2.68□□□□□ -1.98
SKP1-213ENST00000524288 TRGV4A0A0C4DH28 118 aa2.68□□□□□ -1.98
SKP1-213ENST00000524288 TRBV7-6A0A0J9YX20 115 aa2.68□□□□□ -1.98
SKP1-213ENST00000524288 FAM236DA0A1B0GTK5 79 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms