RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 LINC00472Q9H8W2 130 aa2.09□□□□□ -2.07
SUB1-202ENST00000502453 PIEZO1Q92508 2521 aa2.09□□□□□ -2.07
SUB1-202ENST00000502453 IGKV2-29A2NJV5 120 aaPredicted RBP2.09□□□□□ -2.07
SUB1-202ENST00000502453 MRPL33O75394 65 aaKnown RBP2.09□□□□□ -2.07
SUB1-202ENST00000502453 NDUFA3O95167 84 aa2.09□□□□□ -2.07
SUB1-202ENST00000502453 RPL37AP61513 92 aaKnown RBP2.09□□□□□ -2.07
SUB1-202ENST00000502453 KRTAP11-1Q8IUC1 163 aa2.09□□□□□ -2.07
SUB1-202ENST00000502453 SMIM2Q9BVW6 85 aa2.09□□□□□ -2.07
SUB1-202ENST00000502453 TACC2O95359 2948 aa2.09□□□□□ -2.07
SUB1-202ENST00000502453 TRGV4A0A0C4DH28 118 aa2.08□□□□□ -2.08
SUB1-202ENST00000502453 J3QKU1 62 aa2.08□□□□□ -2.08
SUB1-202ENST00000502453 ZNF625Q96I27 306 aaPredicted RBP2.08□□□□□ -2.08
SUB1-202ENST00000502453 CSMD3Q7Z407 3707 aa2.08□□□□□ -2.08
SUB1-202ENST00000502453 SPTBN4Q9H254 2564 aa2.08□□□□□ -2.08
SUB1-202ENST00000502453 FN1P02751 2386 aaKnown RBP2.08□□□□□ -2.08
SUB1-202ENST00000502453 RNASE3P12724 160 aaKnown RBP2.08□□□□□ -2.08
SUB1-202ENST00000502453 LINC00304Q8N9R0 145 aa2.08□□□□□ -2.08
SUB1-202ENST00000502453 COX14Q96I36 57 aa2.08□□□□□ -2.08
SUB1-202ENST00000502453 ABCA1O95477 2261 aa2.07□□□□□ -2.08
SUB1-202ENST00000502453 IGKV2-24A0A0C4DH68 120 aa2.07□□□□□ -2.08
SUB1-202ENST00000502453 HRNRQ86YZ3 2850 aaPredicted RBP2.07□□□□□ -2.08
SUB1-202ENST00000502453 LYSTQ99698 3801 aa2.07□□□□□ -2.08
SUB1-202ENST00000502453 FLNCQ14315 2725 aa2.07□□□□□ -2.08
SUB1-202ENST00000502453 H0Y9P7 68 aa2.07□□□□□ -2.08
SUB1-202ENST00000502453 PIGYQ3MUY2 71 aa2.07□□□□□ -2.08
SUB1-202ENST00000502453 NBDYA0A0U1RRE5 68 aa2.06□□□□□ -2.08
SUB1-202ENST00000502453 RPS27P42677 84 aaKnown RBP2.06□□□□□ -2.08
SUB1-202ENST00000502453 NF1P21359 2839 aa2.06□□□□□ -2.08
SUB1-202ENST00000502453 LINC00315P59091 139 aa2.06□□□□□ -2.08
SUB1-202ENST00000502453 C10orf55Q5SWW7 151 aa2.06□□□□□ -2.08
SUB1-202ENST00000502453 CACNA1CQ13936 2221 aa2.06□□□□□ -2.08
SUB1-202ENST00000502453 MUC6Q6W4X9 2439 aa2.06□□□□□ -2.08
SUB1-202ENST00000502453 COA5Q86WW8 74 aa2.05□□□□□ -2.08
SUB1-202ENST00000502453 TMEM167AQ8TBQ9 72 aa2.05□□□□□ -2.08
SUB1-202ENST00000502453 CD52P31358 61 aa2.05□□□□□ -2.08
SUB1-202ENST00000502453 UNC79Q9P2D8 2635 aa2.04□□□□□ -2.08
SUB1-202ENST00000502453 UQCR11O14957 56 aa2.04□□□□□ -2.08
SUB1-202ENST00000502453 CNFNQ9BYD5 112 aa2.04□□□□□ -2.08
SUB1-202ENST00000502453 IGKV2-40A0A087WW87 121 aaPredicted RBP2.04□□□□□ -2.08
SUB1-202ENST00000502453 IGKV2D-40P01614 121 aaPredicted RBP2.04□□□□□ -2.08
SUB1-202ENST00000502453 MGPP08493 103 aa2.04□□□□□ -2.08
SUB1-202ENST00000502453 Q96NJ1 140 aa2.04□□□□□ -2.08
SUB1-202ENST00000502453 KRTAP4-5Q9BYR2 181 aa2.04□□□□□ -2.08
SUB1-202ENST00000502453 GOLGA4Q13439 2230 aaKnown RBP2.04□□□□□ -2.08
SUB1-202ENST00000502453 MED13LQ71F56 2210 aa2.04□□□□□ -2.08
SUB1-202ENST00000502453 TRGV2A0A075B6R0 118 aa2.04□□□□□ -2.08
SUB1-202ENST00000502453 NCOR1O75376 2440 aa2.04□□□□□ -2.08
SUB1-202ENST00000502453 PRKDCP78527 4128 aaKnown RBP2.03□□□□□ -2.08
SUB1-202ENST00000502453 TRRAPQ9Y4A5 3859 aa2.03□□□□□ -2.08
SUB1-202ENST00000502453 PRR9Q5T870 116 aa2.03□□□□□ -2.08
SUB1-202ENST00000502453 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.02□□□□□ -2.09
SUB1-202ENST00000502453 LCE1AQ5T7P2 110 aa2.02□□□□□ -2.09
SUB1-202ENST00000502453 ANAPC11Q9NYG5 84 aa2.02□□□□□ -2.09
SUB1-202ENST00000502453 HAMPP81172 84 aa2.02□□□□□ -2.09
SUB1-202ENST00000502453 TEX15Q9BXT5 2789 aa2.02□□□□□ -2.09
SUB1-202ENST00000502453 DNAH7Q8WXX0 4024 aa2.02□□□□□ -2.09
SUB1-202ENST00000502453 ICE1Q9Y2F5 2266 aa2.02□□□□□ -2.09
SUB1-202ENST00000502453 DEFB114Q30KQ6 69 aa2.01□□□□□ -2.09
SUB1-202ENST00000502453 C5orf56Q8N8D9 126 aa2.01□□□□□ -2.09
SUB1-202ENST00000502453 HMCN1Q96RW7 5635 aa2.01□□□□□ -2.09
SUB1-202ENST00000502453 TRGV1A0A0A0MS02 117 aa2.01□□□□□ -2.09
SUB1-202ENST00000502453 NDUFA4O00483 81 aa2.01□□□□□ -2.09
SUB1-202ENST00000502453 LOC110117498A0A087WWA1 95 aa2.01□□□□□ -2.09
SUB1-202ENST00000502453 STATHP02808 62 aa2.01□□□□□ -2.09
SUB1-202ENST00000502453 KRTAP10-8P60410 259 aa2.01□□□□□ -2.09
SUB1-202ENST00000502453 SPINK9Q5DT21 86 aa2.01□□□□□ -2.09
SUB1-202ENST00000502453 RYR3Q15413 4870 aa2.01□□□□□ -2.09
SUB1-202ENST00000502453 NDUFA1O15239 70 aa2□□□□□ -2.09
SUB1-202ENST00000502453 IGKV4-1P06312 121 aa2□□□□□ -2.09
SUB1-202ENST00000502453 NCR3O14931 201 aa2□□□□□ -2.09
SUB1-202ENST00000502453 KRTAP13-2Q52LG2 175 aa2□□□□□ -2.09
SUB1-202ENST00000502453 KCNQ1DNQ9H478 68 aa2□□□□□ -2.09
SUB1-202ENST00000502453 CHD8Q9HCK8 2581 aa2□□□□□ -2.09
SUB1-202ENST00000502453 ACYP2P14621 99 aa2□□□□□ -2.09
SUB1-202ENST00000502453 GAFA1Q96PS6 74 aa2□□□□□ -2.09
SUB1-202ENST00000502453 OTOGLQ3ZCN5 2332 aa1.99□□□□□ -2.09
SUB1-202ENST00000502453 ASCC3Q8N3C0 2202 aaKnown RBP1.99□□□□□ -2.09
SUB1-202ENST00000502453 EPG5Q9HCE0 2579 aa1.99□□□□□ -2.09
SUB1-202ENST00000502453 GVINP1Q7Z2Y8 2422 aa1.99□□□□□ -2.09
SUB1-202ENST00000502453 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.99□□□□□ -2.09
SUB1-202ENST00000502453 ANKRD17O75179 2603 aaKnown RBP1.99□□□□□ -2.09
SUB1-202ENST00000502453 TNCP24821 2201 aa1.99□□□□□ -2.09
SUB1-202ENST00000502453 FRAS1Q86XX4 4008 aa1.99□□□□□ -2.09
SUB1-202ENST00000502453 APCP25054 2843 aa1.99□□□□□ -2.09
SUB1-202ENST00000502453 LINC00158P58513 81 aa1.99□□□□□ -2.09
SUB1-202ENST00000502453 DEFB112Q30KQ8 113 aa1.99□□□□□ -2.09
SUB1-202ENST00000502453 KMT2CQ8NEZ4 4911 aaKnown RBP1.98□□□□□ -2.09
SUB1-202ENST00000502453 DEFB108AA8MXU0 73 aa1.98□□□□□ -2.09
SUB1-202ENST00000502453 CENPEQ02224 2701 aa1.98□□□□□ -2.09
SUB1-202ENST00000502453 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
SUB1-202ENST00000502453 CEP295Q9C0D2 2601 aa1.98□□□□□ -2.09
SUB1-202ENST00000502453 ALMS1Q8TCU4 4167 aa1.97□□□□□ -2.09
SUB1-202ENST00000502453 LINC00308Q8TCZ7 52 aa1.97□□□□□ -2.09
SUB1-202ENST00000502453 BIRC6Q9NR09 4857 aa1.97□□□□□ -2.09
SUB1-202ENST00000502453 CACNA1GO43497 2377 aa1.97□□□□□ -2.09
SUB1-202ENST00000502453 ITPR2Q14571 2701 aa1.97□□□□□ -2.09
SUB1-202ENST00000502453 HELZ2Q9BYK8 2649 aaKnown RBP1.97□□□□□ -2.09
SUB1-202ENST00000502453 Q6ZQY7 126 aa1.97□□□□□ -2.09
SUB1-202ENST00000502453 CCL19Q99731 98 aa1.97□□□□□ -2.09
SUB1-202ENST00000502453 ANKRD11Q6UB99 2663 aaPredicted RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms