RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 ASCC3Q8N3C0 2202 aaKnown RBP1.48□□□□□ -2.17
XRN1-207ENST00000468894 ABCC8Q09428 1581 aa1.47□□□□□ -2.17
XRN1-207ENST00000468894 RANBP2P49792 3224 aaKnown RBP1.47□□□□□ -2.17
XRN1-207ENST00000468894 TRGV2A0A075B6R0 118 aa1.47□□□□□ -2.17
XRN1-207ENST00000468894 TRAV1-2A0A0B4J238 106 aa1.47□□□□□ -2.17
XRN1-207ENST00000468894 LCE6AA0A183 80 aa1.47□□□□□ -2.17
XRN1-207ENST00000468894 LINC00959A0A1B0GUT2 108 aa1.47□□□□□ -2.17
XRN1-207ENST00000468894 NDUFB1O75438 58 aa1.47□□□□□ -2.17
XRN1-207ENST00000468894 ARL14EPLP0DKL9 152 aa1.47□□□□□ -2.17
XRN1-207ENST00000468894 ENHOQ6UWT2 76 aa1.47□□□□□ -2.17
XRN1-207ENST00000468894 JMJD1CQ15652 2540 aa1.47□□□□□ -2.17
XRN1-207ENST00000468894 KALRNO60229 2985 aa1.47□□□□□ -2.17
XRN1-207ENST00000468894 REV3LO60673 3130 aa1.46□□□□□ -2.17
XRN1-207ENST00000468894 MKI67P46013 3256 aaKnown RBP1.46□□□□□ -2.18
XRN1-207ENST00000468894 AHCTF1Q8WYP5 2266 aa1.46□□□□□ -2.18
XRN1-207ENST00000468894 WFDC9Q8NEX5 89 aa1.46□□□□□ -2.18
XRN1-207ENST00000468894 VWFP04275 2813 aa1.46□□□□□ -2.18
XRN1-207ENST00000468894 E9PCH4 1651 aa1.45□□□□□ -2.18
XRN1-207ENST00000468894 MUC3AQ02505 3323 aa1.45□□□□□ -2.18
XRN1-207ENST00000468894 COL6A5A8TX70 2615 aa1.45□□□□□ -2.18
XRN1-207ENST00000468894 CAV3P56539 151 aa1.45□□□□□ -2.18
XRN1-207ENST00000468894 COA5Q86WW8 74 aa1.45□□□□□ -2.18
XRN1-207ENST00000468894 OBSCN-AS1Q96MR7 158 aa1.45□□□□□ -2.18
XRN1-207ENST00000468894 NAV3Q8IVL0 2385 aa1.44□□□□□ -2.18
XRN1-207ENST00000468894 LRRC37A2A6NM11 1700 aa1.44□□□□□ -2.18
XRN1-207ENST00000468894 TRBV6-1A0A0K0K1D8 114 aa1.44□□□□□ -2.18
XRN1-207ENST00000468894 Q6ZRN7 208 aaPredicted RBP1.44□□□□□ -2.18
XRN1-207ENST00000468894 ABRACLQ9P1F3 81 aa1.44□□□□□ -2.18
XRN1-207ENST00000468894 ZDBF2Q9HCK1 2354 aa1.44□□□□□ -2.18
XRN1-207ENST00000468894 GOLGB1Q14789 3259 aaKnown RBP1.44□□□□□ -2.18
XRN1-207ENST00000468894 FLG2Q5D862 2391 aaPredicted RBP1.43□□□□□ -2.18
XRN1-207ENST00000468894 DEFB112Q30KQ8 113 aa1.43□□□□□ -2.18
XRN1-207ENST00000468894 C10orf99Q6UWK7 81 aa1.43□□□□□ -2.18
XRN1-207ENST00000468894 CLTCL1P53675 1640 aa1.43□□□□□ -2.18
XRN1-207ENST00000468894 STAB1Q9NY15 2570 aa1.43□□□□□ -2.18
XRN1-207ENST00000468894 SSC5DA1L4H1 1573 aa1.42□□□□□ -2.18
XRN1-207ENST00000468894 MUC2Q02817 5179 aa1.42□□□□□ -2.18
XRN1-207ENST00000468894 SMIM27A0A1W2PRY6 76 aa1.42□□□□□ -2.18
XRN1-207ENST00000468894 ACYP2P14621 99 aa1.42□□□□□ -2.18
XRN1-207ENST00000468894 GAFA1Q96PS6 74 aa1.42□□□□□ -2.18
XRN1-207ENST00000468894 COL6A6A6NMZ7 2263 aa1.42□□□□□ -2.18
XRN1-207ENST00000468894 DNAH12Q6ZR08 3092 aa1.41□□□□□ -2.18
XRN1-207ENST00000468894 CNOT1A5YKK6 2376 aaKnown RBP1.41□□□□□ -2.18
XRN1-207ENST00000468894 M0R1W7 72 aa1.41□□□□□ -2.18
XRN1-207ENST00000468894 Q6ZQY7 126 aa1.41□□□□□ -2.18
XRN1-207ENST00000468894 KIAA1109Q2LD37 5005 aa1.41□□□□□ -2.18
XRN1-207ENST00000468894 DOPEY2Q9Y3R5 2298 aa1.41□□□□□ -2.18
XRN1-207ENST00000468894 TTC28Q96AY4 2481 aa1.41□□□□□ -2.18
XRN1-207ENST00000468894 NBEAL2Q6ZNJ1 2754 aa1.41□□□□□ -2.18
XRN1-207ENST00000468894 HMCN1Q96RW7 5635 aa1.4□□□□□ -2.19
XRN1-207ENST00000468894 A0A1B0GU69 56 aa1.4□□□□□ -2.19
XRN1-207ENST00000468894 G3V318 75 aa1.4□□□□□ -2.19
XRN1-207ENST00000468894 I3L3M4 83 aa1.4□□□□□ -2.19
XRN1-207ENST00000468894 NDUFA4O00483 81 aa1.4□□□□□ -2.19
XRN1-207ENST00000468894 CCL19Q99731 98 aa1.4□□□□□ -2.19
XRN1-207ENST00000468894 UBL5Q9BZL1 73 aa1.4□□□□□ -2.19
XRN1-207ENST00000468894 ATP7AQ04656 1500 aa1.4□□□□□ -2.19
XRN1-207ENST00000468894 TULP4Q9NRJ4 1543 aa1.4□□□□□ -2.19
XRN1-207ENST00000468894 ALMS1Q8TCU4 4167 aa1.4□□□□□ -2.19
XRN1-207ENST00000468894 MYO9AB2RTY4 2548 aa1.39□□□□□ -2.19
XRN1-207ENST00000468894 IGIPA6NJ69 53 aa1.39□□□□□ -2.19
XRN1-207ENST00000468894 COX6B1P14854 86 aa1.39□□□□□ -2.19
XRN1-207ENST00000468894 DEFB119Q8N690 84 aa1.39□□□□□ -2.19
XRN1-207ENST00000468894 A0A0G2JMZ2 1700 aa1.39□□□□□ -2.19
XRN1-207ENST00000468894 LRRC37AA6NMS7 1700 aa1.39□□□□□ -2.19
XRN1-207ENST00000468894 DNHD1Q96M86 4753 aa1.39□□□□□ -2.19
XRN1-207ENST00000468894 LMO7Q8WWI1 1683 aa1.39□□□□□ -2.19
XRN1-207ENST00000468894 SPINK4O60575 86 aa1.38□□□□□ -2.19
XRN1-207ENST00000468894 COX7BP24311 80 aa1.38□□□□□ -2.19
XRN1-207ENST00000468894 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.38□□□□□ -2.19
XRN1-207ENST00000468894 TIMM8BQ9Y5J9 83 aaPredicted RBP1.38□□□□□ -2.19
XRN1-207ENST00000468894 ANKHD1Q8IWZ3 2542 aaKnown RBP1.38□□□□□ -2.19
XRN1-207ENST00000468894 NOTCH1P46531 2555 aa1.38□□□□□ -2.19
XRN1-207ENST00000468894 DUOX1Q9NRD9 1551 aa1.38□□□□□ -2.19
XRN1-207ENST00000468894 SPEGQ15772 3267 aa1.37□□□□□ -2.19
XRN1-207ENST00000468894 FBN2P35556 2912 aa1.37□□□□□ -2.19
XRN1-207ENST00000468894 CFAP46Q8IYW2 2715 aa1.37□□□□□ -2.19
XRN1-207ENST00000468894 CCDC168Q8NDH2 2452 aa1.37□□□□□ -2.19
XRN1-207ENST00000468894 GCC2Q8IWJ2 1684 aa1.37□□□□□ -2.19
XRN1-207ENST00000468894 A0A096LNT2 108 aa1.37□□□□□ -2.19
XRN1-207ENST00000468894 PIN1P1O15428 100 aa1.37□□□□□ -2.19
XRN1-207ENST00000468894 PLNP26678 52 aa1.37□□□□□ -2.19
XRN1-207ENST00000468894 UNQ6190/PRO20217Q6UXQ8 127 aa1.37□□□□□ -2.19
XRN1-207ENST00000468894 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.37□□□□□ -2.19
XRN1-207ENST00000468894 PLCE1Q9P212 2302 aa1.37□□□□□ -2.19
XRN1-207ENST00000468894 RELNP78509 3460 aa1.36□□□□□ -2.19
XRN1-207ENST00000468894 GVQW2A0A096LPI5 108 aaPredicted RBP1.36□□□□□ -2.19
XRN1-207ENST00000468894 LINC01546A6NGU7 62 aa1.36□□□□□ -2.19
XRN1-207ENST00000468894 NCR3O14931 201 aa1.36□□□□□ -2.19
XRN1-207ENST00000468894 CENPFP49454 3210 aa1.36□□□□□ -2.19
XRN1-207ENST00000468894 KRTAP10-4P60372 401 aaPredicted RBP1.36□□□□□ -2.19
XRN1-207ENST00000468894 HAMPP81172 84 aa1.36□□□□□ -2.19
XRN1-207ENST00000468894 TENM4Q6N022 2769 aa1.36□□□□□ -2.19
XRN1-207ENST00000468894 LINC00575Q6W349 94 aa1.36□□□□□ -2.19
XRN1-207ENST00000468894 Q6ZRX8 168 aa1.36□□□□□ -2.19
XRN1-207ENST00000468894 SSBP3-AS1Q7Z2R9 100 aa1.36□□□□□ -2.19
XRN1-207ENST00000468894 SMIM11BQ8TCY0 68 aa1.36□□□□□ -2.19
XRN1-207ENST00000468894 C2CD3Q4AC94 2353 aa1.36□□□□□ -2.19
XRN1-207ENST00000468894 BOD1L1Q8NFC6 3051 aa1.36□□□□□ -2.19
XRN1-207ENST00000468894 BRCA2P51587 3418 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms