RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 FN1P02751 2386 aaKnown RBP2.1□□□□□ -2.07
UBR3-206ENST00000444475 ITPR2Q14571 2701 aa2.1□□□□□ -2.07
UBR3-206ENST00000444475 LRRK2Q5S007 2527 aa2.1□□□□□ -2.07
UBR3-206ENST00000444475 LINC00315P59091 139 aa2.1□□□□□ -2.07
UBR3-206ENST00000444475 RYR3Q15413 4870 aa2.1□□□□□ -2.07
UBR3-206ENST00000444475 TRIOO75962 3097 aa2.1□□□□□ -2.07
UBR3-206ENST00000444475 MRPS21P82921 87 aaKnown RBP2.1□□□□□ -2.07
UBR3-206ENST00000444475 DMXL2Q8TDJ6 3036 aa2.1□□□□□ -2.07
UBR3-206ENST00000444475 RELNP78509 3460 aa2.09□□□□□ -2.07
UBR3-206ENST00000444475 TRAV1-2A0A0B4J238 106 aa2.09□□□□□ -2.07
UBR3-206ENST00000444475 TRBV6-1A0A0K0K1D8 114 aa2.09□□□□□ -2.07
UBR3-206ENST00000444475 INE1O15225 51 aa2.09□□□□□ -2.07
UBR3-206ENST00000444475 SNRPGP62308 76 aaKnown RBP2.09□□□□□ -2.07
UBR3-206ENST00000444475 IGKV2-29A2NJV5 120 aaPredicted RBP2.09□□□□□ -2.07
UBR3-206ENST00000444475 RPL37AP61513 92 aaKnown RBP2.09□□□□□ -2.07
UBR3-206ENST00000444475 CACNA1EQ15878 2313 aa2.09□□□□□ -2.08
UBR3-206ENST00000444475 DNAL4O96015 105 aa2.09□□□□□ -2.08
UBR3-206ENST00000444475 WFDC10AQ9H1F0 79 aa2.09□□□□□ -2.08
UBR3-206ENST00000444475 NOTCH2Q04721 2471 aa2.09□□□□□ -2.08
UBR3-206ENST00000444475 MTORP42345 2549 aa2.08□□□□□ -2.08
UBR3-206ENST00000444475 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.08□□□□□ -2.08
UBR3-206ENST00000444475 IGLV6-57P01721 117 aa2.08□□□□□ -2.08
UBR3-206ENST00000444475 DEFB134Q4QY38 66 aa2.08□□□□□ -2.08
UBR3-206ENST00000444475 ICE1Q9Y2F5 2266 aa2.08□□□□□ -2.08
UBR3-206ENST00000444475 ASPMQ8IZT6 3477 aa2.08□□□□□ -2.08
UBR3-206ENST00000444475 TRAV40A0A0B4J280 105 aa2.08□□□□□ -2.08
UBR3-206ENST00000444475 TRGV4A0A0C4DH28 118 aa2.08□□□□□ -2.08
UBR3-206ENST00000444475 M0R2N4 97 aa2.08□□□□□ -2.08
UBR3-206ENST00000444475 CD52P31358 61 aa2.08□□□□□ -2.08
UBR3-206ENST00000444475 KRTAP13-2Q52LG2 175 aa2.08□□□□□ -2.08
UBR3-206ENST00000444475 C10orf113Q5VZT2 155 aa2.08□□□□□ -2.08
UBR3-206ENST00000444475 ANKHD1Q8IWZ3 2542 aaKnown RBP2.07□□□□□ -2.08
UBR3-206ENST00000444475 IGKV4-1P06312 121 aa2.07□□□□□ -2.08
UBR3-206ENST00000444475 SERF2P84101 59 aa2.07□□□□□ -2.08
UBR3-206ENST00000444475 Q8N3U1 123 aa2.07□□□□□ -2.08
UBR3-206ENST00000444475 DOCK10Q96BY6 2186 aa2.07□□□□□ -2.08
UBR3-206ENST00000444475 FRYLO94915 3013 aa2.07□□□□□ -2.08
UBR3-206ENST00000444475 TRGV1A0A0A0MS02 117 aa2.07□□□□□ -2.08
UBR3-206ENST00000444475 SDK1Q7Z5N4 2213 aa2.06□□□□□ -2.08
UBR3-206ENST00000444475 KRTAP10-9P60411 292 aa2.06□□□□□ -2.08
UBR3-206ENST00000444475 WFDC9Q8NEX5 89 aa2.06□□□□□ -2.08
UBR3-206ENST00000444475 PCLOQ9Y6V0 5065 aa2.06□□□□□ -2.08
UBR3-206ENST00000444475 FLNCQ14315 2725 aa2.06□□□□□ -2.08
UBR3-206ENST00000444475 KRTAP1-4P0C5Y4 121 aa2.06□□□□□ -2.08
UBR3-206ENST00000444475 PLNP26678 52 aa2.06□□□□□ -2.08
UBR3-206ENST00000444475 FCER1GP30273 86 aa2.06□□□□□ -2.08
UBR3-206ENST00000444475 NAV3Q8IVL0 2385 aa2.05□□□□□ -2.08
UBR3-206ENST00000444475 CTXND1A0A1B0GTU2 59 aa2.05□□□□□ -2.08
UBR3-206ENST00000444475 FXYD4P59646 89 aa2.05□□□□□ -2.08
UBR3-206ENST00000444475 TMEM14CQ9P0S9 112 aa2.05□□□□□ -2.08
UBR3-206ENST00000444475 PRRC2AP48634 2157 aaKnown RBP2.05□□□□□ -2.08
UBR3-206ENST00000444475 DSCR10P59022 87 aa2.05□□□□□ -2.08
UBR3-206ENST00000444475 Q6ZRN7 208 aaPredicted RBP2.05□□□□□ -2.08
UBR3-206ENST00000444475 LRBAP50851 2863 aa2.05□□□□□ -2.08
UBR3-206ENST00000444475 I3L3M4 83 aa2.04□□□□□ -2.08
UBR3-206ENST00000444475 APCP25054 2843 aa2.04□□□□□ -2.08
UBR3-206ENST00000444475 IGKV3-15P01624 115 aa2.04□□□□□ -2.08
UBR3-206ENST00000444475 SEC16AO15027 2179 aa2.03□□□□□ -2.08
UBR3-206ENST00000444475 COX17Q14061 63 aa2.03□□□□□ -2.08
UBR3-206ENST00000444475 VPS13AQ96RL7 3174 aa2.03□□□□□ -2.08
UBR3-206ENST00000444475 NBASA2RRP1 2371 aa2.03□□□□□ -2.08
UBR3-206ENST00000444475 Q8N9L7 120 aa2.03□□□□□ -2.08
UBR3-206ENST00000444475 JMJD1CQ15652 2540 aa2.03□□□□□ -2.08
UBR3-206ENST00000444475 CCDC168Q8NDH2 2452 aa2.03□□□□□ -2.08
UBR3-206ENST00000444475 ATRQ13535 2644 aa2.03□□□□□ -2.08
UBR3-206ENST00000444475 H3BRN7 92 aa2.03□□□□□ -2.08
UBR3-206ENST00000444475 UBL5Q9BZL1 73 aa2.03□□□□□ -2.08
UBR3-206ENST00000444475 SHANK1Q9Y566 2161 aa2.03□□□□□ -2.09
UBR3-206ENST00000444475 DYNC2H1Q8NCM8 4307 aaKnown RBP2.03□□□□□ -2.09
UBR3-206ENST00000444475 HERC2O95714 4834 aa2.03□□□□□ -2.09
UBR3-206ENST00000444475 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.09
UBR3-206ENST00000444475 ALMS1Q8TCU4 4167 aa2.02□□□□□ -2.09
UBR3-206ENST00000444475 TRGV2A0A075B6R0 118 aa2.02□□□□□ -2.09
UBR3-206ENST00000444475 DEFB114Q30KQ6 69 aa2.02□□□□□ -2.09
UBR3-206ENST00000444475 COA5Q86WW8 74 aa2.02□□□□□ -2.09
UBR3-206ENST00000444475 KCNQ1DNQ9H478 68 aa2.02□□□□□ -2.09
UBR3-206ENST00000444475 SPTBN1Q01082 2364 aaKnown RBP2.01□□□□□ -2.09
UBR3-206ENST00000444475 M0R1W7 72 aa2.01□□□□□ -2.09
UBR3-206ENST00000444475 CACNA1CQ13936 2221 aa2□□□□□ -2.09
UBR3-206ENST00000444475 ANAPC11Q9NYG5 84 aa2□□□□□ -2.09
UBR3-206ENST00000444475 G3V318 75 aa2□□□□□ -2.09
UBR3-206ENST00000444475 NDUFA4O00483 81 aa2□□□□□ -2.09
UBR3-206ENST00000444475 GAFA1Q96PS6 74 aa2□□□□□ -2.09
UBR3-206ENST00000444475 RP1L1Q8IWN7 2480 aaPredicted RBP2□□□□□ -2.09
UBR3-206ENST00000444475 CELSR2Q9HCU4 2923 aa2□□□□□ -2.09
UBR3-206ENST00000444475 KRTAP9-7A8MTY7 169 aa1.99□□□□□ -2.09
UBR3-206ENST00000444475 DEFB112Q30KQ8 113 aa1.99□□□□□ -2.09
UBR3-206ENST00000444475 LOC400499M0QZD8 3231 aa1.99□□□□□ -2.09
UBR3-206ENST00000444475 DNAH1Q9P2D7 4330 aa1.99□□□□□ -2.09
UBR3-206ENST00000444475 STAB1Q9NY15 2570 aa1.99□□□□□ -2.09
UBR3-206ENST00000444475 BSNQ9UPA5 3926 aa1.98□□□□□ -2.09
UBR3-206ENST00000444475 A0A096LNT2 108 aa1.98□□□□□ -2.09
UBR3-206ENST00000444475 CSPG4Q6UVK1 2322 aa1.98□□□□□ -2.09
UBR3-206ENST00000444475 NSD1Q96L73 2696 aaPredicted RBP1.98□□□□□ -2.09
UBR3-206ENST00000444475 FREM2Q5SZK8 3169 aa1.98□□□□□ -2.09
UBR3-206ENST00000444475 C10orf99Q6UWK7 81 aa1.98□□□□□ -2.09
UBR3-206ENST00000444475 F5P12259 2224 aa1.98□□□□□ -2.09
UBR3-206ENST00000444475 RTTNQ86VV8 2226 aa1.98□□□□□ -2.09
UBR3-206ENST00000444475 ALPK2Q86TB3 2170 aa1.98□□□□□ -2.09
UBR3-206ENST00000444475 HMGA2P52926 109 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms