RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 A0A1W2PPR1 153 aa3.73□□□□□ -1.81
LINC01340-201ENST00000504012 DEFB116Q30KQ4 102 aa3.73□□□□□ -1.81
LINC01340-201ENST00000504012 IGFL1Q6UW32 110 aa3.73□□□□□ -1.81
LINC01340-201ENST00000504012 DEFB124Q8NES8 71 aa3.73□□□□□ -1.81
LINC01340-201ENST00000504012 MKI67P46013 3256 aaKnown RBP3.73□□□□□ -1.81
LINC01340-201ENST00000504012 LAMA2P24043 3122 aaKnown RBP3.73□□□□□ -1.81
LINC01340-201ENST00000504012 IGKV2-24A0A0C4DH68 120 aa3.72□□□□□ -1.81
LINC01340-201ENST00000504012 MMP24-AS1A0A0U1RRL7 71 aa3.72□□□□□ -1.81
LINC01340-201ENST00000504012 KRTAP23-1A1A580 65 aa3.72□□□□□ -1.81
LINC01340-201ENST00000504012 DEFB130BP0DP73 79 aa3.72□□□□□ -1.81
LINC01340-201ENST00000504012 DEFB130AP0DP74 79 aa3.72□□□□□ -1.81
LINC01340-201ENST00000504012 ACYP2P14621 99 aa3.72□□□□□ -1.81
LINC01340-201ENST00000504012 KRTAP26-1Q6PEX3 210 aa3.72□□□□□ -1.81
LINC01340-201ENST00000504012 CEP290O15078 2479 aa3.72□□□□□ -1.81
LINC01340-201ENST00000504012 TRIOO75962 3097 aa3.72□□□□□ -1.81
LINC01340-201ENST00000504012 PTPRZ1P23471 2315 aaPredicted RBP3.72□□□□□ -1.81
LINC01340-201ENST00000504012 AKAP6Q13023 2319 aa3.72□□□□□ -1.81
LINC01340-201ENST00000504012 IGLV5-52A0A0A0MRZ9 124 aa3.71□□□□□ -1.82
LINC01340-201ENST00000504012 UQCR11O14957 56 aa3.71□□□□□ -1.82
LINC01340-201ENST00000504012 DEFB136Q30KP8 78 aa3.71□□□□□ -1.82
LINC01340-201ENST00000504012 CSAG1Q6PB30 78 aa3.71□□□□□ -1.82
LINC01340-201ENST00000504012 PRO3102Q9H379 93 aa3.71□□□□□ -1.82
LINC01340-201ENST00000504012 MGAQ8IWI9 3026 aa3.7□□□□□ -1.82
LINC01340-201ENST00000504012 KALRNO60229 2985 aa3.7□□□□□ -1.82
LINC01340-201ENST00000504012 LAMA1P25391 3075 aa3.7□□□□□ -1.82
LINC01340-201ENST00000504012 VPS13AQ96RL7 3174 aa3.7□□□□□ -1.82
LINC01340-201ENST00000504012 A0A087WSZ3 146 aa3.7□□□□□ -1.82
LINC01340-201ENST00000504012 KRTAP16-1A8MUX0 517 aa3.7□□□□□ -1.82
LINC01340-201ENST00000504012 CHTF8P0CG12 524 aa3.7□□□□□ -1.82
LINC01340-201ENST00000504012 SPRR1BP22528 89 aa3.7□□□□□ -1.82
LINC01340-201ENST00000504012 ROMO1P60602 79 aa3.7□□□□□ -1.82
LINC01340-201ENST00000504012 MIR22HGQ0VDD5 57 aa3.7□□□□□ -1.82
LINC01340-201ENST00000504012 CASC10Q5T4H9 136 aa3.7□□□□□ -1.82
LINC01340-201ENST00000504012 C1orf134Q5TEV5 83 aa3.7□□□□□ -1.82
LINC01340-201ENST00000504012 REV3LO60673 3130 aa3.7□□□□□ -1.82
LINC01340-201ENST00000504012 REG3GQ6UW15 175 aa3.69□□□□□ -1.82
LINC01340-201ENST00000504012 C15orf56Q8N910 161 aa3.69□□□□□ -1.82
LINC01340-201ENST00000504012 CFAP54Q96N23 3096 aa3.69□□□□□ -1.82
LINC01340-201ENST00000504012 NCOR1O75376 2440 aa3.69□□□□□ -1.82
LINC01340-201ENST00000504012 FRYLO94915 3013 aa3.68□□□□□ -1.82
LINC01340-201ENST00000504012 C2CD3Q4AC94 2353 aa3.68□□□□□ -1.82
LINC01340-201ENST00000504012 PRRC2CQ9Y520 2896 aaKnown RBP3.68□□□□□ -1.82
LINC01340-201ENST00000504012 CREBBPQ92793 2442 aa3.68□□□□□ -1.82
LINC01340-201ENST00000504012 A0A1B0GU69 56 aa3.68□□□□□ -1.82
LINC01340-201ENST00000504012 ZNF861PO60384 105 aa3.68□□□□□ -1.82
LINC01340-201ENST00000504012 RPL37AP61513 92 aaKnown RBP3.68□□□□□ -1.82
LINC01340-201ENST00000504012 PCOTHQ58A44 107 aa3.68□□□□□ -1.82
LINC01340-201ENST00000504012 ABCA2Q9BZC7 2435 aa3.68□□□□□ -1.82
LINC01340-201ENST00000504012 SPTBN5Q9NRC6 3674 aaKnown RBP3.67□□□□□ -1.82
LINC01340-201ENST00000504012 H3BNG1 76 aa3.67□□□□□ -1.82
LINC01340-201ENST00000504012 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.67□□□□□ -1.82
LINC01340-201ENST00000504012 AKAP13Q12802 2813 aa3.66□□□□□ -1.82
LINC01340-201ENST00000504012 A0A096LPF7 62 aa3.66□□□□□ -1.82
LINC01340-201ENST00000504012 LAMA3Q16787 3333 aa3.65□□□□□ -1.82
LINC01340-201ENST00000504012 ZDBF2Q9HCK1 2354 aa3.65□□□□□ -1.83
LINC01340-201ENST00000504012 INAFM1C9JVW0 142 aa3.65□□□□□ -1.83
LINC01340-201ENST00000504012 KRTAP25-1Q3LHN0 102 aa3.65□□□□□ -1.83
LINC01340-201ENST00000504012 DMAC1Q96GE9 116 aa3.65□□□□□ -1.83
LINC01340-201ENST00000504012 C8orf17Q9NRJ1 99 aa3.65□□□□□ -1.83
LINC01340-201ENST00000504012 CFAP47Q6ZTR5 3102 aa3.65□□□□□ -1.83
LINC01340-201ENST00000504012 CCL19Q99731 98 aa3.64□□□□□ -1.83
LINC01340-201ENST00000504012 VCANP13611 3396 aa3.63□□□□□ -1.83
LINC01340-201ENST00000504012 SPTAN1Q13813 2472 aaKnown RBP3.63□□□□□ -1.83
LINC01340-201ENST00000504012 FAM168BA1KXE4 195 aa3.63□□□□□ -1.83
LINC01340-201ENST00000504012 TRIOBPQ9H2D6 2365 aa3.63□□□□□ -1.83
LINC01340-201ENST00000504012 FREM2Q5SZK8 3169 aa3.63□□□□□ -1.83
LINC01340-201ENST00000504012 TACC2O95359 2948 aa3.62□□□□□ -1.83
LINC01340-201ENST00000504012 MRPL34Q9BQ48 92 aaKnown RBP3.62□□□□□ -1.83
LINC01340-201ENST00000504012 IGLV7-43P04211 117 aa3.61□□□□□ -1.83
LINC01340-201ENST00000504012 SPART-AS1P0CW21 52 aa3.61□□□□□ -1.83
LINC01340-201ENST00000504012 KRTAP13-3Q3SY46 172 aa3.61□□□□□ -1.83
LINC01340-201ENST00000504012 PRUNE2Q8WUY3 3088 aa3.61□□□□□ -1.83
LINC01340-201ENST00000504012 WDFY3Q8IZQ1 3526 aa3.61□□□□□ -1.83
LINC01340-201ENST00000504012 CDH23Q9H251 3354 aa3.6□□□□□ -1.83
LINC01340-201ENST00000504012 A0A1B0GVX0 72 aa3.6□□□□□ -1.83
LINC01340-201ENST00000504012 NOTCH3Q9UM47 2321 aa3.59□□□□□ -1.83
LINC01340-201ENST00000504012 SPTA1P02549 2419 aa3.59□□□□□ -1.83
LINC01340-201ENST00000504012 K7ERS5 55 aa3.59□□□□□ -1.83
LINC01340-201ENST00000504012 LINC01556Q5JQF7 62 aa3.59□□□□□ -1.83
LINC01340-201ENST00000504012 CAMK2N1Q7Z7J9 78 aa3.59□□□□□ -1.83
LINC01340-201ENST00000504012 KRTAP7-1Q8IUC3 87 aa3.59□□□□□ -1.83
LINC01340-201ENST00000504012 Q96NJ1 140 aa3.59□□□□□ -1.83
LINC01340-201ENST00000504012 A0A0G2JQZ4 141 aa3.57□□□□□ -1.84
LINC01340-201ENST00000504012 A0A1W2PNN7 141 aa3.57□□□□□ -1.84
LINC01340-201ENST00000504012 MAP1AP78559 2803 aaPredicted RBP3.57□□□□□ -1.84
LINC01340-201ENST00000504012 ALMS1Q8TCU4 4167 aa3.57□□□□□ -1.84
LINC01340-201ENST00000504012 DMDP11532 3685 aa3.57□□□□□ -1.84
LINC01340-201ENST00000504012 A8MUU9 505 aa3.56□□□□□ -1.84
LINC01340-201ENST00000504012 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.56□□□□□ -1.84
LINC01340-201ENST00000504012 SPEGQ15772 3267 aa3.55□□□□□ -1.84
LINC01340-201ENST00000504012 ACACAQ13085 2346 aa3.55□□□□□ -1.84
LINC01340-201ENST00000504012 DMXL2Q8TDJ6 3036 aa3.55□□□□□ -1.84
LINC01340-201ENST00000504012 HRNRQ86YZ3 2850 aaPredicted RBP3.55□□□□□ -1.84
LINC01340-201ENST00000504012 LINC00483Q53H64 154 aa3.55□□□□□ -1.84
LINC01340-201ENST00000504012 WDFY4Q6ZS81 3184 aa3.55□□□□□ -1.84
LINC01340-201ENST00000504012 CHD6Q8TD26 2715 aa3.54□□□□□ -1.84
LINC01340-201ENST00000504012 P0C880 135 aa3.53□□□□□ -1.84
LINC01340-201ENST00000504012 DNAH10OSP0CZ25 163 aa3.53□□□□□ -1.84
LINC01340-201ENST00000504012 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
LINC01340-201ENST00000504012 SPG11Q96JI7 2443 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms