RNA–Protein interactions for RNA: ENST00000515675.1

AFP-207, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 317 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-207ENST00000515675 LMTK2Q8IWU2 1503 aa0.52□□□□□ -2.33
AFP-207ENST00000515675 F8P00451 2351 aa0.52□□□□□ -2.33
AFP-207ENST00000515675 PTPRZ1P23471 2315 aaPredicted RBP0.51□□□□□ -2.33
AFP-207ENST00000515675 CACNA1EQ15878 2313 aa0.5□□□□□ -2.33
AFP-207ENST00000515675 ANK2Q01484 3957 aa0.5□□□□□ -2.33
AFP-207ENST00000515675 NHSQ6T4R5 1651 aa0.5□□□□□ -2.33
AFP-207ENST00000515675 C3orf79P0CE67 100 aa0.5□□□□□ -2.33
AFP-207ENST00000515675 RPL38P63173 70 aaKnown RBP0.5□□□□□ -2.33
AFP-207ENST00000515675 H1FX-AS1Q4G0G2 97 aa0.5□□□□□ -2.33
AFP-207ENST00000515675 SPTBN2O15020 2390 aa0.5□□□□□ -2.33
AFP-207ENST00000515675 CCDC180Q9P1Z9 1646 aa0.49□□□□□ -2.33
AFP-207ENST00000515675 RALGAPBQ86X10 1494 aa0.49□□□□□ -2.33
AFP-207ENST00000515675 NDUFA4O00483 81 aa0.49□□□□□ -2.33
AFP-207ENST00000515675 SPINK1P00995 79 aa0.49□□□□□ -2.33
AFP-207ENST00000515675 ATXN8Q156A1 80 aa0.49□□□□□ -2.33
AFP-207ENST00000515675 CELSR2Q9HCU4 2923 aa0.49□□□□□ -2.33
AFP-207ENST00000515675 CSMD3Q7Z407 3707 aa0.48□□□□□ -2.33
AFP-207ENST00000515675 ABCA12Q86UK0 2595 aa0.48□□□□□ -2.33
AFP-207ENST00000515675 S100ZQ8WXG8 99 aa0.48□□□□□ -2.33
AFP-207ENST00000515675 ENHOQ6UWT2 76 aa0.47□□□□□ -2.33
AFP-207ENST00000515675 COX6B2Q6YFQ2 88 aa0.47□□□□□ -2.33
AFP-207ENST00000515675 KCNQ1DNQ9H478 68 aa0.47□□□□□ -2.33
AFP-207ENST00000515675 GLI2P10070 1586 aa0.47□□□□□ -2.33
AFP-207ENST00000515675 PIEZO2Q9H5I5 2752 aa0.47□□□□□ -2.33
AFP-207ENST00000515675 TPRP12270 2363 aaKnown RBP0.47□□□□□ -2.33
AFP-207ENST00000515675 RNF17Q9BXT8 1623 aaKnown RBP0.46□□□□□ -2.34
AFP-207ENST00000515675 CCL22O00626 93 aa0.46□□□□□ -2.34
AFP-207ENST00000515675 SFTA3P0C7M3 94 aa0.46□□□□□ -2.34
AFP-207ENST00000515675 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.46□□□□□ -2.34
AFP-207ENST00000515675 ABCA6Q8N139 1617 aa0.46□□□□□ -2.34
AFP-207ENST00000515675 PKDREJQ9NTG1 2253 aa0.45□□□□□ -2.34
AFP-207ENST00000515675 ZNF292O60281 2723 aa0.45□□□□□ -2.34
AFP-207ENST00000515675 TIAM1Q13009 1591 aa0.45□□□□□ -2.34
AFP-207ENST00000515675 THOC2Q8NI27 1593 aaKnown RBP0.45□□□□□ -2.34
AFP-207ENST00000515675 NDUFA3O95167 84 aa0.45□□□□□ -2.34
AFP-207ENST00000515675 GNG13Q9P2W3 67 aa0.45□□□□□ -2.34
AFP-207ENST00000515675 NCOR1O75376 2440 aa0.45□□□□□ -2.34
AFP-207ENST00000515675 SYNE1Q8NF91 8797 aaKnown RBP0.45□□□□□ -2.34
AFP-207ENST00000515675 ABCC6O95255 1503 aa0.44□□□□□ -2.34
AFP-207ENST00000515675 BDP1A6H8Y1 2624 aa0.44□□□□□ -2.34
AFP-207ENST00000515675 LINC01549A6NIU2 74 aa0.44□□□□□ -2.34
AFP-207ENST00000515675 APCP25054 2843 aa0.43□□□□□ -2.34
AFP-207ENST00000515675 PREX2Q70Z35 1606 aa0.43□□□□□ -2.34
AFP-207ENST00000515675 DEFB131BA0A096LNP1 70 aa0.43□□□□□ -2.34
AFP-207ENST00000515675 WFDC13Q8IUB5 93 aa0.43□□□□□ -2.34
AFP-207ENST00000515675 CDKN2A-AS1Q9UH64 79 aa0.43□□□□□ -2.34
AFP-207ENST00000515675 U3KQA8 63 aa0.43□□□□□ -2.34
AFP-207ENST00000515675 SPTBN1Q01082 2364 aaKnown RBP0.43□□□□□ -2.34
