RNA–Protein interactions for RNA: ENST00000455013.2

C1DP3-201, Transcript of C1D nuclear receptor corepressor pseudogene 3, humanhuman

BASIC

Gene C1DP3, Length 423 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1DP3-201ENST00000455013 ITPR3Q14573 2671 aa0.68□□□□□ -2.3
C1DP3-201ENST00000455013 CFAP54Q96N23 3096 aa0.67□□□□□ -2.3
C1DP3-201ENST00000455013 SPINK1P00995 79 aa0.67□□□□□ -2.3
C1DP3-201ENST00000455013 IGF2RP11717 2491 aa0.67□□□□□ -2.3
C1DP3-201ENST00000455013 APC2O95996 2303 aa0.67□□□□□ -2.3
C1DP3-201ENST00000455013 SPG11Q96JI7 2443 aa0.67□□□□□ -2.3
C1DP3-201ENST00000455013 PLIN4Q96Q06 1357 aa0.67□□□□□ -2.3
C1DP3-201ENST00000455013 MKI67P46013 3256 aaKnown RBP0.67□□□□□ -2.3
C1DP3-201ENST00000455013 VCANP13611 3396 aa0.66□□□□□ -2.3
C1DP3-201ENST00000455013 AHNAK2Q8IVF2 5795 aa0.66□□□□□ -2.3
C1DP3-201ENST00000455013 ATOX1O00244 68 aa0.66□□□□□ -2.3
C1DP3-201ENST00000455013 Q8IZM0 81 aa0.66□□□□□ -2.3
C1DP3-201ENST00000455013 PMCHL2Q9BQD1 86 aa0.66□□□□□ -2.3
C1DP3-201ENST00000455013 PRO1933Q9H354 126 aa0.66□□□□□ -2.3
C1DP3-201ENST00000455013 LAMA3Q16787 3333 aa0.66□□□□□ -2.3
C1DP3-201ENST00000455013 DNAH12Q6ZR08 3092 aa0.66□□□□□ -2.3
C1DP3-201ENST00000455013 CSPG4Q6UVK1 2322 aa0.66□□□□□ -2.3
C1DP3-201ENST00000455013 UBR5O95071 2799 aaPredicted RBP0.66□□□□□ -2.3
C1DP3-201ENST00000455013 CFAP47Q6ZTR5 3102 aa0.66□□□□□ -2.3
C1DP3-201ENST00000455013 ZFHX4Q86UP3 3567 aa0.66□□□□□ -2.3
C1DP3-201ENST00000455013 IGSF10Q6WRI0 2623 aa0.66□□□□□ -2.3
C1DP3-201ENST00000455013 EYSQ5T1H1 3165 aa0.65□□□□□ -2.3
C1DP3-201ENST00000455013 TENM4Q6N022 2769 aa0.65□□□□□ -2.3
C1DP3-201ENST00000455013 TEX15Q9BXT5 2789 aa0.65□□□□□ -2.3
C1DP3-201ENST00000455013 TLN1Q9Y490 2541 aaKnown RBP0.65□□□□□ -2.31
C1DP3-201ENST00000455013 ATRQ13535 2644 aa0.65□□□□□ -2.31
C1DP3-201ENST00000455013 CEP295Q9C0D2 2601 aa0.65□□□□□ -2.31
C1DP3-201ENST00000455013 TRBV25-1A0A075B6N4 114 aa0.65□□□□□ -2.31
C1DP3-201ENST00000455013 UQCRHLA0A096LP55 91 aa0.65□□□□□ -2.31
C1DP3-201ENST00000455013 SPTY2D1-AS1A0A0U1RR47 76 aa0.65□□□□□ -2.31
C1DP3-201ENST00000455013 H7BZZ5 65 aa0.65□□□□□ -2.31
C1DP3-201ENST00000455013 PKIAP61925 76 aa0.65□□□□□ -2.31
C1DP3-201ENST00000455013 DEFB133Q30KQ1 61 aa0.65□□□□□ -2.31
C1DP3-201ENST00000455013 DEFB121Q5J5C9 76 aa0.65□□□□□ -2.31
C1DP3-201ENST00000455013 COL5A1-AS1Q5SY13 56 aa0.65□□□□□ -2.31
C1DP3-201ENST00000455013 SERP2Q8N6R1 65 aa0.65□□□□□ -2.31
C1DP3-201ENST00000455013 FDCSPQ8NFU4 85 aa0.65□□□□□ -2.31
C1DP3-201ENST00000455013 SPTBN1Q01082 2364 aaKnown RBP0.65□□□□□ -2.31
C1DP3-201ENST00000455013 SETD2Q9BYW2 2564 aaPredicted RBP0.65□□□□□ -2.31
C1DP3-201ENST00000455013 MUC3AQ02505 3323 aa0.65□□□□□ -2.31
C1DP3-201ENST00000455013 BRCA2P51587 3418 aa0.65□□□□□ -2.31
C1DP3-201ENST00000455013 PLCE1Q9P212 2302 aa0.65□□□□□ -2.31
C1DP3-201ENST00000455013 C5orf42Q9H799 3197 aa0.65□□□□□ -2.31
C1DP3-201ENST00000455013 ANKHD1Q8IWZ3 2542 aaKnown RBP0.65□□□□□ -2.31
C1DP3-201ENST00000455013 CFAP46Q8IYW2 2715 aa0.65□□□□□ -2.31
C1DP3-201ENST00000455013 REV3LO60673 3130 aa0.64□□□□□ -2.31
C1DP3-201ENST00000455013 HTTP42858 3142 aa0.64□□□□□ -2.31
C1DP3-201ENST00000455013 USP34Q70CQ2 3546 aa0.64□□□□□ -2.31
C1DP3-201ENST00000455013 PRUNE2Q8WUY3 3088 aa0.64□□□□□ -2.31
C1DP3-201ENST00000455013 MYO7BQ6PIF6 2116 aa0.64□□□□□ -2.31
C1DP3-201ENST00000455013 HIVEP3Q5T1R4 2406 aa0.64□□□□□ -2.31
C1DP3-201ENST00000455013 CENPFP49454 3210 aa0.64□□□□□ -2.31
C1DP3-201ENST00000455013 TRBV6-1A0A0K0K1D8 114 aa0.64□□□□□ -2.31
C1DP3-201ENST00000455013 LCE6AA0A183 80 aa0.64□□□□□ -2.31
C1DP3-201ENST00000455013 STATHP02808 62 aa0.64□□□□□ -2.31
C1DP3-201ENST00000455013 HMGA1P17096 107 aaKnown RBP0.64□□□□□ -2.31
C1DP3-201ENST00000455013 TRGV9Q99603 122 aa0.64□□□□□ -2.31
C1DP3-201ENST00000455013 USP9YO00507 2555 aaPredicted RBP0.64□□□□□ -2.31
C1DP3-201ENST00000455013 OTOGQ6ZRI0 2925 aa0.64□□□□□ -2.31
C1DP3-201ENST00000455013 DCHS1Q96JQ0 3298 aa0.63□□□□□ -2.31
C1DP3-201ENST00000455013 CCDC168Q8NDH2 2452 aa0.63□□□□□ -2.31
C1DP3-201ENST00000455013 KALRNO60229 2985 aa0.63□□□□□ -2.31
C1DP3-201ENST00000455013 U3KQA8 63 aa0.63□□□□□ -2.31
C1DP3-201ENST00000455013 ITPR1Q14643 2758 aa0.63□□□□□ -2.31
C1DP3-201ENST00000455013 WDR87Q6ZQQ6 2873 aa0.63□□□□□ -2.31
C1DP3-201ENST00000455013 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.63□□□□□ -2.31
C1DP3-201ENST00000455013 STAB1Q9NY15 2570 aa0.62□□□□□ -2.31
C1DP3-201ENST00000455013 BPTFQ12830 3046 aa0.62□□□□□ -2.31
C1DP3-201ENST00000455013 FLNCQ14315 2725 aa0.62□□□□□ -2.31
C1DP3-201ENST00000455013 A0A0G2JND7 137 aa0.62□□□□□ -2.31
C1DP3-201ENST00000455013 PHGR1C9JFL3 82 aa0.62□□□□□ -2.31
C1DP3-201ENST00000455013 TFF3Q07654 80 aa0.62□□□□□ -2.31
C1DP3-201ENST00000455013 PMCHL1Q16048 86 aa0.62□□□□□ -2.31
C1DP3-201ENST00000455013 PIGYQ3MUY2 71 aa0.62□□□□□ -2.31
C1DP3-201ENST00000455013 NBEAL1Q6ZS30 2694 aa0.62□□□□□ -2.31
C1DP3-201ENST00000455013 ZFHX3Q15911 3703 aa0.62□□□□□ -2.31
C1DP3-201ENST00000455013 DSPP15924 2871 aaKnown RBP0.61□□□□□ -2.31
C1DP3-201ENST00000455013 PDCD11Q14690 1871 aaKnown RBP0.61□□□□□ -2.31
C1DP3-201ENST00000455013 WDFY4Q6ZS81 3184 aa0.61□□□□□ -2.31
C1DP3-201ENST00000455013 LINC01600Q96MT4 127 aa0.61□□□□□ -2.31
C1DP3-201ENST00000455013 VAMP8Q9BV40 100 aa0.61□□□□□ -2.31
C1DP3-201ENST00000455013 SNHG12Q9BXW3 62 aa0.61□□□□□ -2.31
C1DP3-201ENST00000455013 HIVEP1P15822 2718 aa0.61□□□□□ -2.31
C1DP3-201ENST00000455013 COL6A5A8TX70 2615 aa0.61□□□□□ -2.31
C1DP3-201ENST00000455013 DMXL1Q9Y485 3027 aa0.61□□□□□ -2.31
C1DP3-201ENST00000455013 WNK1Q9H4A3 2382 aa0.61□□□□□ -2.31
C1DP3-201ENST00000455013 TLN2Q9Y4G6 2542 aa0.61□□□□□ -2.31
C1DP3-201ENST00000455013 DNAH14Q0VDD8 3507 aa0.6□□□□□ -2.31
C1DP3-201ENST00000455013 PKDREJQ9NTG1 2253 aa0.6□□□□□ -2.31
C1DP3-201ENST00000455013 SONP18583 2426 aaKnown RBP0.6□□□□□ -2.31
C1DP3-201ENST00000455013 FLNAP21333 2647 aaKnown RBP0.6□□□□□ -2.31
C1DP3-201ENST00000455013 CDH23Q9H251 3354 aa0.6□□□□□ -2.31
C1DP3-201ENST00000455013 CHD7Q9P2D1 2997 aa0.6□□□□□ -2.31
C1DP3-201ENST00000455013 FRYQ5TBA9 3013 aa0.59□□□□□ -2.31
C1DP3-201ENST00000455013 XIRP2A4UGR9 3374 aa0.59□□□□□ -2.31
C1DP3-201ENST00000455013 KNL1Q8NG31 2342 aa0.59□□□□□ -2.31
C1DP3-201ENST00000455013 NF1P21359 2839 aa0.59□□□□□ -2.31
C1DP3-201ENST00000455013 DMXL2Q8TDJ6 3036 aa0.59□□□□□ -2.31
C1DP3-201ENST00000455013 SNRPFP62306 86 aaKnown RBP0.59□□□□□ -2.31
C1DP3-201ENST00000455013 LCN9Q8WX39 176 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms