RNA–Protein interactions for RNA: ENST00000515675.1

AFP-207, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 317 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-207ENST00000515675 AEBP2Q6ZN18 517 aaPredicted RBP21.69■■□□□ 1.06
AFP-207ENST00000515675 CHIC1Q5VXU3 224 aa21.03■□□□□ 0.96
AFP-207ENST00000515675 PHF23Q9BUL5 403 aaPredicted RBP18.56■□□□□ 0.56
AFP-207ENST00000515675 SENP3Q9H4L4 574 aaPredicted RBP18.3■□□□□ 0.52
AFP-207ENST00000515675 FOXD1Q16676 465 aa17.07■□□□□ 0.32
AFP-207ENST00000515675 PLPPR3Q6T4P5 718 aa17■□□□□ 0.31
AFP-207ENST00000515675 PPP6R1Q9UPN7 881 aa16.42■□□□□ 0.22
AFP-207ENST00000515675 ADRA2BP18089 450 aa16.37■□□□□ 0.21
AFP-207ENST00000515675 PIAS4Q8N2W9 510 aaPredicted RBP16.03■□□□□ 0.16
AFP-207ENST00000515675 MSH5O43196 834 aa15.69■□□□□ 0.1
AFP-207ENST00000515675 PPP4R3CPQ6ZMV5 832 aa15.02■□□□□ -0
AFP-207ENST00000515675 MAPK8IP2Q13387 824 aaPredicted RBP14.92□□□□□ -0.02
AFP-207ENST00000515675 SCAF1Q9H7N4 1312 aaKnown RBP14.86□□□□□ -0.03
AFP-207ENST00000515675 DMRT2Q9Y5R5 561 aa14.63□□□□□ -0.07
AFP-207ENST00000515675 KCNA4P22459 653 aa14.61□□□□□ -0.07
AFP-207ENST00000515675 CNKSR2Q8WXI2 1034 aa14.58□□□□□ -0.08
AFP-207ENST00000515675 NCBP3Q53F19 620 aaKnown RBP14.52□□□□□ -0.09
AFP-207ENST00000515675 POTEDQ86YR6 584 aa14.51□□□□□ -0.09
AFP-207ENST00000515675 NPM3O75607 178 aaKnown RBP14.4□□□□□ -0.1
AFP-207ENST00000515675 RNF216Q9NWF9 866 aaPredicted RBP14.31□□□□□ -0.12
AFP-207ENST00000515675 HOXD11P31277 338 aaPredicted RBP14.3□□□□□ -0.12
AFP-207ENST00000515675 DCAF8L1A6NGE4 600 aa14□□□□□ -0.17
AFP-207ENST00000515675 DNAJC5BQ9UF47 199 aa13.93□□□□□ -0.18
AFP-207ENST00000515675 SLC4A1APQ9BWU0 796 aaKnown RBP13.85□□□□□ -0.19
AFP-207ENST00000515675 SLC4A2P04920 1241 aa13.65□□□□□ -0.22
AFP-207ENST00000515675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.61□□□□□ -0.23
AFP-207ENST00000515675 RNF39Q9H2S5 420 aa13.48□□□□□ -0.25
AFP-207ENST00000515675 ZBTB22O15209 634 aa13.47□□□□□ -0.25
AFP-207ENST00000515675 FOXD4L1Q9NU39 408 aa13.41□□□□□ -0.26
AFP-207ENST00000515675 U3KPZ7 1027 aaPredicted RBP13.41□□□□□ -0.26
AFP-207ENST00000515675 EHMT2Q96KQ7 1210 aa13.39□□□□□ -0.27
AFP-207ENST00000515675 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
AFP-207ENST00000515675 C1QBPQ07021 282 aaKnown RBP13.28□□□□□ -0.28
AFP-207ENST00000515675 MYCNP04198 464 aaPredicted RBP13.24□□□□□ -0.29
AFP-207ENST00000515675 CACNB1Q02641 598 aaPredicted RBP13.18□□□□□ -0.3
AFP-207ENST00000515675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.11□□□□□ -0.31
AFP-207ENST00000515675 HNRNPUL2Q1KMD3 747 aaKnown RBP13.11□□□□□ -0.31
AFP-207ENST00000515675 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
AFP-207ENST00000515675 SAMD1Q6SPF0 538 aaPredicted RBP13.09□□□□□ -0.31
AFP-207ENST00000515675 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
AFP-207ENST00000515675 CAPN15O75808 1086 aa12.99□□□□□ -0.33
AFP-207ENST00000515675 APLP2Q06481 763 aa12.96□□□□□ -0.33
AFP-207ENST00000515675 TRHP20396 242 aaPredicted RBP12.93□□□□□ -0.34
AFP-207ENST00000515675 ATXN8OSP0DMR3 200 aa12.92□□□□□ -0.34
AFP-207ENST00000515675 ZNF219Q9P2Y4 722 aaPredicted RBP12.86□□□□□ -0.35
AFP-207ENST00000515675 DSG3P32926 999 aa12.82□□□□□ -0.36
AFP-207ENST00000515675 ABCB7O75027 752 aa12.77□□□□□ -0.37
AFP-207ENST00000515675 POLA2Q14181 598 aa12.71□□□□□ -0.37
AFP-207ENST00000515675 MKRN4PQ13434 485 aaPredicted RBP12.42□□□□□ -0.42
AFP-207ENST00000515675 ZBTB12Q9Y330 459 aaPredicted RBP12.38□□□□□ -0.43
AFP-207ENST00000515675 FBLN2P98095 1184 aa12.34□□□□□ -0.43
AFP-207ENST00000515675 OSCARQ8IYS5 282 aa12.27□□□□□ -0.45
AFP-207ENST00000515675 RBM42Q9BTD8 480 aaKnown RBP12.12□□□□□ -0.47
AFP-207ENST00000515675 SPDYE2BA6NHP3 402 aa12.09□□□□□ -0.47
AFP-207ENST00000515675 SPDYE6P0CI01 402 aa12.09□□□□□ -0.47
AFP-207ENST00000515675 SPDYE2Q495Y8 402 aa12.09□□□□□ -0.47
AFP-207ENST00000515675 ZNF692Q9BU19 519 aaPredicted RBP12.07□□□□□ -0.48
AFP-207ENST00000515675 SPDYE4A6NLX3 237 aa12.04□□□□□ -0.48
AFP-207ENST00000515675 SSUH2Q9Y2M2 353 aa12.02□□□□□ -0.49
AFP-207ENST00000515675 FKBP8Q14318 412 aa12□□□□□ -0.49
AFP-207ENST00000515675 AKT1S1Q96B36 256 aa12□□□□□ -0.49
AFP-207ENST00000515675 REM2Q8IYK8 340 aaPredicted RBP11.93□□□□□ -0.5
AFP-207ENST00000515675 PABPN1Q86U42 306 aaKnown RBP eCLIP11.92□□□□□ -0.5
AFP-207ENST00000515675 PROM2Q8N271 834 aa11.85□□□□□ -0.51
AFP-207ENST00000515675 PITPNM1O00562 1244 aa11.79□□□□□ -0.52
AFP-207ENST00000515675 SPDYE1Q8NFV5 336 aaPredicted RBP11.75□□□□□ -0.53
AFP-207ENST00000515675 CLEC11AQ9Y240 323 aa11.75□□□□□ -0.53
AFP-207ENST00000515675 CHRDL2Q6WN34 429 aa11.71□□□□□ -0.53
AFP-207ENST00000515675 STAG3Q9UJ98 1225 aa11.64□□□□□ -0.55
AFP-207ENST00000515675 PRR29P0C7W0 189 aa11.62□□□□□ -0.55
AFP-207ENST00000515675 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.55
AFP-207ENST00000515675 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
AFP-207ENST00000515675 FBXO3Q9UK99 471 aa11.52□□□□□ -0.57
AFP-207ENST00000515675 CHADLQ6NUI6 762 aa11.51□□□□□ -0.57
AFP-207ENST00000515675 CREBZFQ9NS37 354 aa11.49□□□□□ -0.57
AFP-207ENST00000515675 PRKAR2AP13861 404 aaKnown RBP11.48□□□□□ -0.57
AFP-207ENST00000515675 POTEHQ6S545 545 aa11.45□□□□□ -0.58
AFP-207ENST00000515675 MIER1Q8N108 512 aa11.43□□□□□ -0.58
AFP-207ENST00000515675 VASPP50552 380 aaPredicted RBP11.41□□□□□ -0.58
AFP-207ENST00000515675 PLCD3Q8N3E9 789 aa11.38□□□□□ -0.59
AFP-207ENST00000515675 MNX1P50219 401 aaPredicted RBP11.37□□□□□ -0.59
AFP-207ENST00000515675 FARP1Q9Y4F1 1045 aaPredicted RBP11.35□□□□□ -0.59
AFP-207ENST00000515675 IFNLR1Q8IU57 520 aaPredicted RBP11.31□□□□□ -0.6
AFP-207ENST00000515675 PLEKHG5O94827 1062 aa11.3□□□□□ -0.6
AFP-207ENST00000515675 KLHL34Q8N239 644 aa11.23□□□□□ -0.61
AFP-207ENST00000515675 NPM1P06748 294 aaKnown RBP eCLIP11.22□□□□□ -0.61
AFP-207ENST00000515675 HAX1O00165 279 aa11.2□□□□□ -0.62
AFP-207ENST00000515675 EVX2Q03828 476 aa11.2□□□□□ -0.62
AFP-207ENST00000515675 ZBTB47Q9UFB7 747 aaPredicted RBP11.2□□□□□ -0.62
AFP-207ENST00000515675 C19orf67A6NJJ6 358 aa11.19□□□□□ -0.62
AFP-207ENST00000515675 NUBP1P53384 320 aa11.18□□□□□ -0.62
AFP-207ENST00000515675 RASEFQ8IZ41 740 aa11.15□□□□□ -0.62
AFP-207ENST00000515675 CD44P16070 742 aaKnown RBP11.14□□□□□ -0.63
AFP-207ENST00000515675 SPOCK2Q92563 424 aa11.12□□□□□ -0.63
AFP-207ENST00000515675 TSPYL2Q9H2G4 693 aaPredicted RBP11.1□□□□□ -0.63
AFP-207ENST00000515675 ZRANB1Q9UGI0 708 aa11.08□□□□□ -0.64
AFP-207ENST00000515675 DCAF8Q5TAQ9 597 aa11.04□□□□□ -0.64
AFP-207ENST00000515675 PAK3O75914 559 aaPredicted RBP11.02□□□□□ -0.65
AFP-207ENST00000515675 FAM212AQ96EL1 285 aa11.02□□□□□ -0.65
AFP-207ENST00000515675 CCDC61Q9Y6R9 512 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms