RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 CNTRLQ7Z7A1 2325 aa2.84□□□□□ -1.95
RNU6ATAC39P-201ENST00000516309 K7EQZ3 153 aa2.84□□□□□ -1.95
RNU6ATAC39P-201ENST00000516309 CRIP1P50238 77 aa2.84□□□□□ -1.95
RNU6ATAC39P-201ENST00000516309 COX6B2Q6YFQ2 88 aa2.84□□□□□ -1.95
RNU6ATAC39P-201ENST00000516309 MRPL34Q9BQ48 92 aaKnown RBP2.84□□□□□ -1.95
RNU6ATAC39P-201ENST00000516309 LMO7Q8WWI1 1683 aa2.83□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 GOLGA4Q13439 2230 aaKnown RBP2.83□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 CCL22O00626 93 aa2.82□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 SPINK4O60575 86 aa2.82□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 CNFNQ9BYD5 112 aa2.82□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 CDKN2A-AS1Q9UH64 79 aa2.81□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 CACNA1EQ15878 2313 aa2.8□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 FAM208BQ5VWN6 2430 aa2.8□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 NDUFA3O95167 84 aa2.79□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 Q8IZM0 81 aa2.79□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 TMEM167BQ9NRX6 74 aa2.79□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 DUOX1Q9NRD9 1551 aa2.78□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 BPTFQ12830 3046 aa2.78□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 LINC00158P58513 81 aa2.78□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 CNOT1A5YKK6 2376 aaKnown RBP2.78□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 JMJD1CQ15652 2540 aa2.76□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 SNRPGP62308 76 aaKnown RBP2.76□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 KRTAP9-6A8MVA2 160 aa2.75□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 KRTAP13-1Q8IUC0 172 aa2.75□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 GCC2Q8IWJ2 1684 aa2.75□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.74□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 LYNX1G3V0Z9 82 aa2.73□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 COX6A2Q02221 97 aa2.73□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 PRO3102Q9H379 93 aa2.73□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 PRO0255Q9UI72 69 aa2.73□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 SPINK9Q5DT21 86 aa2.72□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 J3QKU1 62 aa2.7□□□□□ -1.98
RNU6ATAC39P-201ENST00000516309 LINC00308Q8TCZ7 52 aa2.7□□□□□ -1.98
RNU6ATAC39P-201ENST00000516309 KRTAP12-4P60329 112 aa2.68□□□□□ -1.98
RNU6ATAC39P-201ENST00000516309 C10orf95Q9H7T3 257 aa2.67□□□□□ -1.98
RNU6ATAC39P-201ENST00000516309 DOPEY2Q9Y3R5 2298 aa2.67□□□□□ -1.98
RNU6ATAC39P-201ENST00000516309 OTOGLQ3ZCN5 2332 aa2.67□□□□□ -1.98
RNU6ATAC39P-201ENST00000516309 FBN1P35555 2871 aaKnown RBP2.66□□□□□ -1.98
RNU6ATAC39P-201ENST00000516309 LOC730098B7Z3J9 87 aa2.65□□□□□ -1.99
RNU6ATAC39P-201ENST00000516309 H0YAA0 97 aa2.64□□□□□ -1.99
RNU6ATAC39P-201ENST00000516309 MINOS1Q5TGZ0 78 aa2.64□□□□□ -1.99
RNU6ATAC39P-201ENST00000516309 Q5VSD8 79 aa2.62□□□□□ -1.99
RNU6ATAC39P-201ENST00000516309 SORL1Q92673 2214 aa2.61□□□□□ -1.99
RNU6ATAC39P-201ENST00000516309 PIEZO2Q9H5I5 2752 aa2.61□□□□□ -1.99
RNU6ATAC39P-201ENST00000516309 SMIM2Q9BVW6 85 aa2.6□□□□□ -1.99
RNU6ATAC39P-201ENST00000516309 C6orf48Q9UBA6 75 aa2.6□□□□□ -1.99
RNU6ATAC39P-201ENST00000516309 COL6A6A6NMZ7 2263 aa2.59□□□□□ -1.99
RNU6ATAC39P-201ENST00000516309 KRTAP5-8O75690 187 aa2.58□□□□□ -2
RNU6ATAC39P-201ENST00000516309 SPRR1AP35321 89 aa2.57□□□□□ -2
RNU6ATAC39P-201ENST00000516309 Q6ZSA8 131 aa2.57□□□□□ -2
RNU6ATAC39P-201ENST00000516309 PLCE1Q9P212 2302 aa2.56□□□□□ -2
RNU6ATAC39P-201ENST00000516309 TFF3Q07654 80 aa2.56□□□□□ -2
RNU6ATAC39P-201ENST00000516309 CLTCL1P53675 1640 aa2.56□□□□□ -2
RNU6ATAC39P-201ENST00000516309 PRB3Q04118 309 aaPredicted RBP2.55□□□□□ -2
RNU6ATAC39P-201ENST00000516309 LELP1Q5T871 98 aa2.55□□□□□ -2
RNU6ATAC39P-201ENST00000516309 DEFB105AQ8NG35 78 aa2.55□□□□□ -2
RNU6ATAC39P-201ENST00000516309 APLNQ9ULZ1 77 aa2.55□□□□□ -2
RNU6ATAC39P-201ENST00000516309 PTPRZ1P23471 2315 aaPredicted RBP2.54□□□□□ -2
RNU6ATAC39P-201ENST00000516309 H1FX-AS1Q4G0G2 97 aa2.54□□□□□ -2
RNU6ATAC39P-201ENST00000516309 NDUFA1O15239 70 aa2.53□□□□□ -2
RNU6ATAC39P-201ENST00000516309 IAPPP10997 89 aa2.53□□□□□ -2
RNU6ATAC39P-201ENST00000516309 PTPRQQ9UMZ3 2332 aa2.52□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 A0A0D9SG42 100 aa2.51□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 WFDC13Q8IUB5 93 aa2.51□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 RP1L1Q8IWN7 2480 aaPredicted RBP2.5□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 NOTCH2Q04721 2471 aa2.49□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 TRIOBPQ9H2D6 2365 aa2.49□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 ROS1P08922 2347 aa2.49□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 SPRR1BP22528 89 aa2.48□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 KRTAP12-3P60328 96 aa2.47□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 USF3Q68DE3 2245 aa2.47□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 ALMS1Q8TCU4 4167 aa2.46□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 RPS27P42677 84 aaKnown RBP2.45□□□□□ -2.02
RNU6ATAC39P-201ENST00000516309 KRTAP21-3Q3LHN1 58 aa2.45□□□□□ -2.02
RNU6ATAC39P-201ENST00000516309 RPS27LQ71UM5 84 aaKnown RBP2.45□□□□□ -2.02
RNU6ATAC39P-201ENST00000516309 DEFB130BP0DP73 79 aa2.44□□□□□ -2.02
RNU6ATAC39P-201ENST00000516309 DEFB130AP0DP74 79 aa2.44□□□□□ -2.02
RNU6ATAC39P-201ENST00000516309 C2CD3Q4AC94 2353 aa2.41□□□□□ -2.02
RNU6ATAC39P-201ENST00000516309 ASH1LQ9NR48 2969 aaKnown RBP2.4□□□□□ -2.02
RNU6ATAC39P-201ENST00000516309 ZNF462Q96JM2 2506 aa2.38□□□□□ -2.03
RNU6ATAC39P-201ENST00000516309 HIVEP2P31629 2446 aa2.36□□□□□ -2.03
RNU6ATAC39P-201ENST00000516309 KLK9Q2XQG4 91 aa2.36□□□□□ -2.03
RNU6ATAC39P-201ENST00000516309 WFDC10BQ8IUB3 73 aa2.36□□□□□ -2.03
RNU6ATAC39P-201ENST00000516309 WNK2Q9Y3S1 2297 aa2.35□□□□□ -2.03
RNU6ATAC39P-201ENST00000516309 WT1-ASQ06250 92 aa2.35□□□□□ -2.03
RNU6ATAC39P-201ENST00000516309 KRTAP10-4P60372 401 aaPredicted RBP2.34□□□□□ -2.03
RNU6ATAC39P-201ENST00000516309 PKDREJQ9NTG1 2253 aa2.33□□□□□ -2.04
RNU6ATAC39P-201ENST00000516309 H3BUA1 57 aa2.33□□□□□ -2.04
RNU6ATAC39P-201ENST00000516309 SPTBN2O15020 2390 aa2.31□□□□□ -2.04
RNU6ATAC39P-201ENST00000516309 CACNA1HO95180 2353 aa2.29□□□□□ -2.04
RNU6ATAC39P-201ENST00000516309 KAAG1Q9UBP8 84 aa2.29□□□□□ -2.04
RNU6ATAC39P-201ENST00000516309 IGLV5-48A0A075B6I7 105 aa2.28□□□□□ -2.04
RNU6ATAC39P-201ENST00000516309 LCE3AQ5TA76 89 aa2.26□□□□□ -2.05
RNU6ATAC39P-201ENST00000516309 DEFB131AP59861 70 aa2.25□□□□□ -2.05
RNU6ATAC39P-201ENST00000516309 SPTBN1Q01082 2364 aaKnown RBP2.24□□□□□ -2.05
RNU6ATAC39P-201ENST00000516309 TPRP12270 2363 aaKnown RBP2.23□□□□□ -2.05
RNU6ATAC39P-201ENST00000516309 IGF2RP11717 2491 aa2.23□□□□□ -2.05
RNU6ATAC39P-201ENST00000516309 PDE4DIPQ5VU43 2346 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 275.5 ms