AFP-207ENST00000515675 CHD9Q3L8U1 2897 aa0.42□□□□□ -2.34
AFP-207ENST00000515675 H0YAA0 97 aa0.42□□□□□ -2.34
AFP-207ENST00000515675 SPINK4O60575 86 aa0.42□□□□□ -2.34
AFP-207ENST00000515675 CRIP1P50238 77 aa0.42□□□□□ -2.34
AFP-207ENST00000515675 DEFB114Q30KQ6 69 aa0.42□□□□□ -2.34
AFP-207ENST00000515675 IGF2RP11717 2491 aa0.42□□□□□ -2.34
AFP-207ENST00000515675 CNOT1A5YKK6 2376 aaKnown RBP0.41□□□□□ -2.34
AFP-207ENST00000515675 PLXNC1O60486 1568 aa0.41□□□□□ -2.34
AFP-207ENST00000515675 MAST1Q9Y2H9 1570 aa0.41□□□□□ -2.34
AFP-207ENST00000515675 C3P01024 1663 aa0.41□□□□□ -2.34
AFP-207ENST00000515675 KIF1AQ12756 1690 aa0.41□□□□□ -2.34
AFP-207ENST00000515675 ALS2Q96Q42 1657 aa0.41□□□□□ -2.34
AFP-207ENST00000515675 UBL5Q9BZL1 73 aa0.41□□□□□ -2.34
AFP-207ENST00000515675 REV3LO60673 3130 aa0.4□□□□□ -2.34
AFP-207ENST00000515675 AKAP6Q13023 2319 aa0.4□□□□□ -2.35
AFP-207ENST00000515675 LOC730098B7Z3J9 87 aa0.4□□□□□ -2.35
AFP-207ENST00000515675 PIEZO1Q92508 2521 aa0.4□□□□□ -2.35
AFP-207ENST00000515675 GVINP1Q7Z2Y8 2422 aa0.39□□□□□ -2.35
AFP-207ENST00000515675 ETDCA0A1B0GVM5 59 aa0.39□□□□□ -2.35
AFP-207ENST00000515675 LYNX1G3V0Z9 82 aa0.39□□□□□ -2.35
AFP-207ENST00000515675 KRTAP21-1Q3LI58 79 aa0.39□□□□□ -2.35
AFP-207ENST00000515675 PRXQ9BXM0 1461 aa0.39□□□□□ -2.35
AFP-207ENST00000515675 ABCA10Q8WWZ4 1543 aa0.38□□□□□ -2.35
AFP-207ENST00000515675 CSPG4Q6UVK1 2322 aa0.38□□□□□ -2.35
AFP-207ENST00000515675 USP24Q9UPU5 2620 aa0.38□□□□□ -2.35
AFP-207ENST00000515675 MRPL33O75394 65 aaKnown RBP0.38□□□□□ -2.35
AFP-207ENST00000515675 SMIM5Q71RC9 77 aa0.38□□□□□ -2.35
AFP-207ENST00000515675 PRO3102Q9H379 93 aa0.38□□□□□ -2.35
AFP-207ENST00000515675 LY75O60449 1722 aa0.38□□□□□ -2.35
AFP-207ENST00000515675 DEPDC5O75140 1603 aa0.38□□□□□ -2.35
AFP-207ENST00000515675 EEA1Q15075 1411 aa0.38□□□□□ -2.35
AFP-207ENST00000515675 TENM4Q6N022 2769 aa0.37□□□□□ -2.35
AFP-207ENST00000515675 PRM1P04553 51 aa0.37□□□□□ -2.35
AFP-207ENST00000515675 LINC00158P58513 81 aa0.37□□□□□ -2.35
AFP-207ENST00000515675 FAT2Q9NYQ8 4349 aa0.37□□□□□ -2.35
AFP-207ENST00000515675 MUC5BQ9HC84 5762 aaPredicted RBP0.36□□□□□ -2.35
AFP-207ENST00000515675 WNK2Q9Y3S1 2297 aa0.36□□□□□ -2.35
AFP-207ENST00000515675 BSNQ9UPA5 3926 aa0.36□□□□□ -2.35
AFP-207ENST00000515675 VWFP04275 2813 aa0.36□□□□□ -2.35
AFP-207ENST00000515675 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
AFP-207ENST00000515675 ANKRD36CQ5JPF3 1778 aa0.36□□□□□ -2.35
AFP-207ENST00000515675 MROH2AA6NES4 1674 aa0.36□□□□□ -2.35
AFP-207ENST00000515675 CREBBPQ92793 2442 aa0.36□□□□□ -2.35
AFP-207ENST00000515675 CPS1P31327 1500 aa0.35□□□□□ -2.35
AFP-207ENST00000515675 KNL1Q8NG31 2342 aa0.35□□□□□ -2.35
AFP-207ENST00000515675 IGIPA6NJ69 53 aa0.35□□□□□ -2.35
AFP-207ENST00000515675 K7EMI3 77 aa0.35□□□□□ -2.35
AFP-207ENST00000515675 TNXBP22105 4242 aa0.34□□□□□ -2.35
AFP-207ENST00000515675 ITSN2Q9NZM3 1697 aa0.34□□□□□ -2.35
AFP-207ENST00000515675 ALMS1Q8TCU4 4167 aa0.34□□□□□ -2.35
AFP-207ENST00000515675 NAV2Q8IVL1 2488 aa0.34□□□□□ -2.36
AFP-207ENST00000515675 ZFYVE26Q68DK2 2539 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms