RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 CNTRLQ7Z7A1 2325 aa2.84□□□□□ -1.95
RNU6ATAC39P-201ENST00000516309 K7EQZ3 153 aa2.84□□□□□ -1.95
RNU6ATAC39P-201ENST00000516309 CRIP1P50238 77 aa2.84□□□□□ -1.95
RNU6ATAC39P-201ENST00000516309 COX6B2Q6YFQ2 88 aa2.84□□□□□ -1.95
RNU6ATAC39P-201ENST00000516309 MRPL34Q9BQ48 92 aaKnown RBP2.84□□□□□ -1.95
RNU6ATAC39P-201ENST00000516309 LMO7Q8WWI1 1683 aa2.83□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 GOLGA4Q13439 2230 aaKnown RBP2.83□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 CCL22O00626 93 aa2.82□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 SPINK4O60575 86 aa2.82□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 CNFNQ9BYD5 112 aa2.82□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 CDKN2A-AS1Q9UH64 79 aa2.81□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 CACNA1EQ15878 2313 aa2.8□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 FAM208BQ5VWN6 2430 aa2.8□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 NDUFA3O95167 84 aa2.79□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 Q8IZM0 81 aa2.79□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 TMEM167BQ9NRX6 74 aa2.79□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 DUOX1Q9NRD9 1551 aa2.78□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 BPTFQ12830 3046 aa2.78□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 LINC00158P58513 81 aa2.78□□□□□ -1.96
RNU6ATAC39P-201ENST00000516309 CNOT1A5YKK6 2376 aaKnown RBP2.78□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 JMJD1CQ15652 2540 aa2.76□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 SNRPGP62308 76 aaKnown RBP2.76□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 KRTAP9-6A8MVA2 160 aa2.75□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 KRTAP13-1Q8IUC0 172 aa2.75□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 GCC2Q8IWJ2 1684 aa2.75□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.74□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 LYNX1G3V0Z9 82 aa2.73□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 COX6A2Q02221 97 aa2.73□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 PRO3102Q9H379 93 aa2.73□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 PRO0255Q9UI72 69 aa2.73□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 SPINK9Q5DT21 86 aa2.72□□□□□ -1.97
RNU6ATAC39P-201ENST00000516309 J3QKU1 62 aa2.7□□□□□ -1.98
RNU6ATAC39P-201ENST00000516309 LINC00308Q8TCZ7 52 aa2.7□□□□□ -1.98
RNU6ATAC39P-201ENST00000516309 KRTAP12-4P60329 112 aa2.68□□□□□ -1.98
RNU6ATAC39P-201ENST00000516309 C10orf95Q9H7T3 257 aa2.67□□□□□ -1.98
RNU6ATAC39P-201ENST00000516309 DOPEY2Q9Y3R5 2298 aa2.67□□□□□ -1.98
RNU6ATAC39P-201ENST00000516309 OTOGLQ3ZCN5 2332 aa2.67□□□□□ -1.98
RNU6ATAC39P-201ENST00000516309 FBN1P35555 2871 aaKnown RBP2.66□□□□□ -1.98
RNU6ATAC39P-201ENST00000516309 LOC730098B7Z3J9 87 aa2.65□□□□□ -1.99
RNU6ATAC39P-201ENST00000516309 H0YAA0 97 aa2.64□□□□□ -1.99
RNU6ATAC39P-201ENST00000516309 MINOS1Q5TGZ0 78 aa2.64□□□□□ -1.99
RNU6ATAC39P-201ENST00000516309 Q5VSD8 79 aa2.62□□□□□ -1.99
RNU6ATAC39P-201ENST00000516309 SORL1Q92673 2214 aa2.61□□□□□ -1.99
RNU6ATAC39P-201ENST00000516309 PIEZO2Q9H5I5 2752 aa2.61□□□□□ -1.99
RNU6ATAC39P-201ENST00000516309 SMIM2Q9BVW6 85 aa2.6□□□□□ -1.99
RNU6ATAC39P-201ENST00000516309 C6orf48Q9UBA6 75 aa2.6□□□□□ -1.99
RNU6ATAC39P-201ENST00000516309 COL6A6A6NMZ7 2263 aa2.59□□□□□ -1.99
RNU6ATAC39P-201ENST00000516309 KRTAP5-8O75690 187 aa2.58□□□□□ -2
RNU6ATAC39P-201ENST00000516309 SPRR1AP35321 89 aa2.57□□□□□ -2
RNU6ATAC39P-201ENST00000516309 Q6ZSA8 131 aa2.57□□□□□ -2
RNU6ATAC39P-201ENST00000516309 PLCE1Q9P212 2302 aa2.56□□□□□ -2
RNU6ATAC39P-201ENST00000516309 TFF3Q07654 80 aa2.56□□□□□ -2
RNU6ATAC39P-201ENST00000516309 CLTCL1P53675 1640 aa2.56□□□□□ -2
RNU6ATAC39P-201ENST00000516309 PRB3Q04118 309 aaPredicted RBP2.55□□□□□ -2
RNU6ATAC39P-201ENST00000516309 LELP1Q5T871 98 aa2.55□□□□□ -2
RNU6ATAC39P-201ENST00000516309 DEFB105AQ8NG35 78 aa2.55□□□□□ -2
RNU6ATAC39P-201ENST00000516309 APLNQ9ULZ1 77 aa2.55□□□□□ -2
RNU6ATAC39P-201ENST00000516309 PTPRZ1P23471 2315 aaPredicted RBP2.54□□□□□ -2
RNU6ATAC39P-201ENST00000516309 H1FX-AS1Q4G0G2 97 aa2.54□□□□□ -2
RNU6ATAC39P-201ENST00000516309 NDUFA1O15239 70 aa2.53□□□□□ -2
RNU6ATAC39P-201ENST00000516309 IAPPP10997 89 aa2.53□□□□□ -2
RNU6ATAC39P-201ENST00000516309 PTPRQQ9UMZ3 2332 aa2.52□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 A0A0D9SG42 100 aa2.51□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 WFDC13Q8IUB5 93 aa2.51□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 RP1L1Q8IWN7 2480 aaPredicted RBP2.5□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 NOTCH2Q04721 2471 aa2.49□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 TRIOBPQ9H2D6 2365 aa2.49□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 ROS1P08922 2347 aa2.49□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 SPRR1BP22528 89 aa2.48□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 KRTAP12-3P60328 96 aa2.47□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 USF3Q68DE3 2245 aa2.47□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 ALMS1Q8TCU4 4167 aa2.46□□□□□ -2.01
RNU6ATAC39P-201ENST00000516309 RPS27P42677 84 aaKnown RBP2.45□□□□□ -2.02
RNU6ATAC39P-201ENST00000516309 KRTAP21-3Q3LHN1 58 aa2.45□□□□□ -2.02
RNU6ATAC39P-201ENST00000516309 RPS27LQ71UM5 84 aaKnown RBP2.45□□□□□ -2.02
RNU6ATAC39P-201ENST00000516309 DEFB130BP0DP73 79 aa2.44□□□□□ -2.02
RNU6ATAC39P-201ENST00000516309 DEFB130AP0DP74 79 aa2.44□□□□□ -2.02
RNU6ATAC39P-201ENST00000516309 C2CD3Q4AC94 2353 aa2.41□□□□□ -2.02
RNU6ATAC39P-201ENST00000516309 ASH1LQ9NR48 2969 aaKnown RBP2.4□□□□□ -2.02
RNU6ATAC39P-201ENST00000516309 ZNF462Q96JM2 2506 aa2.38□□□□□ -2.03
RNU6ATAC39P-201ENST00000516309 HIVEP2P31629 2446 aa2.36□□□□□ -2.03
RNU6ATAC39P-201ENST00000516309 KLK9Q2XQG4 91 aa2.36□□□□□ -2.03
RNU6ATAC39P-201ENST00000516309 WFDC10BQ8IUB3 73 aa2.36□□□□□ -2.03
RNU6ATAC39P-201ENST00000516309 WNK2Q9Y3S1 2297 aa2.35□□□□□ -2.03
RNU6ATAC39P-201ENST00000516309 WT1-ASQ06250 92 aa2.35□□□□□ -2.03
RNU6ATAC39P-201ENST00000516309 KRTAP10-4P60372 401 aaPredicted RBP2.34□□□□□ -2.03
RNU6ATAC39P-201ENST00000516309 PKDREJQ9NTG1 2253 aa2.33□□□□□ -2.04
RNU6ATAC39P-201ENST00000516309 H3BUA1 57 aa2.33□□□□□ -2.04
RNU6ATAC39P-201ENST00000516309 SPTBN2O15020 2390 aa2.31□□□□□ -2.04
RNU6ATAC39P-201ENST00000516309 CACNA1HO95180 2353 aa2.29□□□□□ -2.04
RNU6ATAC39P-201ENST00000516309 KAAG1Q9UBP8 84 aa2.29□□□□□ -2.04
RNU6ATAC39P-201ENST00000516309 IGLV5-48A0A075B6I7 105 aa2.28□□□□□ -2.04
RNU6ATAC39P-201ENST00000516309 LCE3AQ5TA76 89 aa2.26□□□□□ -2.05
RNU6ATAC39P-201ENST00000516309 DEFB131AP59861 70 aa2.25□□□□□ -2.05
RNU6ATAC39P-201ENST00000516309 SPTBN1Q01082 2364 aaKnown RBP2.24□□□□□ -2.05
RNU6ATAC39P-201ENST00000516309 TPRP12270 2363 aaKnown RBP2.23□□□□□ -2.05
RNU6ATAC39P-201ENST00000516309 IGF2RP11717 2491 aa2.23□□□□□ -2.05
RNU6ATAC39P-201ENST00000516309 PDE4DIPQ5VU43 2346 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms