RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 LRRK2Q5S007 2527 aa1.72□□□□□ -2.13
HMGB1P12-201ENST00000438594 CACNA1BQ00975 2339 aa1.72□□□□□ -2.13
HMGB1P12-201ENST00000438594 CHD9Q3L8U1 2897 aa1.72□□□□□ -2.13
HMGB1P12-201ENST00000438594 RANBP2P49792 3224 aaKnown RBP1.72□□□□□ -2.13
HMGB1P12-201ENST00000438594 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
HMGB1P12-201ENST00000438594 UBL5Q9BZL1 73 aa1.71□□□□□ -2.14
HMGB1P12-201ENST00000438594 SZT2Q5T011 3432 aa1.71□□□□□ -2.14
HMGB1P12-201ENST00000438594 MYO15AQ9UKN7 3530 aa1.71□□□□□ -2.14
HMGB1P12-201ENST00000438594 ANKHD1Q8IWZ3 2542 aaKnown RBP1.71□□□□□ -2.14
HMGB1P12-201ENST00000438594 CHD7Q9P2D1 2997 aa1.71□□□□□ -2.14
HMGB1P12-201ENST00000438594 PCLOQ9Y6V0 5065 aa1.7□□□□□ -2.14
HMGB1P12-201ENST00000438594 NOTCH1P46531 2555 aa1.7□□□□□ -2.14
HMGB1P12-201ENST00000438594 NDUFA4O00483 81 aa1.7□□□□□ -2.14
HMGB1P12-201ENST00000438594 KRTAP13-4Q3LI77 160 aa1.7□□□□□ -2.14
HMGB1P12-201ENST00000438594 DNAH12Q6ZR08 3092 aa1.7□□□□□ -2.14
HMGB1P12-201ENST00000438594 SMIM11BQ8TCY0 68 aa1.7□□□□□ -2.14
HMGB1P12-201ENST00000438594 ICE1Q9Y2F5 2266 aa1.7□□□□□ -2.14
HMGB1P12-201ENST00000438594 VWFP04275 2813 aa1.7□□□□□ -2.14
HMGB1P12-201ENST00000438594 COX7BP24311 80 aa1.69□□□□□ -2.14
HMGB1P12-201ENST00000438594 CD52P31358 61 aa1.69□□□□□ -2.14
HMGB1P12-201ENST00000438594 HAMPP81172 84 aa1.69□□□□□ -2.14
HMGB1P12-201ENST00000438594 UNQ6190/PRO20217Q6UXQ8 127 aa1.69□□□□□ -2.14
HMGB1P12-201ENST00000438594 ABCA1O95477 2261 aa1.69□□□□□ -2.14
HMGB1P12-201ENST00000438594 CCDC168Q8NDH2 2452 aa1.68□□□□□ -2.14
HMGB1P12-201ENST00000438594 DNAH14Q0VDD8 3507 aa1.68□□□□□ -2.14
HMGB1P12-201ENST00000438594 NCR3O14931 201 aa1.68□□□□□ -2.14
HMGB1P12-201ENST00000438594 SSBP3-AS1Q7Z2R9 100 aa1.68□□□□□ -2.14
HMGB1P12-201ENST00000438594 F5P12259 2224 aa1.68□□□□□ -2.14
HMGB1P12-201ENST00000438594 XIRP2A4UGR9 3374 aa1.68□□□□□ -2.14
HMGB1P12-201ENST00000438594 VCANP13611 3396 aa1.68□□□□□ -2.14
HMGB1P12-201ENST00000438594 MUC3AQ02505 3323 aa1.68□□□□□ -2.14
HMGB1P12-201ENST00000438594 WDFY4Q6ZS81 3184 aa1.67□□□□□ -2.14
HMGB1P12-201ENST00000438594 ASH1LQ9NR48 2969 aaKnown RBP1.67□□□□□ -2.14
HMGB1P12-201ENST00000438594 COL6A5A8TX70 2615 aa1.67□□□□□ -2.14
HMGB1P12-201ENST00000438594 ABRACLQ9P1F3 81 aa1.67□□□□□ -2.14
HMGB1P12-201ENST00000438594 UNC80Q8N2C7 3258 aa1.67□□□□□ -2.14
HMGB1P12-201ENST00000438594 SPRR5A0A1B0GTR4 108 aa1.66□□□□□ -2.14
HMGB1P12-201ENST00000438594 IGIPA6NJ69 53 aa1.66□□□□□ -2.14
HMGB1P12-201ENST00000438594 LY6G6CO95867 125 aa1.66□□□□□ -2.14
HMGB1P12-201ENST00000438594 RPS27LQ71UM5 84 aaKnown RBP1.66□□□□□ -2.14
HMGB1P12-201ENST00000438594 COX14Q96I36 57 aa1.66□□□□□ -2.14
HMGB1P12-201ENST00000438594 KIAA1109Q2LD37 5005 aa1.66□□□□□ -2.14
HMGB1P12-201ENST00000438594 GCN1Q92616 2671 aaKnown RBP1.66□□□□□ -2.14
HMGB1P12-201ENST00000438594 NCOR1O75376 2440 aa1.66□□□□□ -2.14
HMGB1P12-201ENST00000438594 TRIOBPQ9H2D6 2365 aa1.65□□□□□ -2.14
HMGB1P12-201ENST00000438594 SPENQ96T58 3664 aaKnown RBP1.65□□□□□ -2.15
HMGB1P12-201ENST00000438594 CACNA1CQ13936 2221 aa1.65□□□□□ -2.15
HMGB1P12-201ENST00000438594 SMIM27A0A1W2PRY6 76 aa1.65□□□□□ -2.15
HMGB1P12-201ENST00000438594 M0R1W7 72 aa1.65□□□□□ -2.15
HMGB1P12-201ENST00000438594 CCL22O00626 93 aa1.65□□□□□ -2.15
HMGB1P12-201ENST00000438594 PRB1P04280 392 aa1.65□□□□□ -2.15
HMGB1P12-201ENST00000438594 ARL14EPLP0DKL9 152 aa1.65□□□□□ -2.15
HMGB1P12-201ENST00000438594 REV3LO60673 3130 aa1.65□□□□□ -2.15
HMGB1P12-201ENST00000438594 DMDP11532 3685 aa1.65□□□□□ -2.15
HMGB1P12-201ENST00000438594 LAMA2P24043 3122 aaKnown RBP1.64□□□□□ -2.15
HMGB1P12-201ENST00000438594 I3L3M4 83 aa1.64□□□□□ -2.15
HMGB1P12-201ENST00000438594 PIN1P1O15428 100 aa1.64□□□□□ -2.15
HMGB1P12-201ENST00000438594 DEFB103AP81534 67 aa1.64□□□□□ -2.15
HMGB1P12-201ENST00000438594 SPINK13Q1W4C9 94 aa1.64□□□□□ -2.15
HMGB1P12-201ENST00000438594 DEFB114Q30KQ6 69 aa1.64□□□□□ -2.15
HMGB1P12-201ENST00000438594 KCNQ1DNQ9H478 68 aa1.64□□□□□ -2.15
HMGB1P12-201ENST00000438594 WDFY3Q8IZQ1 3526 aa1.64□□□□□ -2.15
HMGB1P12-201ENST00000438594 NAV3Q8IVL0 2385 aa1.64□□□□□ -2.15
HMGB1P12-201ENST00000438594 CPSF4LA6NMK7 179 aaKnown RBP1.63□□□□□ -2.15
HMGB1P12-201ENST00000438594 COX6B1P14854 86 aa1.63□□□□□ -2.15
HMGB1P12-201ENST00000438594 PLNP26678 52 aa1.63□□□□□ -2.15
HMGB1P12-201ENST00000438594 RPL37P61927 97 aaKnown RBP1.63□□□□□ -2.15
HMGB1P12-201ENST00000438594 RPL38P63173 70 aaKnown RBP1.63□□□□□ -2.15
HMGB1P12-201ENST00000438594 LINC00575Q6W349 94 aa1.63□□□□□ -2.15
HMGB1P12-201ENST00000438594 MUC2Q02817 5179 aa1.62□□□□□ -2.15
HMGB1P12-201ENST00000438594 LOC730098B7Z3J9 87 aa1.62□□□□□ -2.15
HMGB1P12-201ENST00000438594 FXYD6P3P58550 94 aa1.62□□□□□ -2.15
HMGB1P12-201ENST00000438594 SNRPGP62308 76 aaKnown RBP1.62□□□□□ -2.15
HMGB1P12-201ENST00000438594 PRO3102Q9H379 93 aa1.62□□□□□ -2.15
HMGB1P12-201ENST00000438594 EYSQ5T1H1 3165 aa1.61□□□□□ -2.15
HMGB1P12-201ENST00000438594 PDE4DIPQ5VU43 2346 aa1.61□□□□□ -2.15
HMGB1P12-201ENST00000438594 MYO9AB2RTY4 2548 aa1.61□□□□□ -2.15
HMGB1P12-201ENST00000438594 CADP27708 2225 aa1.61□□□□□ -2.15
HMGB1P12-201ENST00000438594 ETDCA0A1B0GVM5 59 aa1.61□□□□□ -2.15
HMGB1P12-201ENST00000438594 SERF2P84101 59 aa1.61□□□□□ -2.15
HMGB1P12-201ENST00000438594 PCOTHQ58A44 107 aa1.61□□□□□ -2.15
HMGB1P12-201ENST00000438594 BRD3OSQ6XYD6 125 aa1.61□□□□□ -2.15
HMGB1P12-201ENST00000438594 KALRNO60229 2985 aa1.61□□□□□ -2.15
HMGB1P12-201ENST00000438594 ZFHX4Q86UP3 3567 aa1.6□□□□□ -2.15
HMGB1P12-201ENST00000438594 ZNF292O60281 2723 aa1.6□□□□□ -2.15
HMGB1P12-201ENST00000438594 PRUNE2Q8WUY3 3088 aa1.6□□□□□ -2.15
HMGB1P12-201ENST00000438594 CACNA1EQ15878 2313 aa1.6□□□□□ -2.15
HMGB1P12-201ENST00000438594 C5orf42Q9H799 3197 aa1.6□□□□□ -2.15
HMGB1P12-201ENST00000438594 SPEGQ15772 3267 aa1.6□□□□□ -2.15
HMGB1P12-201ENST00000438594 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.15
HMGB1P12-201ENST00000438594 LINC01546A6NGU7 62 aa1.59□□□□□ -2.15
HMGB1P12-201ENST00000438594 TNCP24821 2201 aa1.58□□□□□ -2.16
HMGB1P12-201ENST00000438594 ASCC3Q8N3C0 2202 aaKnown RBP1.58□□□□□ -2.16
HMGB1P12-201ENST00000438594 ASXL3Q9C0F0 2248 aa1.58□□□□□ -2.16
HMGB1P12-201ENST00000438594 CEP290O15078 2479 aa1.58□□□□□ -2.16
HMGB1P12-201ENST00000438594 SPTY2D1-AS1A0A0U1RR47 76 aa1.58□□□□□ -2.16
HMGB1P12-201ENST00000438594 ANGP03950 147 aaKnown RBP1.58□□□□□ -2.16
HMGB1P12-201ENST00000438594 LINC01590Q5TEZ4 76 aa1.58□□□□□ -2.16
HMGB1P12-201ENST00000438594 TECTAO75443 2155 aa1.58□□□□□ -2.16
HMGB1P12-201ENST00000438594 NBEAL2Q6ZNJ1 2754 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms